RNA–Protein interactions for RNA: ENST00000460962.5

GCOM1-203, Transcript of GRINL1A complex locus 1, humanhuman

TSL 2

Gene GCOM1, Length 3,156 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCOM1-203ENST00000460962 GRHL1Q9NZI5 618 aa13.05□□□□□ -0.32
GCOM1-203ENST00000460962 PARP2Q9UGN5 583 aa13.05□□□□□ -0.32
GCOM1-203ENST00000460962 BCS1LQ9Y276 419 aa13.05□□□□□ -0.32
GCOM1-203ENST00000460962 GH2P01242 217 aa13.04□□□□□ -0.32
GCOM1-203ENST00000460962 PTGIRP43119 386 aa13.04□□□□□ -0.32
GCOM1-203ENST00000460962 MMP13P45452 471 aa13.04□□□□□ -0.32
GCOM1-203ENST00000460962 RPL21P46778 160 aaKnown RBP13.04□□□□□ -0.32
GCOM1-203ENST00000460962 GPC5P78333 572 aa13.04□□□□□ -0.32
GCOM1-203ENST00000460962 LACTB2Q53H82 288 aaPredicted RBP13.04□□□□□ -0.32
GCOM1-203ENST00000460962 FUKQ8N0W3 1084 aa13.04□□□□□ -0.32
GCOM1-203ENST00000460962 CCT6BQ92526 530 aa13.04□□□□□ -0.32
GCOM1-203ENST00000460962 SLC5A5Q92911 643 aa13.04□□□□□ -0.32
GCOM1-203ENST00000460962 ZKSCAN4Q969J2 545 aaPredicted RBP13.04□□□□□ -0.32
GCOM1-203ENST00000460962 IDI2Q9BXS1 227 aa13.04□□□□□ -0.32
GCOM1-203ENST00000460962 TMX4Q9H1E5 349 aaPredicted RBP13.04□□□□□ -0.32
GCOM1-203ENST00000460962 DBNDD1Q9H9R9 158 aa13.04□□□□□ -0.32
GCOM1-203ENST00000460962 KCND2Q9NZV8 630 aa13.04□□□□□ -0.32
GCOM1-203ENST00000460962 SIPA1L1O43166 1804 aa13.04□□□□□ -0.32
GCOM1-203ENST00000460962 EMSYQ7Z589 1322 aa13.04□□□□□ -0.32
GCOM1-203ENST00000460962 RPTORQ8N122 1335 aa13.04□□□□□ -0.32
GCOM1-203ENST00000460962 ARHGEF35A5YM69 484 aa13.04□□□□□ -0.32
GCOM1-203ENST00000460962 ADCY2Q08462 1091 aa13.04□□□□□ -0.32
GCOM1-203ENST00000460962 MESDQ14696 234 aa13.04□□□□□ -0.32
GCOM1-203ENST00000460962 SNCBQ16143 134 aa13.04□□□□□ -0.32
GCOM1-203ENST00000460962 C6orf118Q5T5N4 469 aa13.04□□□□□ -0.32
GCOM1-203ENST00000460962 ZNF746Q6NUN9 644 aaPredicted RBP13.04□□□□□ -0.32
GCOM1-203ENST00000460962 CCDC137Q6PK04 289 aaKnown RBP13.04□□□□□ -0.32
GCOM1-203ENST00000460962 BTNL9Q6UXG8 535 aa13.04□□□□□ -0.32
GCOM1-203ENST00000460962 CROCCP2Q86T23 111 aa13.04□□□□□ -0.32
GCOM1-203ENST00000460962 PARP9Q8IXQ6 854 aa13.04□□□□□ -0.32
GCOM1-203ENST00000460962 BANK1Q8NDB2 785 aa13.04□□□□□ -0.32
GCOM1-203ENST00000460962 LMO3Q8TAP4 145 aa13.04□□□□□ -0.32
GCOM1-203ENST00000460962 UHMK1Q8TAS1 419 aaKnown RBP13.04□□□□□ -0.32
GCOM1-203ENST00000460962 SGSM3Q96HU1 749 aa13.04□□□□□ -0.32
GCOM1-203ENST00000460962 KDM4CQ9H3R0 1056 aa13.04□□□□□ -0.32
GCOM1-203ENST00000460962 SEMA4AQ9H3S1 761 aa13.04□□□□□ -0.32
GCOM1-203ENST00000460962 PCYOX1Q9UHG3 505 aa13.04□□□□□ -0.32
GCOM1-203ENST00000460962 USP21Q9UK80 565 aa13.04□□□□□ -0.32
GCOM1-203ENST00000460962 K7ENM7 598 aa13.04□□□□□ -0.32
GCOM1-203ENST00000460962 RBM26Q5T8P6 1007 aaKnown RBP13.04□□□□□ -0.32
GCOM1-203ENST00000460962 SLC9A9Q8IVB4 645 aa13.04□□□□□ -0.32
GCOM1-203ENST00000460962 RPUSD2Q8IZ73 545 aaKnown RBP13.04□□□□□ -0.32
GCOM1-203ENST00000460962 TAOK3Q9H2K8 898 aa13.04□□□□□ -0.32
GCOM1-203ENST00000460962 PCIF1Q9H4Z3 704 aa13.04□□□□□ -0.32
GCOM1-203ENST00000460962 KCNQ5Q9NR82 932 aa13.04□□□□□ -0.32
GCOM1-203ENST00000460962 INTS9Q9NV88 658 aaKnown RBP13.04□□□□□ -0.32
GCOM1-203ENST00000460962 WRAP73Q9P2S5 460 aaPredicted RBP13.04□□□□□ -0.32
GCOM1-203ENST00000460962 SMCHD1A6NHR9 2005 aa13.03□□□□□ -0.32
GCOM1-203ENST00000460962 HIP1RO75146 1068 aa13.03□□□□□ -0.32
GCOM1-203ENST00000460962 AGTP01019 485 aa13.03□□□□□ -0.32
GCOM1-203ENST00000460962 COMTP21964 271 aa13.03□□□□□ -0.32
GCOM1-203ENST00000460962 STAT2P52630 851 aa13.03□□□□□ -0.32
GCOM1-203ENST00000460962 GSCP56915 257 aaPredicted RBP13.03□□□□□ -0.32
GCOM1-203ENST00000460962 DLG4P78352 724 aa13.03□□□□□ -0.32
GCOM1-203ENST00000460962 IFI35P80217 286 aaPredicted RBP13.03□□□□□ -0.32
GCOM1-203ENST00000460962 TRAF1Q13077 416 aa13.03□□□□□ -0.32
GCOM1-203ENST00000460962 INTS8Q75QN2 995 aaKnown RBP13.03□□□□□ -0.32
GCOM1-203ENST00000460962 CCDC105Q8IYK2 499 aa13.03□□□□□ -0.32
GCOM1-203ENST00000460962 ZNF317Q96PQ6 595 aaPredicted RBP13.03□□□□□ -0.32
GCOM1-203ENST00000460962 ZNF577Q9BSK1 485 aa13.03□□□□□ -0.32
GCOM1-203ENST00000460962 WDR11Q9BZH6 1224 aa13.03□□□□□ -0.32
GCOM1-203ENST00000460962 CHORDC1Q9UHD1 332 aaPredicted RBP13.03□□□□□ -0.32
GCOM1-203ENST00000460962 CNOT7Q9UIV1 285 aaKnown RBP13.03□□□□□ -0.32
GCOM1-203ENST00000460962 UBR3Q6ZT12 1888 aa13.03□□□□□ -0.32
GCOM1-203ENST00000460962 GGPS1O95749 300 aa13.03□□□□□ -0.32
GCOM1-203ENST00000460962 POLR2MP0CAP2 368 aa13.03□□□□□ -0.32
GCOM1-203ENST00000460962 GHRP10912 638 aa13.03□□□□□ -0.32
GCOM1-203ENST00000460962 MUTP22033 750 aa13.03□□□□□ -0.32
GCOM1-203ENST00000460962 FGFR4P22455 802 aa13.03□□□□□ -0.32
GCOM1-203ENST00000460962 CTNNA2P26232 953 aa13.03□□□□□ -0.32
GCOM1-203ENST00000460962 CEP55Q53EZ4 464 aa13.03□□□□□ -0.32
GCOM1-203ENST00000460962 TTC27Q6P3X3 843 aa13.03□□□□□ -0.32
GCOM1-203ENST00000460962 CCDC50Q8IVM0 306 aa13.03□□□□□ -0.32
GCOM1-203ENST00000460962 ARHGEF19Q8IW93 802 aa13.03□□□□□ -0.32
GCOM1-203ENST00000460962 ATXN2LQ8WWM7 1075 aaKnown RBP13.03□□□□□ -0.32
GCOM1-203ENST00000460962 VTI1AQ96AJ9 217 aa13.03□□□□□ -0.32
GCOM1-203ENST00000460962 RPS6KC1Q96S38 1066 aa13.03□□□□□ -0.32
GCOM1-203ENST00000460962 LXNQ9BS40 222 aa13.03□□□□□ -0.32
GCOM1-203ENST00000460962 CCDC113Q9H0I3 377 aa13.03□□□□□ -0.32
GCOM1-203ENST00000460962 STMN4Q9H169 189 aaPredicted RBP13.03□□□□□ -0.32
GCOM1-203ENST00000460962 MTUS1Q9ULD2 1270 aa13.03□□□□□ -0.32
GCOM1-203ENST00000460962 TRPC6Q9Y210 931 aa13.03□□□□□ -0.32
GCOM1-203ENST00000460962 MYH11P35749 1972 aa13.02□□□□□ -0.32
GCOM1-203ENST00000460962 SLCO1A2P46721 670 aa13.02□□□□□ -0.32
GCOM1-203ENST00000460962 GCLMP48507 274 aa13.02□□□□□ -0.32
GCOM1-203ENST00000460962 SLMAPQ14BN4 828 aa13.02□□□□□ -0.32
GCOM1-203ENST00000460962 MAEAQ7L5Y9 396 aa13.02□□□□□ -0.32
GCOM1-203ENST00000460962 TAX1BP1Q86VP1 789 aa13.02□□□□□ -0.32
GCOM1-203ENST00000460962 COL23A1Q86Y22 540 aaPredicted RBP13.02□□□□□ -0.32
GCOM1-203ENST00000460962 ADAM7Q9H2U9 754 aa13.02□□□□□ -0.32
GCOM1-203ENST00000460962 UNC45AQ9H3U1 944 aa13.02□□□□□ -0.32
GCOM1-203ENST00000460962 SAMD15Q9P1V8 674 aa13.02□□□□□ -0.32
GCOM1-203ENST00000460962 PTPN22Q9Y2R2 807 aa13.02□□□□□ -0.32
GCOM1-203ENST00000460962 A0A1W2PRG0 241 aa13.02□□□□□ -0.33
GCOM1-203ENST00000460962 CCT8L1PA6NM43 557 aa13.02□□□□□ -0.33
GCOM1-203ENST00000460962 TULP1O00294 542 aaPredicted RBP13.02□□□□□ -0.33
GCOM1-203ENST00000460962 SPOPO43791 374 aa13.02□□□□□ -0.33
GCOM1-203ENST00000460962 RTN2O75298 545 aa13.02□□□□□ -0.33
GCOM1-203ENST00000460962 VAMP7P51809 220 aa13.02□□□□□ -0.33
GCOM1-203ENST00000460962 SF3A3Q12874 501 aaKnown RBP eCLIP13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms