RNA–Protein interactions for RNA: ENST00000461009.1

RAB11FIP3-207, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 514 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-207ENST00000461009 CSRNP2Q9H175 543 aa14.67□□□□□ -0.06
RAB11FIP3-207ENST00000461009 BHMT2Q9H2M3 363 aa14.67□□□□□ -0.06
RAB11FIP3-207ENST00000461009 TLE6Q9H808 572 aa14.67□□□□□ -0.06
RAB11FIP3-207ENST00000461009 TLR9Q9NR96 1032 aa14.67□□□□□ -0.06
RAB11FIP3-207ENST00000461009 BMP2KQ9NSY1 1161 aaPredicted RBP14.67□□□□□ -0.06
RAB11FIP3-207ENST00000461009 CCDC39Q9UFE4 941 aa14.67□□□□□ -0.06
RAB11FIP3-207ENST00000461009 E9PMD0 336 aa14.66□□□□□ -0.06
RAB11FIP3-207ENST00000461009 PPP6R2O75170 966 aa14.66□□□□□ -0.06
RAB11FIP3-207ENST00000461009 SRGAP2BP0DMP2 458 aa14.66□□□□□ -0.06
RAB11FIP3-207ENST00000461009 FGFR4P22455 802 aa14.66□□□□□ -0.06
RAB11FIP3-207ENST00000461009 RAB27AP51159 221 aa14.66□□□□□ -0.06
RAB11FIP3-207ENST00000461009 NUCB2P80303 420 aa14.66□□□□□ -0.06
RAB11FIP3-207ENST00000461009 POU5F1BQ06416 359 aa14.66□□□□□ -0.06
RAB11FIP3-207ENST00000461009 CTC1Q2NKJ3 1217 aa14.66□□□□□ -0.06
RAB11FIP3-207ENST00000461009 FOXD4L6Q3SYB3 417 aaPredicted RBP14.66□□□□□ -0.06
RAB11FIP3-207ENST00000461009 FOXD4L3Q6VB84 417 aaPredicted RBP14.66□□□□□ -0.06
RAB11FIP3-207ENST00000461009 SRGAP1Q7Z6B7 1085 aa14.66□□□□□ -0.06
RAB11FIP3-207ENST00000461009 FAM178BQ8IXR5 827 aa14.66□□□□□ -0.06
RAB11FIP3-207ENST00000461009 GJD3Q8N144 294 aa14.66□□□□□ -0.06
RAB11FIP3-207ENST00000461009 PGBD4Q96DM1 585 aa14.66□□□□□ -0.06
RAB11FIP3-207ENST00000461009 ZNF558Q96NG5 402 aa14.66□□□□□ -0.06
RAB11FIP3-207ENST00000461009 CASD1Q96PB1 797 aa14.66□□□□□ -0.06
RAB11FIP3-207ENST00000461009 CDCA3Q99618 268 aaPredicted RBP14.66□□□□□ -0.06
RAB11FIP3-207ENST00000461009 XPNPEP1Q9NQW7 623 aa14.66□□□□□ -0.06
RAB11FIP3-207ENST00000461009 PRKAG3Q9UGI9 489 aa14.66□□□□□ -0.06
RAB11FIP3-207ENST00000461009 FBXO2Q9UK22 296 aaPredicted RBP14.66□□□□□ -0.06
RAB11FIP3-207ENST00000461009 PIN4Q9Y237 131 aaKnown RBP14.66□□□□□ -0.06
RAB11FIP3-207ENST00000461009 LZTS1Q9Y250 596 aa14.66□□□□□ -0.06
RAB11FIP3-207ENST00000461009 REV3LO60673 3130 aa14.65□□□□□ -0.06
RAB11FIP3-207ENST00000461009 TTC28Q96AY4 2481 aa14.65□□□□□ -0.06
RAB11FIP3-207ENST00000461009 IL9P15248 144 aa14.65□□□□□ -0.06
RAB11FIP3-207ENST00000461009 ARL2P36404 184 aa14.65□□□□□ -0.06
RAB11FIP3-207ENST00000461009 PHKA2P46019 1235 aa14.65□□□□□ -0.06
RAB11FIP3-207ENST00000461009 ALDH7A1P49419 539 aaKnown RBP14.65□□□□□ -0.06
RAB11FIP3-207ENST00000461009 ADAM15Q13444 863 aa14.65□□□□□ -0.06
RAB11FIP3-207ENST00000461009 PCBP1Q15365 356 aaKnown RBP eCLIP14.65□□□□□ -0.06
RAB11FIP3-207ENST00000461009 MAEAQ7L5Y9 396 aa14.65□□□□□ -0.06
RAB11FIP3-207ENST00000461009 KSR1Q8IVT5 923 aa14.65□□□□□ -0.06
RAB11FIP3-207ENST00000461009 RNF149Q8NC42 400 aa14.65□□□□□ -0.06
RAB11FIP3-207ENST00000461009 KCNG4Q8TDN1 519 aa14.65□□□□□ -0.06
RAB11FIP3-207ENST00000461009 IFT74Q96LB3 600 aa14.65□□□□□ -0.06
RAB11FIP3-207ENST00000461009 PNMA5Q96PV4 448 aa14.65□□□□□ -0.06
RAB11FIP3-207ENST00000461009 POP1Q99575 1024 aaKnown RBP14.65□□□□□ -0.06
RAB11FIP3-207ENST00000461009 TIPINQ9BVW5 301 aa14.65□□□□□ -0.06
RAB11FIP3-207ENST00000461009 TRAIPQ9BWF2 469 aa14.65□□□□□ -0.06
RAB11FIP3-207ENST00000461009 POLR3FQ9H1D9 316 aaPredicted RBP14.65□□□□□ -0.06
RAB11FIP3-207ENST00000461009 CWH43Q9H720 699 aa14.65□□□□□ -0.06
RAB11FIP3-207ENST00000461009 SPG21Q9NZD8 308 aa14.65□□□□□ -0.06
RAB11FIP3-207ENST00000461009 CD207Q9UJ71 328 aa14.65□□□□□ -0.06
RAB11FIP3-207ENST00000461009 XIRP2A4UGR9 3374 aa14.65□□□□□ -0.06
RAB11FIP3-207ENST00000461009 FNDC1Q4ZHG4 1894 aaPredicted RBP14.64□□□□□ -0.07
RAB11FIP3-207ENST00000461009 CSDE1O75534 798 aaKnown RBP14.64□□□□□ -0.07
RAB11FIP3-207ENST00000461009 SSBP05455 408 aaKnown RBP eCLIP14.64□□□□□ -0.07
RAB11FIP3-207ENST00000461009 ALADP13716 330 aa14.64□□□□□ -0.07
RAB11FIP3-207ENST00000461009 DNAJB1P25685 340 aa14.64□□□□□ -0.07
RAB11FIP3-207ENST00000461009 NRIP1P48552 1158 aa14.64□□□□□ -0.07
RAB11FIP3-207ENST00000461009 KRT85P78386 507 aa14.64□□□□□ -0.07
RAB11FIP3-207ENST00000461009 PLCB3Q01970 1234 aa14.64□□□□□ -0.07
RAB11FIP3-207ENST00000461009 DNM1Q05193 864 aaKnown RBP14.64□□□□□ -0.07
RAB11FIP3-207ENST00000461009 GRIN1Q05586 938 aa14.64□□□□□ -0.07
RAB11FIP3-207ENST00000461009 CAMK1Q14012 370 aa14.64□□□□□ -0.07
RAB11FIP3-207ENST00000461009 PPP2R5AQ15172 486 aa14.64□□□□□ -0.07
RAB11FIP3-207ENST00000461009 TMEM119Q4V9L6 283 aa14.64□□□□□ -0.07
RAB11FIP3-207ENST00000461009 KCNT2Q6UVM3 1135 aa14.64□□□□□ -0.07
RAB11FIP3-207ENST00000461009 GLB1LQ6UWU2 654 aa14.64□□□□□ -0.07
RAB11FIP3-207ENST00000461009 RBM23Q86U06 439 aaKnown RBP14.64□□□□□ -0.07
RAB11FIP3-207ENST00000461009 EFHBQ8N7U6 833 aa14.64□□□□□ -0.07
RAB11FIP3-207ENST00000461009 SYT2Q8N9I0 419 aaPredicted RBP14.64□□□□□ -0.07
RAB11FIP3-207ENST00000461009 TMEM87AQ8NBN3 555 aa14.64□□□□□ -0.07
RAB11FIP3-207ENST00000461009 HELQQ8TDG4 1101 aa14.64□□□□□ -0.07
RAB11FIP3-207ENST00000461009 MRPS27Q92552 414 aaKnown RBP14.64□□□□□ -0.07
RAB11FIP3-207ENST00000461009 KIFAP3Q92845 792 aa14.64□□□□□ -0.07
RAB11FIP3-207ENST00000461009 PLIN2Q99541 437 aa14.64□□□□□ -0.07
RAB11FIP3-207ENST00000461009 NGRNQ9NPE2 291 aaKnown RBP14.64□□□□□ -0.07
RAB11FIP3-207ENST00000461009 ENTPD7Q9NQZ7 604 aa14.64□□□□□ -0.07
RAB11FIP3-207ENST00000461009 KCND2Q9NZV8 630 aa14.64□□□□□ -0.07
RAB11FIP3-207ENST00000461009 KCNG1Q9UIX4 513 aa14.64□□□□□ -0.07
RAB11FIP3-207ENST00000461009 SPTBN5Q9NRC6 3674 aaKnown RBP14.63□□□□□ -0.07
RAB11FIP3-207ENST00000461009 CUTAO60888 179 aa14.63□□□□□ -0.07
RAB11FIP3-207ENST00000461009 ERLIN2O94905 339 aa14.63□□□□□ -0.07
RAB11FIP3-207ENST00000461009 PLA2G4BP0C869 781 aa14.63□□□□□ -0.07
RAB11FIP3-207ENST00000461009 NCLP19338 710 aaKnown RBP14.63□□□□□ -0.07
RAB11FIP3-207ENST00000461009 GLRA2P23416 452 aa14.63□□□□□ -0.07
RAB11FIP3-207ENST00000461009 IRS1P35568 1242 aa14.63□□□□□ -0.07
RAB11FIP3-207ENST00000461009 DDIT3P35638 169 aa14.63□□□□□ -0.07
RAB11FIP3-207ENST00000461009 LTBRP36941 435 aa14.63□□□□□ -0.07
RAB11FIP3-207ENST00000461009 PTENP60484 403 aa14.63□□□□□ -0.07
RAB11FIP3-207ENST00000461009 RNASELQ05823 741 aaKnown RBP14.63□□□□□ -0.07
RAB11FIP3-207ENST00000461009 SMAD4Q13485 552 aaKnown RBP14.63□□□□□ -0.07
RAB11FIP3-207ENST00000461009 CLUL1Q15846 466 aa14.63□□□□□ -0.07
RAB11FIP3-207ENST00000461009 SPECC1Q5M775 1068 aa14.63□□□□□ -0.07
RAB11FIP3-207ENST00000461009 RRAGBQ5VZM2 374 aa14.63□□□□□ -0.07
RAB11FIP3-207ENST00000461009 RINT1Q6NUQ1 792 aa14.63□□□□□ -0.07
RAB11FIP3-207ENST00000461009 URGCPQ8TCY9 931 aa14.63□□□□□ -0.07
RAB11FIP3-207ENST00000461009 EPSTI1Q96J88 318 aa14.63□□□□□ -0.07
RAB11FIP3-207ENST00000461009 CLIC6Q96NY7 704 aa14.63□□□□□ -0.07
RAB11FIP3-207ENST00000461009 IFT122Q9HBG6 1241 aa14.63□□□□□ -0.07
RAB11FIP3-207ENST00000461009 FAM105AQ9NUU6 356 aa14.63□□□□□ -0.07
RAB11FIP3-207ENST00000461009 ZDHHC9Q9Y397 364 aa14.63□□□□□ -0.07
RAB11FIP3-207ENST00000461009 TCHHQ07283 1943 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms