RNA–Protein interactions for RNA: ENST00000463244.6

CPSF7-209, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-209ENST00000463244 BLIDQ8IZY5 108 aa23.24■■□□□ 1.31
CPSF7-209ENST00000463244 RSAD1Q9HA92 442 aa23.24■■□□□ 1.31
CPSF7-209ENST00000463244 EP300Q09472 2414 aaPredicted RBP23.24■■□□□ 1.31
CPSF7-209ENST00000463244 SPDYE4A6NLX3 237 aa23.23■■□□□ 1.31
CPSF7-209ENST00000463244 KLRC2P26717 231 aa23.23■■□□□ 1.31
CPSF7-209ENST00000463244 AFF1P51825 1210 aaKnown RBP23.23■■□□□ 1.31
CPSF7-209ENST00000463244 SSRP1Q08945 709 aaKnown RBP23.23■■□□□ 1.31
CPSF7-209ENST00000463244 TDGQ13569 410 aa23.23■■□□□ 1.31
CPSF7-209ENST00000463244 NPY5RQ15761 445 aa23.23■■□□□ 1.31
CPSF7-209ENST00000463244 DAGLBQ8NCG7 672 aa23.23■■□□□ 1.31
CPSF7-209ENST00000463244 TMEM175Q9BSA9 504 aa23.23■■□□□ 1.31
CPSF7-209ENST00000463244 KANSL3Q9P2N6 904 aa23.23■■□□□ 1.31
CPSF7-209ENST00000463244 DDX25Q9UHL0 483 aaKnown RBP23.23■■□□□ 1.31
CPSF7-209ENST00000463244 CNTNAP2Q9UHC6 1331 aa23.23■■□□□ 1.31
CPSF7-209ENST00000463244 EML1O00423 815 aa23.22■■□□□ 1.31
CPSF7-209ENST00000463244 ALDH2P05091 517 aa23.22■■□□□ 1.31
CPSF7-209ENST00000463244 SSBP05455 408 aaKnown RBP eCLIP23.22■■□□□ 1.31
CPSF7-209ENST00000463244 HOXA11P31270 313 aaPredicted RBP23.22■■□□□ 1.31
CPSF7-209ENST00000463244 QARSP47897 775 aaKnown RBP23.22■■□□□ 1.31
CPSF7-209ENST00000463244 NPEPPSP55786 919 aa23.22■■□□□ 1.31
CPSF7-209ENST00000463244 C15orf39Q6ZRI6 1047 aa23.22■■□□□ 1.31
CPSF7-209ENST00000463244 FLCNQ8NFG4 579 aa23.22■■□□□ 1.31
CPSF7-209ENST00000463244 SLC7A3Q8WY07 619 aa23.22■■□□□ 1.31
CPSF7-209ENST00000463244 MINDY3Q9H8M7 445 aa23.22■■□□□ 1.31
CPSF7-209ENST00000463244 KCNK12Q9HB15 430 aa23.22■■□□□ 1.31
CPSF7-209ENST00000463244 MRPL17Q9NRX2 175 aaKnown RBP23.22■■□□□ 1.31
CPSF7-209ENST00000463244 DUSP12Q9UNI6 340 aa23.22■■□□□ 1.31
CPSF7-209ENST00000463244 DMXL1Q9Y485 3027 aa23.22■■□□□ 1.31
CPSF7-209ENST00000463244 SLC37A4O43826 429 aa23.21■■□□□ 1.31
CPSF7-209ENST00000463244 DEXIO95424 95 aa23.21■■□□□ 1.31
CPSF7-209ENST00000463244 NPR3P17342 541 aa23.21■■□□□ 1.31
CPSF7-209ENST00000463244 AOC1P19801 751 aa23.21■■□□□ 1.31
CPSF7-209ENST00000463244 PPP2R5CQ13362 524 aa23.21■■□□□ 1.31
CPSF7-209ENST00000463244 LETM2Q2VYF4 491 aa23.21■■□□□ 1.31
CPSF7-209ENST00000463244 UBXN11Q5T124 520 aa23.21■■□□□ 1.31
CPSF7-209ENST00000463244 GALNT17Q6IS24 598 aa23.21■■□□□ 1.31
CPSF7-209ENST00000463244 SRGAP1Q7Z6B7 1085 aa23.21■■□□□ 1.31
CPSF7-209ENST00000463244 FRMD5Q7Z6J6 570 aa23.21■■□□□ 1.31
CPSF7-209ENST00000463244 FAM177A1Q8N128 213 aaPredicted RBP23.21■■□□□ 1.31
CPSF7-209ENST00000463244 ZNF579Q8NAF0 562 aaKnown RBP23.21■■□□□ 1.31
CPSF7-209ENST00000463244 FAM193BQ96PV7 902 aaPredicted RBP23.21■■□□□ 1.31
CPSF7-209ENST00000463244 DHX33Q9H6R0 707 aaKnown RBP23.21■■□□□ 1.31
CPSF7-209ENST00000463244 VAV3Q9UKW4 847 aa23.21■■□□□ 1.31
CPSF7-209ENST00000463244 FAN1Q9Y2M0 1017 aa23.21■■□□□ 1.31
CPSF7-209ENST00000463244 PPME1Q9Y570 386 aa23.21■■□□□ 1.31
CPSF7-209ENST00000463244 DOCK8Q8NF50 2099 aa23.2■■□□□ 1.3
CPSF7-209ENST00000463244 NRP1O14786 923 aa23.2■■□□□ 1.3
CPSF7-209ENST00000463244 SOD2P04179 222 aa23.2■■□□□ 1.3
CPSF7-209ENST00000463244 TOB2Q14106 344 aaPredicted RBP23.2■■□□□ 1.3
CPSF7-209ENST00000463244 NONOQ15233 471 aaKnown RBP eCLIP23.2■■□□□ 1.3
CPSF7-209ENST00000463244 INF2Q27J81 1249 aa23.2■■□□□ 1.3
CPSF7-209ENST00000463244 EXOC8Q8IYI6 725 aa23.2■■□□□ 1.3
CPSF7-209ENST00000463244 CMASQ8NFW8 434 aaPredicted RBP23.2■■□□□ 1.3
CPSF7-209ENST00000463244 PRPF31Q8WWY3 499 aaKnown RBP23.2■■□□□ 1.3
CPSF7-209ENST00000463244 PSPC1Q8WXF1 523 aaKnown RBP23.2■■□□□ 1.3
CPSF7-209ENST00000463244 NKD2Q969F2 451 aaPredicted RBP23.2■■□□□ 1.3
CPSF7-209ENST00000463244 CEP170P1Q96L14 293 aa23.2■■□□□ 1.3
CPSF7-209ENST00000463244 WRAP73Q9P2S5 460 aaPredicted RBP23.2■■□□□ 1.3
CPSF7-209ENST00000463244 DNAH14Q0VDD8 3507 aa23.2■■□□□ 1.3
CPSF7-209ENST00000463244 CACNA1AO00555 2505 aa23.2■■□□□ 1.3
CPSF7-209ENST00000463244 PI15O43692 258 aa23.19■■□□□ 1.3
CPSF7-209ENST00000463244 DKC1O60832 514 aaKnown RBP eCLIP23.19■■□□□ 1.3
CPSF7-209ENST00000463244 POMCP01189 267 aa23.19■■□□□ 1.3
CPSF7-209ENST00000463244 SRGAP2CP0DJJ0 459 aa23.19■■□□□ 1.3
CPSF7-209ENST00000463244 LAMTOR4Q0VGL1 99 aa23.19■■□□□ 1.3
CPSF7-209ENST00000463244 TMEM143Q96AN5 459 aa23.19■■□□□ 1.3
CPSF7-209ENST00000463244 KCNMB3Q9NPA1 279 aa23.19■■□□□ 1.3
CPSF7-209ENST00000463244 MAN1C1Q9NR34 630 aa23.19■■□□□ 1.3
CPSF7-209ENST00000463244 MARCH5Q9NX47 278 aa23.19■■□□□ 1.3
CPSF7-209ENST00000463244 IGSF9Q9P2J2 1179 aa23.19■■□□□ 1.3
CPSF7-209ENST00000463244 ARID2Q68CP9 1835 aa23.18■■□□□ 1.3
CPSF7-209ENST00000463244 CPLX1O14810 134 aa23.18■■□□□ 1.3
CPSF7-209ENST00000463244 N4BP1O75113 896 aaKnown RBP23.18■■□□□ 1.3
CPSF7-209ENST00000463244 URODP06132 367 aa23.18■■□□□ 1.3
CPSF7-209ENST00000463244 P4HBP07237 508 aaKnown RBP23.18■■□□□ 1.3
CPSF7-209ENST00000463244 NCLP19338 710 aaKnown RBP23.18■■□□□ 1.3
CPSF7-209ENST00000463244 RFC5P40937 340 aa23.18■■□□□ 1.3
CPSF7-209ENST00000463244 FOXK2Q01167 660 aa23.18■■□□□ 1.3
CPSF7-209ENST00000463244 RUFY3Q7L099 469 aa23.18■■□□□ 1.3
CPSF7-209ENST00000463244 KRT25Q7Z3Z0 450 aa23.18■■□□□ 1.3
CPSF7-209ENST00000463244 CCDC105Q8IYK2 499 aa23.18■■□□□ 1.3
CPSF7-209ENST00000463244 FAM20AQ96MK3 541 aa23.18■■□□□ 1.3
CPSF7-209ENST00000463244 AIFM3Q96NN9 605 aa23.18■■□□□ 1.3
CPSF7-209ENST00000463244 RPS6KC1Q96S38 1066 aa23.18■■□□□ 1.3
CPSF7-209ENST00000463244 HERC2P3Q9BVR0 1158 aa23.18■■□□□ 1.3
CPSF7-209ENST00000463244 RHOBTB2Q9BYZ6 727 aa23.18■■□□□ 1.3
CPSF7-209ENST00000463244 FBXL21Q9UKT6 434 aa23.18■■□□□ 1.3
CPSF7-209ENST00000463244 TDRD15B5MCY1 1934 aaKnown RBP23.18■■□□□ 1.3
CPSF7-209ENST00000463244 C2CD2LO14523 706 aa23.17■■□□□ 1.3
CPSF7-209ENST00000463244 AK2P54819 239 aa23.17■■□□□ 1.3
CPSF7-209ENST00000463244 SIX5Q8N196 739 aa23.17■■□□□ 1.3
CPSF7-209ENST00000463244 SMG8Q8ND04 991 aaKnown RBP23.17■■□□□ 1.3
CPSF7-209ENST00000463244 CNNM3Q8NE01 707 aa23.17■■□□□ 1.3
CPSF7-209ENST00000463244 RTP3Q9BQQ7 232 aa23.17■■□□□ 1.3
CPSF7-209ENST00000463244 SLKQ9H2G2 1235 aaPredicted RBP23.17■■□□□ 1.3
CPSF7-209ENST00000463244 ZSWIM6Q9HCJ5 1215 aa23.17■■□□□ 1.3
CPSF7-209ENST00000463244 UBN1Q9NPG3 1134 aa23.17■■□□□ 1.3
CPSF7-209ENST00000463244 SSX2IPQ9Y2D8 614 aa23.17■■□□□ 1.3
CPSF7-209ENST00000463244 PRG3Q9Y2Y8 225 aaPredicted RBP23.17■■□□□ 1.3
CPSF7-209ENST00000463244 MTCL1Q9Y4B5 1905 aaKnown RBP23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms