RNA–Protein interactions for RNA: ENST00000460928.1

ATPAF1-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-203ENST00000460928 PDGFRBP09619 1106 aa5.79□□□□□ -1.48
ATPAF1-203ENST00000460928 FGFR1P11362 822 aa5.79□□□□□ -1.48
ATPAF1-203ENST00000460928 NCAM1P13591 858 aa5.79□□□□□ -1.48
ATPAF1-203ENST00000460928 NPR1P16066 1061 aa5.79□□□□□ -1.48
ATPAF1-203ENST00000460928 CCT4P50991 539 aaKnown RBP5.79□□□□□ -1.48
ATPAF1-203ENST00000460928 TGFB2P61812 414 aa5.79□□□□□ -1.48
ATPAF1-203ENST00000460928 EFEMP1Q12805 493 aa5.79□□□□□ -1.48
ATPAF1-203ENST00000460928 CRY2Q49AN0 593 aa5.79□□□□□ -1.48
ATPAF1-203ENST00000460928 NSMFQ6X4W1 530 aa5.79□□□□□ -1.48
ATPAF1-203ENST00000460928 LIPIQ6XZB0 460 aa5.79□□□□□ -1.48
ATPAF1-203ENST00000460928 NOL8Q76FK4 1167 aaKnown RBP5.79□□□□□ -1.48
ATPAF1-203ENST00000460928 ZNF227Q86WZ6 799 aa5.79□□□□□ -1.48
ATPAF1-203ENST00000460928 RPGRQ92834 1020 aaKnown RBP5.79□□□□□ -1.48
ATPAF1-203ENST00000460928 TSPAN17Q96FV3 270 aa5.79□□□□□ -1.48
ATPAF1-203ENST00000460928 BORCS6Q96GS4 357 aa5.79□□□□□ -1.48
ATPAF1-203ENST00000460928 ZDHHC15Q96MV8 337 aa5.79□□□□□ -1.48
ATPAF1-203ENST00000460928 CAAP1Q9H8G2 361 aa5.79□□□□□ -1.48
ATPAF1-203ENST00000460928 TYW1Q9NV66 732 aaKnown RBP5.79□□□□□ -1.48
ATPAF1-203ENST00000460928 CNOT11Q9UKZ1 510 aaKnown RBP5.79□□□□□ -1.48
ATPAF1-203ENST00000460928 PLA2G2DQ9UNK4 145 aa5.79□□□□□ -1.48
ATPAF1-203ENST00000460928 PA2G4Q9UQ80 394 aaKnown RBP5.79□□□□□ -1.48
ATPAF1-203ENST00000460928 ATP8A1Q9Y2Q0 1164 aa5.79□□□□□ -1.48
ATPAF1-203ENST00000460928 PMF1-BGLAPU3KQ54 211 aa5.79□□□□□ -1.48
ATPAF1-203ENST00000460928 MYH3P11055 1940 aa5.79□□□□□ -1.48
ATPAF1-203ENST00000460928 IBTKQ9P2D0 1353 aaPredicted RBP5.79□□□□□ -1.48
ATPAF1-203ENST00000460928 CDHR2Q9BYE9 1310 aa5.78□□□□□ -1.48
ATPAF1-203ENST00000460928 DLEC1Q9Y238 1755 aa5.78□□□□□ -1.48
ATPAF1-203ENST00000460928 PNMA6EA0A0J9YXQ4 647 aa5.78□□□□□ -1.48
ATPAF1-203ENST00000460928 CAPNS1P04632 268 aa5.78□□□□□ -1.48
ATPAF1-203ENST00000460928 ASGR2P07307 311 aa5.78□□□□□ -1.48
ATPAF1-203ENST00000460928 UBTFL1P0CB47 393 aaPredicted RBP5.78□□□□□ -1.48
ATPAF1-203ENST00000460928 PABPC1P11940 636 aaKnown RBP5.78□□□□□ -1.48
ATPAF1-203ENST00000460928 KLRK1P26718 216 aa5.78□□□□□ -1.48
ATPAF1-203ENST00000460928 STAT3P40763 770 aa5.78□□□□□ -1.48
ATPAF1-203ENST00000460928 GRIA2P42262 883 aa5.78□□□□□ -1.48
ATPAF1-203ENST00000460928 SF3B3Q15393 1217 aaKnown RBP5.78□□□□□ -1.48
ATPAF1-203ENST00000460928 CCDC88AQ3V6T2 1871 aa5.78□□□□□ -1.48
ATPAF1-203ENST00000460928 LRRC24Q50LG9 513 aa5.78□□□□□ -1.48
ATPAF1-203ENST00000460928 STYK1Q6J9G0 422 aa5.78□□□□□ -1.48
ATPAF1-203ENST00000460928 B3GNT8Q7Z7M8 397 aa5.78□□□□□ -1.48
ATPAF1-203ENST00000460928 FERMT3Q86UX7 667 aa5.78□□□□□ -1.48
ATPAF1-203ENST00000460928 TTLL6Q8N841 843 aa5.78□□□□□ -1.48
ATPAF1-203ENST00000460928 PRPF38AQ8NAV1 312 aaKnown RBP5.78□□□□□ -1.48
ATPAF1-203ENST00000460928 EXOC6Q8TAG9 804 aa5.78□□□□□ -1.48
ATPAF1-203ENST00000460928 ARHGAP45Q92619 1136 aa5.78□□□□□ -1.48
ATPAF1-203ENST00000460928 MASTLQ96GX5 879 aa5.78□□□□□ -1.48
ATPAF1-203ENST00000460928 MRPL4Q9BYD3 311 aaKnown RBP5.78□□□□□ -1.48
ATPAF1-203ENST00000460928 SIL1Q9H173 461 aa5.78□□□□□ -1.48
ATPAF1-203ENST00000460928 HOMER2Q9NSB8 354 aa5.78□□□□□ -1.48
ATPAF1-203ENST00000460928 AKT3Q9Y243 479 aa5.78□□□□□ -1.48
ATPAF1-203ENST00000460928 FAN1Q9Y2M0 1017 aa5.78□□□□□ -1.48
ATPAF1-203ENST00000460928 UTYO14607 1347 aa5.77□□□□□ -1.49
ATPAF1-203ENST00000460928 TAF5LO75529 589 aa5.77□□□□□ -1.49
ATPAF1-203ENST00000460928 PARNO95453 639 aaKnown RBP5.77□□□□□ -1.49
ATPAF1-203ENST00000460928 CSF1RP07333 972 aa5.77□□□□□ -1.49
ATPAF1-203ENST00000460928 TPM2P07951 284 aa5.77□□□□□ -1.49
ATPAF1-203ENST00000460928 POU3F3P20264 500 aaPredicted RBP5.77□□□□□ -1.49
ATPAF1-203ENST00000460928 TACR1P25103 407 aa5.77□□□□□ -1.49
ATPAF1-203ENST00000460928 SOX5P35711 763 aa5.77□□□□□ -1.49
ATPAF1-203ENST00000460928 RFX5P48382 616 aaPredicted RBP5.77□□□□□ -1.49
ATPAF1-203ENST00000460928 SUMO1P63165 101 aaKnown RBP5.77□□□□□ -1.49
ATPAF1-203ENST00000460928 GPSM2P81274 684 aa5.77□□□□□ -1.49
ATPAF1-203ENST00000460928 DLX2Q07687 328 aaPredicted RBP5.77□□□□□ -1.49
ATPAF1-203ENST00000460928 MVPQ14764 893 aaKnown RBP5.77□□□□□ -1.49
ATPAF1-203ENST00000460928 SPATS1Q496A3 300 aa5.77□□□□□ -1.49
ATPAF1-203ENST00000460928 CT47A1Q5JQC4 288 aaPredicted RBP5.77□□□□□ -1.49
ATPAF1-203ENST00000460928 UTP14CQ5TAP6 766 aaKnown RBP5.77□□□□□ -1.49
ATPAF1-203ENST00000460928 CNNM4Q6P4Q7 775 aa5.77□□□□□ -1.49
ATPAF1-203ENST00000460928 DDX46Q7L014 1031 aaKnown RBP5.77□□□□□ -1.49
ATPAF1-203ENST00000460928 CABP7Q86V35 215 aa5.77□□□□□ -1.49
ATPAF1-203ENST00000460928 UBR7Q8N806 425 aa5.77□□□□□ -1.49
ATPAF1-203ENST00000460928 NETO2Q8NC67 525 aa5.77□□□□□ -1.49
ATPAF1-203ENST00000460928 CPA5Q8WXQ8 436 aa5.77□□□□□ -1.49
ATPAF1-203ENST00000460928 OSBP2Q969R2 916 aa5.77□□□□□ -1.49
ATPAF1-203ENST00000460928 RBM17Q96I25 401 aaKnown RBP5.77□□□□□ -1.49
ATPAF1-203ENST00000460928 RCC1LQ96I51 464 aaKnown RBP5.77□□□□□ -1.49
ATPAF1-203ENST00000460928 MRGPRX3Q96LB0 322 aa5.77□□□□□ -1.49
ATPAF1-203ENST00000460928 MCMBPQ9BTE3 642 aa5.77□□□□□ -1.49
ATPAF1-203ENST00000460928 FAM126AQ9BYI3 521 aaPredicted RBP5.77□□□□□ -1.49
ATPAF1-203ENST00000460928 KRTAP17-1Q9BYP8 105 aa5.77□□□□□ -1.49
ATPAF1-203ENST00000460928 ZNF277Q9NRM2 450 aaPredicted RBP5.77□□□□□ -1.49
ATPAF1-203ENST00000460928 DBR1Q9UK59 544 aaKnown RBP5.77□□□□□ -1.49
ATPAF1-203ENST00000460928 EMC9Q9Y3B6 208 aa5.77□□□□□ -1.49
ATPAF1-203ENST00000460928 COL4A5P29400 1685 aa5.77□□□□□ -1.49
ATPAF1-203ENST00000460928 RNF123Q5XPI4 1314 aa5.76□□□□□ -1.49
ATPAF1-203ENST00000460928 TBX1O43435 398 aa5.76□□□□□ -1.49
ATPAF1-203ENST00000460928 S100BP04271 92 aaPredicted RBP5.76□□□□□ -1.49
ATPAF1-203ENST00000460928 SDSP20132 328 aa5.76□□□□□ -1.49
ATPAF1-203ENST00000460928 CDKN1CP49918 316 aaPredicted RBP5.76□□□□□ -1.49
ATPAF1-203ENST00000460928 RPS8P62241 208 aaKnown RBP5.76□□□□□ -1.49
ATPAF1-203ENST00000460928 GRB10Q13322 594 aa5.76□□□□□ -1.49
ATPAF1-203ENST00000460928 GRAPQ13588 217 aa5.76□□□□□ -1.49
ATPAF1-203ENST00000460928 PPP2R5DQ14738 602 aa5.76□□□□□ -1.49
ATPAF1-203ENST00000460928 SLC9A5Q14940 896 aa5.76□□□□□ -1.49
ATPAF1-203ENST00000460928 CCDC152Q4G0S7 254 aa5.76□□□□□ -1.49
ATPAF1-203ENST00000460928 TAF3Q5VWG9 929 aa5.76□□□□□ -1.49
ATPAF1-203ENST00000460928 POMZP3Q6PJE2 187 aa5.76□□□□□ -1.49
ATPAF1-203ENST00000460928 RNF180Q86T96 592 aa5.76□□□□□ -1.49
ATPAF1-203ENST00000460928 DDX42Q86XP3 938 aaKnown RBP eCLIP5.76□□□□□ -1.49
ATPAF1-203ENST00000460928 SMAP1Q8IYB5 467 aaPredicted RBP5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms