RNA–Protein interactions for RNA: ENST00000462787.5

SMC4-204, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 5,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-204ENST00000462787 CELF4Q9BZC1 486 aaKnown RBP16.82■□□□□ 0.28
SMC4-204ENST00000462787 SEL1LQ9UBV2 794 aa16.82■□□□□ 0.28
SMC4-204ENST00000462787 TTC7AQ9ULT0 858 aaPredicted RBP16.82■□□□□ 0.28
SMC4-204ENST00000462787 ADGRB3O60242 1522 aa16.82■□□□□ 0.28
SMC4-204ENST00000462787 RTN2O75298 545 aa16.82■□□□□ 0.28
SMC4-204ENST00000462787 SYF2O95926 243 aaKnown RBP16.82■□□□□ 0.28
SMC4-204ENST00000462787 ZBED1O96006 694 aa16.82■□□□□ 0.28
SMC4-204ENST00000462787 TMEM253P0C7T8 217 aa16.82■□□□□ 0.28
SMC4-204ENST00000462787 AP1B1Q10567 949 aa16.82■□□□□ 0.28
SMC4-204ENST00000462787 RFX8Q6ZV50 586 aa16.82■□□□□ 0.28
SMC4-204ENST00000462787 NSL1Q96IY1 281 aa16.82■□□□□ 0.28
SMC4-204ENST00000462787 TMEM47Q9BQJ4 181 aa16.82■□□□□ 0.28
SMC4-204ENST00000462787 DCLRE1BQ9H816 532 aa16.82■□□□□ 0.28
SMC4-204ENST00000462787 SMYD2Q9NRG4 433 aa16.82■□□□□ 0.28
SMC4-204ENST00000462787 G3BP2Q9UN86 482 aaKnown RBP16.82■□□□□ 0.28
SMC4-204ENST00000462787 KITP10721 976 aa16.82■□□□□ 0.28
SMC4-204ENST00000462787 SLC1A1P43005 524 aa16.82■□□□□ 0.28
SMC4-204ENST00000462787 KYNUQ16719 465 aa16.82■□□□□ 0.28
SMC4-204ENST00000462787 ACAD11Q709F0 780 aa16.82■□□□□ 0.28
SMC4-204ENST00000462787 SPDYE1Q8NFV5 336 aaPredicted RBP16.82■□□□□ 0.28
SMC4-204ENST00000462787 CARD9Q9H257 536 aa16.82■□□□□ 0.28
SMC4-204ENST00000462787 BTG4Q9NY30 223 aa16.82■□□□□ 0.28
SMC4-204ENST00000462787 SRBD1Q8N5C6 995 aaKnown RBP16.81■□□□□ 0.28
SMC4-204ENST00000462787 MTBPQ96DY7 904 aa16.81■□□□□ 0.28
SMC4-204ENST00000462787 TRPV6Q9H1D0 765 aa16.81■□□□□ 0.28
SMC4-204ENST00000462787 CHCHD3Q9NX63 227 aaKnown RBP16.81■□□□□ 0.28
SMC4-204ENST00000462787 TTLL3Q9Y4R7 772 aa16.81■□□□□ 0.28
SMC4-204ENST00000462787 DUSP10Q9Y6W6 482 aa16.81■□□□□ 0.28
SMC4-204ENST00000462787 ERBB3P21860 1342 aa16.81■□□□□ 0.28
SMC4-204ENST00000462787 KPNA7A9QM74 516 aa16.81■□□□□ 0.28
SMC4-204ENST00000462787 DNAJC6O75061 913 aa16.81■□□□□ 0.28
SMC4-204ENST00000462787 GTF2IP78347 998 aa16.81■□□□□ 0.28
SMC4-204ENST00000462787 CNGA3Q16281 694 aa16.81■□□□□ 0.28
SMC4-204ENST00000462787 KCTD1Q719H9 257 aa16.81■□□□□ 0.28
SMC4-204ENST00000462787 XXYLT1Q8NBI6 393 aa16.81■□□□□ 0.28
SMC4-204ENST00000462787 ACTRT1Q8TDG2 376 aa16.81■□□□□ 0.28
SMC4-204ENST00000462787 KIFC3Q9BVG8 833 aa16.81■□□□□ 0.28
SMC4-204ENST00000462787 TRPC5Q9UL62 973 aaPredicted RBP16.81■□□□□ 0.28
SMC4-204ENST00000462787 LEMD3Q9Y2U8 911 aa16.81■□□□□ 0.28
SMC4-204ENST00000462787 OVOS2A0A0G2JMS6 1433 aa16.81■□□□□ 0.28
SMC4-204ENST00000462787 SCARF1Q14162 830 aa16.81■□□□□ 0.28
SMC4-204ENST00000462787 NT5DC1Q5TFE4 455 aa16.81■□□□□ 0.28
SMC4-204ENST00000462787 KIRREL3Q8IZU9 778 aa16.81■□□□□ 0.28
SMC4-204ENST00000462787 NGLY1Q96IV0 654 aa16.81■□□□□ 0.28
SMC4-204ENST00000462787 UTYO14607 1347 aa16.81■□□□□ 0.28
SMC4-204ENST00000462787 ZFXP17010 805 aaPredicted RBP16.81■□□□□ 0.28
SMC4-204ENST00000462787 SLC16A2P36021 539 aa16.81■□□□□ 0.28
SMC4-204ENST00000462787 YARSP54577 528 aaKnown RBP16.81■□□□□ 0.28
SMC4-204ENST00000462787 EDRF1Q3B7T1 1238 aa16.81■□□□□ 0.28
SMC4-204ENST00000462787 METTL13Q8N6R0 699 aa16.81■□□□□ 0.28
SMC4-204ENST00000462787 PROCA1Q8NCQ7 364 aaPredicted RBP16.81■□□□□ 0.28
SMC4-204ENST00000462787 UVRAGQ9P2Y5 699 aa16.81■□□□□ 0.28
SMC4-204ENST00000462787 ENO1P06733 434 aaKnown RBP16.8■□□□□ 0.28
SMC4-204ENST00000462787 UBTFL6P0CB48 400 aaPredicted RBP16.8■□□□□ 0.28
SMC4-204ENST00000462787 CDK8P49336 464 aa16.8■□□□□ 0.28
SMC4-204ENST00000462787 PRPSAP1Q14558 356 aa16.8■□□□□ 0.28
SMC4-204ENST00000462787 AGXT2Q9BYV1 514 aa16.8■□□□□ 0.28
SMC4-204ENST00000462787 PSMC3IPQ9P2W1 217 aaPredicted RBP16.8■□□□□ 0.28
SMC4-204ENST00000462787 TESPA1A2RU30 521 aaPredicted RBP16.8■□□□□ 0.28
SMC4-204ENST00000462787 FAM20AQ96MK3 541 aa16.8■□□□□ 0.28
SMC4-204ENST00000462787 RBM15Q96T37 977 aaKnown RBP eCLIP16.8■□□□□ 0.285e-67■■■■■ 212.6
SMC4-204ENST00000462787 KAT6BQ8WYB5 2073 aa16.8■□□□□ 0.28
SMC4-204ENST00000462787 POTEB3A0JP26 581 aa16.8■□□□□ 0.28
SMC4-204ENST00000462787 POTECB2RU33 542 aa16.8■□□□□ 0.28
SMC4-204ENST00000462787 POTEBQ6S5H4 581 aa16.8■□□□□ 0.28
SMC4-204ENST00000462787 TBC1D23Q9NUY8 699 aa16.8■□□□□ 0.28
SMC4-204ENST00000462787 UBOX5O94941 541 aa16.8■□□□□ 0.28
SMC4-204ENST00000462787 GLI1P08151 1106 aa16.8■□□□□ 0.28
SMC4-204ENST00000462787 PLEKP08567 350 aaPredicted RBP16.8■□□□□ 0.28
SMC4-204ENST00000462787 GCLMP48507 274 aa16.8■□□□□ 0.28
SMC4-204ENST00000462787 TFDP2Q14188 446 aa16.8■□□□□ 0.28
SMC4-204ENST00000462787 SPOPLQ6IQ16 392 aa16.8■□□□□ 0.28
SMC4-204ENST00000462787 RAB44Q7Z6P3 723 aaPredicted RBP16.8■□□□□ 0.28
SMC4-204ENST00000462787 MFN1Q8IWA4 741 aa16.8■□□□□ 0.28
SMC4-204ENST00000462787 GOLGA8MH3BSY2 632 aa16.79■□□□□ 0.28
SMC4-204ENST00000462787 GNGT2O14610 69 aa16.79■□□□□ 0.28
SMC4-204ENST00000462787 KDSRQ06136 332 aa16.79■□□□□ 0.28
SMC4-204ENST00000462787 PPM1NQ8N819 430 aa16.79■□□□□ 0.28
SMC4-204ENST00000462787 ATP6V0A1Q93050 837 aa16.79■□□□□ 0.28
SMC4-204ENST00000462787 RNF25Q96BH1 459 aaPredicted RBP16.79■□□□□ 0.28
SMC4-204ENST00000462787 MAGEB18Q96M61 343 aa16.79■□□□□ 0.28
SMC4-204ENST00000462787 ZNF277Q9NRM2 450 aaPredicted RBP16.79■□□□□ 0.28
SMC4-204ENST00000462787 IQGAP1P46940 1657 aa16.79■□□□□ 0.28
SMC4-204ENST00000462787 HPS3Q969F9 1004 aa16.79■□□□□ 0.28
SMC4-204ENST00000462787 BTBD6Q96KE9 485 aa16.79■□□□□ 0.28
SMC4-204ENST00000462787 CYP4F11Q9HBI6 524 aa16.79■□□□□ 0.28
SMC4-204ENST00000462787 SFI1A8K8P3 1242 aa16.79■□□□□ 0.28
SMC4-204ENST00000462787 WDR64B1ANS9 1081 aa16.79■□□□□ 0.28
SMC4-204ENST00000462787 PRPSAP2O60256 369 aa16.79■□□□□ 0.28
SMC4-204ENST00000462787 CTTNQ14247 550 aaKnown RBP16.79■□□□□ 0.28
SMC4-204ENST00000462787 ZNF746Q6NUN9 644 aaPredicted RBP16.79■□□□□ 0.28
SMC4-204ENST00000462787 TPCN2Q8NHX9 752 aa16.79■□□□□ 0.28
SMC4-204ENST00000462787 KANSL2Q9H9L4 492 aa16.79■□□□□ 0.28
SMC4-204ENST00000462787 RXFP1Q9HBX9 757 aa16.79■□□□□ 0.28
SMC4-204ENST00000462787 LRRIQ4A6NIV6 560 aa16.79■□□□□ 0.28
SMC4-204ENST00000462787 SH3BP5O60239 455 aa16.79■□□□□ 0.28
SMC4-204ENST00000462787 CALB1P05937 261 aa16.79■□□□□ 0.28
SMC4-204ENST00000462787 SARSP49591 514 aaKnown RBP16.79■□□□□ 0.28
SMC4-204ENST00000462787 VAMP7P51809 220 aa16.79■□□□□ 0.28
SMC4-204ENST00000462787 HIF1AQ16665 826 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms