RNA–Protein interactions for RNA: ENST00000462968.2

CD46-210, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 473 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-210ENST00000462968 ASB16Q96NS5 453 aa3.64□□□□□ -1.83
CD46-210ENST00000462968 CDK5RAP1Q96SZ6 601 aaKnown RBP3.64□□□□□ -1.83
CD46-210ENST00000462968 APBA2Q99767 749 aa3.64□□□□□ -1.83
CD46-210ENST00000462968 UPF3BQ9BZI7 483 aaKnown RBP3.64□□□□□ -1.83
CD46-210ENST00000462968 KLC2Q9H0B6 622 aa3.64□□□□□ -1.83
CD46-210ENST00000462968 MTIF3Q9H2K0 278 aaKnown RBP3.64□□□□□ -1.83
CD46-210ENST00000462968 C1orf115Q9H7X2 142 aa3.64□□□□□ -1.83
CD46-210ENST00000462968 MORF4L1Q9UBU8 362 aa3.64□□□□□ -1.83
CD46-210ENST00000462968 NUDCQ9Y266 331 aa3.64□□□□□ -1.83
CD46-210ENST00000462968 AK5Q9Y6K8 562 aa3.64□□□□□ -1.83
CD46-210ENST00000462968 NCOR1O75376 2440 aa3.64□□□□□ -1.83
CD46-210ENST00000462968 GAKO14976 1311 aa3.64□□□□□ -1.83
CD46-210ENST00000462968 ZNF521Q96K83 1311 aa3.64□□□□□ -1.83
CD46-210ENST00000462968 CHD9Q3L8U1 2897 aa3.64□□□□□ -1.83
CD46-210ENST00000462968 ATRNL1Q5VV63 1379 aa3.63□□□□□ -1.83
CD46-210ENST00000462968 CACNA1GO43497 2377 aa3.63□□□□□ -1.83
CD46-210ENST00000462968 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP3.63□□□□□ -1.83
CD46-210ENST00000462968 A0A1W2PQ27 194 aa3.63□□□□□ -1.83
CD46-210ENST00000462968 A0A1W2PQ64 194 aa3.63□□□□□ -1.83
CD46-210ENST00000462968 A0A1W2PQC6 194 aa3.63□□□□□ -1.83
CD46-210ENST00000462968 A0A1W2PQD8 194 aa3.63□□□□□ -1.83
CD46-210ENST00000462968 TRIM75PA6NK02 468 aa3.63□□□□□ -1.83
CD46-210ENST00000462968 PQBP1O60828 265 aaKnown RBP3.63□□□□□ -1.83
CD46-210ENST00000462968 P4HBP07237 508 aaKnown RBP3.63□□□□□ -1.83
CD46-210ENST00000462968 CHRNDQ07001 517 aa3.63□□□□□ -1.83
CD46-210ENST00000462968 RAD51AP2Q09MP3 1159 aa3.63□□□□□ -1.83
CD46-210ENST00000462968 LEXMQ3ZCV2 418 aa3.63□□□□□ -1.83
CD46-210ENST00000462968 ARSHQ5FYA8 562 aa3.63□□□□□ -1.83
CD46-210ENST00000462968 CRTC3Q6UUV7 619 aa3.63□□□□□ -1.83
CD46-210ENST00000462968 ZNF365Q70YC5 407 aa3.63□□□□□ -1.83
CD46-210ENST00000462968 ASCL5Q7RTU5 278 aa3.63□□□□□ -1.83
CD46-210ENST00000462968 DGLUCYQ7Z3D6 616 aa3.63□□□□□ -1.83
CD46-210ENST00000462968 ANKRD33Q7Z3H0 272 aa3.63□□□□□ -1.83
CD46-210ENST00000462968 GPR142Q7Z601 462 aa3.63□□□□□ -1.83
CD46-210ENST00000462968 PLEKHH3Q7Z736 793 aa3.63□□□□□ -1.83
CD46-210ENST00000462968 ZSCAN29Q8IWY8 852 aaPredicted RBP3.63□□□□□ -1.83
CD46-210ENST00000462968 SUGP1Q8IWZ8 645 aaKnown RBP3.63□□□□□ -1.83
CD46-210ENST00000462968 TMEM199Q8N511 208 aa3.63□□□□□ -1.83
CD46-210ENST00000462968 DNERQ8NFT8 737 aa3.63□□□□□ -1.83
CD46-210ENST00000462968 ALG3Q92685 438 aa3.63□□□□□ -1.83
CD46-210ENST00000462968 TEKT1Q969V4 418 aa3.63□□□□□ -1.83
CD46-210ENST00000462968 FERMT2Q96AC1 680 aa3.63□□□□□ -1.83
CD46-210ENST00000462968 TSPAN17Q96FV3 270 aa3.63□□□□□ -1.83
CD46-210ENST00000462968 ZDHHC15Q96MV8 337 aa3.63□□□□□ -1.83
CD46-210ENST00000462968 MPHOSPH8Q99549 860 aa3.63□□□□□ -1.83
CD46-210ENST00000462968 ANTXR1Q9H6X2 564 aa3.63□□□□□ -1.83
CD46-210ENST00000462968 GREM2Q9H772 168 aa3.63□□□□□ -1.83
CD46-210ENST00000462968 XPO5Q9HAV4 1204 aaKnown RBP eCLIP3.63□□□□□ -1.83
CD46-210ENST00000462968 FAM86C1Q9NVL1 165 aa3.63□□□□□ -1.83
CD46-210ENST00000462968 GFOD1Q9NXC2 390 aa3.63□□□□□ -1.83
CD46-210ENST00000462968 PRR13Q9NZ81 148 aa3.63□□□□□ -1.83
CD46-210ENST00000462968 C11orf21Q9P2W6 132 aa3.63□□□□□ -1.83
CD46-210ENST00000462968 DBF4Q9UBU7 674 aaPredicted RBP3.63□□□□□ -1.83
CD46-210ENST00000462968 TSPYL4Q9UJ04 414 aa3.63□□□□□ -1.83
CD46-210ENST00000462968 GNEQ9Y223 722 aaKnown RBP3.63□□□□□ -1.83
CD46-210ENST00000462968 PSME4Q14997 1843 aa3.63□□□□□ -1.83
CD46-210ENST00000462968 CHD8Q9HCK8 2581 aa3.62□□□□□ -1.83
CD46-210ENST00000462968 REV3LO60673 3130 aa3.62□□□□□ -1.83
CD46-210ENST00000462968 CHD7Q9P2D1 2997 aa3.62□□□□□ -1.83
CD46-210ENST00000462968 LAMB2P55268 1798 aa3.62□□□□□ -1.83
CD46-210ENST00000462968 PRR23AA6NEV1 266 aa3.62□□□□□ -1.83
CD46-210ENST00000462968 SNAP23O00161 211 aa3.62□□□□□ -1.83
CD46-210ENST00000462968 MEIS1O00470 390 aa3.62□□□□□ -1.83
CD46-210ENST00000462968 SEPT4O43236 478 aa3.62□□□□□ -1.83
CD46-210ENST00000462968 GLRX3O76003 335 aaKnown RBP3.62□□□□□ -1.83
CD46-210ENST00000462968 FGBP02675 491 aa3.62□□□□□ -1.83
CD46-210ENST00000462968 PF4P02776 101 aa3.62□□□□□ -1.83
CD46-210ENST00000462968 LDHBP07195 334 aaKnown RBP3.62□□□□□ -1.83
CD46-210ENST00000462968 GLI4P10075 376 aa3.62□□□□□ -1.83
CD46-210ENST00000462968 IL9P15248 144 aa3.62□□□□□ -1.83
CD46-210ENST00000462968 CSF2RAP15509 400 aa3.62□□□□□ -1.83
CD46-210ENST00000462968 POLR2BP30876 1174 aaKnown RBP3.62□□□□□ -1.83
CD46-210ENST00000462968 CORO7P57737 925 aa3.62□□□□□ -1.83
CD46-210ENST00000462968 LRRC41Q15345 812 aa3.62□□□□□ -1.83
CD46-210ENST00000462968 SMN1Q16637 294 aaKnown RBP3.62□□□□□ -1.83
CD46-210ENST00000462968 ST3GAL2Q16842 350 aa3.62□□□□□ -1.83
CD46-210ENST00000462968 FAM26FQ5R3K3 315 aa3.62□□□□□ -1.83
CD46-210ENST00000462968 KRT40Q6A162 431 aa3.62□□□□□ -1.83
CD46-210ENST00000462968 APOBEC3HQ6NTF7 200 aaKnown RBP3.62□□□□□ -1.83
CD46-210ENST00000462968 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.62□□□□□ -1.83
CD46-210ENST00000462968 ZBTB8AQ96BR9 441 aa3.62□□□□□ -1.83
CD46-210ENST00000462968 RHOVQ96L33 236 aa3.62□□□□□ -1.83
CD46-210ENST00000462968 CFAP53Q96M91 514 aa3.62□□□□□ -1.83
CD46-210ENST00000462968 SLC12A9Q9BXP2 914 aa3.62□□□□□ -1.83
CD46-210ENST00000462968 SRRTQ9BXP5 876 aaKnown RBP3.62□□□□□ -1.83
CD46-210ENST00000462968 BCAS3Q9H6U6 928 aa3.62□□□□□ -1.83
CD46-210ENST00000462968 UBE2ZQ9H832 354 aaPredicted RBP3.62□□□□□ -1.83
CD46-210ENST00000462968 BABAM1Q9NWV8 329 aa3.62□□□□□ -1.83
CD46-210ENST00000462968 HYPKQ9NX55 129 aa3.62□□□□□ -1.83
CD46-210ENST00000462968 CWC25Q9NXE8 425 aaPredicted RBP3.62□□□□□ -1.83
CD46-210ENST00000462968 FLRT1Q9NZU1 646 aa3.62□□□□□ -1.83
CD46-210ENST00000462968 PPP4R1LQ9P1A2 415 aa3.62□□□□□ -1.83
CD46-210ENST00000462968 CHPF2Q9P2E5 772 aa3.62□□□□□ -1.83
CD46-210ENST00000462968 PRKAG3Q9UGI9 489 aa3.62□□□□□ -1.83
CD46-210ENST00000462968 CFAP47Q6ZTR5 3102 aa3.62□□□□□ -1.83
CD46-210ENST00000462968 OTOFQ9HC10 1997 aa3.62□□□□□ -1.83
CD46-210ENST00000462968 LTBP2Q14767 1821 aa3.61□□□□□ -1.83
CD46-210ENST00000462968 A0A1W2PQJ5 194 aa3.61□□□□□ -1.83
CD46-210ENST00000462968 MROH6A6NGR9 719 aa3.61□□□□□ -1.83
CD46-210ENST00000462968 H0Y858 1186 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms