RNA–Protein interactions for RNA: ENST00000458188.2

CLTCL1-204, Transcript of clathrin heavy chain like 1, humanhuman

TSL 3

Gene CLTCL1, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-204ENST00000458188 ELOA2Q8IYF1 753 aaPredicted RBP9.55□□□□□ -0.88
CLTCL1-204ENST00000458188 DBF4BQ8NFT6 615 aa9.55□□□□□ -0.88
CLTCL1-204ENST00000458188 FAM122AQ96E09 287 aa9.55□□□□□ -0.88
CLTCL1-204ENST00000458188 ZBTB45Q96K62 511 aaPredicted RBP9.55□□□□□ -0.88
CLTCL1-204ENST00000458188 FAM161BQ96MY7 647 aa9.55□□□□□ -0.88
CLTCL1-204ENST00000458188 NTPCRQ9BSD7 190 aaKnown RBP9.55□□□□□ -0.88
CLTCL1-204ENST00000458188 TARS2Q9BW92 718 aaKnown RBP9.55□□□□□ -0.88
CLTCL1-204ENST00000458188 TMX1Q9H3N1 280 aa9.55□□□□□ -0.88
CLTCL1-204ENST00000458188 C17orf75Q9HAS0 396 aa9.55□□□□□ -0.88
CLTCL1-204ENST00000458188 ARHGAP28Q9P2N2 729 aa9.55□□□□□ -0.88
CLTCL1-204ENST00000458188 TBX20Q9UMR3 447 aa9.55□□□□□ -0.88
CLTCL1-204ENST00000458188 VCANP13611 3396 aa9.55□□□□□ -0.88
CLTCL1-204ENST00000458188 SYCE3A1L190 88 aa9.54□□□□□ -0.88
CLTCL1-204ENST00000458188 TSPAN1O60635 241 aa9.54□□□□□ -0.88
CLTCL1-204ENST00000458188 CAND2O75155 1236 aa9.54□□□□□ -0.88
CLTCL1-204ENST00000458188 ERLIN2O94905 339 aa9.54□□□□□ -0.88
CLTCL1-204ENST00000458188 RHOBTB3O94955 611 aa9.54□□□□□ -0.88
CLTCL1-204ENST00000458188 MYL1P05976 194 aa9.54□□□□□ -0.88
CLTCL1-204ENST00000458188 HARSP12081 509 aaKnown RBP9.54□□□□□ -0.88
CLTCL1-204ENST00000458188 CD44P16070 742 aaKnown RBP9.54□□□□□ -0.88
CLTCL1-204ENST00000458188 PTMSP20962 102 aa9.54□□□□□ -0.88
CLTCL1-204ENST00000458188 HOXD13P35453 343 aa9.54□□□□□ -0.88
CLTCL1-204ENST00000458188 PRCPP42785 496 aa9.54□□□□□ -0.88
CLTCL1-204ENST00000458188 GTF2BQ00403 316 aa9.54□□□□□ -0.88
CLTCL1-204ENST00000458188 CDC42EP1Q00587 391 aa9.54□□□□□ -0.88
CLTCL1-204ENST00000458188 STRN3Q13033 797 aa9.54□□□□□ -0.88
CLTCL1-204ENST00000458188 PAK2Q13177 524 aa9.54□□□□□ -0.88
CLTCL1-204ENST00000458188 PRPF4BQ13523 1007 aaKnown RBP9.54□□□□□ -0.88
CLTCL1-204ENST00000458188 MORC3Q14149 939 aa9.54□□□□□ -0.88
CLTCL1-204ENST00000458188 KCNB1Q14721 858 aa9.54□□□□□ -0.88
CLTCL1-204ENST00000458188 MAPK6Q16659 721 aa9.54□□□□□ -0.88
CLTCL1-204ENST00000458188 AMHR2Q16671 573 aa9.54□□□□□ -0.88
CLTCL1-204ENST00000458188 SKOR2Q2VWA4 1001 aaPredicted RBP9.54□□□□□ -0.88
CLTCL1-204ENST00000458188 ZNF697Q5TEC3 545 aa9.54□□□□□ -0.88
CLTCL1-204ENST00000458188 EEF1DP3Q658K8 133 aa9.54□□□□□ -0.88
CLTCL1-204ENST00000458188 TSHZ1Q6ZSZ6 1077 aa9.54□□□□□ -0.88
CLTCL1-204ENST00000458188 RTN4RL1Q86UN2 441 aaPredicted RBP9.54□□□□□ -0.88
CLTCL1-204ENST00000458188 TMEM199Q8N511 208 aa9.54□□□□□ -0.88
CLTCL1-204ENST00000458188 SPATA20Q8TB22 786 aa9.54□□□□□ -0.88
CLTCL1-204ENST00000458188 SCFD1Q8WVM8 642 aa9.54□□□□□ -0.88
CLTCL1-204ENST00000458188 CCDC47Q96A33 483 aaKnown RBP9.54□□□□□ -0.88
CLTCL1-204ENST00000458188 BICD1Q96G01 975 aa9.54□□□□□ -0.88
CLTCL1-204ENST00000458188 GUCD1Q96NT3 240 aa9.54□□□□□ -0.88
CLTCL1-204ENST00000458188 GSDMAQ96QA5 445 aa9.54□□□□□ -0.88
CLTCL1-204ENST00000458188 STRA6Q9BX79 667 aa9.54□□□□□ -0.88
CLTCL1-204ENST00000458188 IFIH1Q9BYX4 1025 aaKnown RBP9.54□□□□□ -0.88
CLTCL1-204ENST00000458188 CCDC113Q9H0I3 377 aa9.54□□□□□ -0.88
CLTCL1-204ENST00000458188 C2orf40Q9H1Z8 148 aa9.54□□□□□ -0.88
CLTCL1-204ENST00000458188 FZD8Q9H461 694 aa9.54□□□□□ -0.88
CLTCL1-204ENST00000458188 TMEM134Q9H6X4 195 aa9.54□□□□□ -0.88
CLTCL1-204ENST00000458188 ERVK-5Q9HDB9 667 aa9.54□□□□□ -0.88
CLTCL1-204ENST00000458188 SEL1LQ9UBV2 794 aa9.54□□□□□ -0.88
CLTCL1-204ENST00000458188 PIN4Q9Y237 131 aaKnown RBP9.54□□□□□ -0.88
CLTCL1-204ENST00000458188 ACKR2O00590 384 aa9.53□□□□□ -0.88
CLTCL1-204ENST00000458188 GPR182O15218 404 aa9.53□□□□□ -0.88
CLTCL1-204ENST00000458188 CLIC2O15247 247 aa9.53□□□□□ -0.88
CLTCL1-204ENST00000458188 PPP1R37O75864 691 aa9.53□□□□□ -0.88
CLTCL1-204ENST00000458188 RPLP2P05387 115 aaKnown RBP9.53□□□□□ -0.88
CLTCL1-204ENST00000458188 ARF4P18085 180 aaPredicted RBP9.53□□□□□ -0.88
CLTCL1-204ENST00000458188 SFPQP23246 707 aaKnown RBP eCLIP9.53□□□□□ -0.88
CLTCL1-204ENST00000458188 HOXA11P31270 313 aaPredicted RBP9.53□□□□□ -0.88
CLTCL1-204ENST00000458188 MATR3P43243 847 aaKnown RBP eCLIP9.53□□□□□ -0.88
CLTCL1-204ENST00000458188 EFNA5P52803 228 aa9.53□□□□□ -0.88
CLTCL1-204ENST00000458188 STX17P56962 302 aa9.53□□□□□ -0.88
CLTCL1-204ENST00000458188 FPGSQ05932 587 aa9.53□□□□□ -0.88
CLTCL1-204ENST00000458188 POU5F1BQ06416 359 aa9.53□□□□□ -0.88
CLTCL1-204ENST00000458188 PSMD2Q13200 908 aa9.53□□□□□ -0.88
CLTCL1-204ENST00000458188 SEZ6Q53EL9 994 aa9.53□□□□□ -0.88
CLTCL1-204ENST00000458188 PLEKHG4Q58EX7 1191 aa9.53□□□□□ -0.88
CLTCL1-204ENST00000458188 ZNF658Q5TYW1 1059 aaPredicted RBP9.53□□□□□ -0.88
CLTCL1-204ENST00000458188 KLHL10Q6JEL2 608 aa9.53□□□□□ -0.88
CLTCL1-204ENST00000458188 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.53□□□□□ -0.88
CLTCL1-204ENST00000458188 ZNF365Q70YC5 407 aa9.53□□□□□ -0.88
CLTCL1-204ENST00000458188 EPM2AIP1Q7L775 607 aaPredicted RBP9.53□□□□□ -0.88
CLTCL1-204ENST00000458188 OTOP2Q7RTS6 562 aa9.53□□□□□ -0.88
CLTCL1-204ENST00000458188 TMCO2Q7Z6W1 182 aaPredicted RBP9.53□□□□□ -0.88
CLTCL1-204ENST00000458188 IFNLR1Q8IU57 520 aaPredicted RBP9.53□□□□□ -0.88
CLTCL1-204ENST00000458188 SYCP3Q8IZU3 236 aa9.53□□□□□ -0.88
CLTCL1-204ENST00000458188 MAFAQ8NHW3 353 aaPredicted RBP9.53□□□□□ -0.88
CLTCL1-204ENST00000458188 ZNF507Q8TCN5 953 aa9.53□□□□□ -0.88
CLTCL1-204ENST00000458188 NOC3LQ8WTT2 800 aaKnown RBP9.53□□□□□ -0.88
CLTCL1-204ENST00000458188 SEPT8Q92599 483 aa9.53□□□□□ -0.88
CLTCL1-204ENST00000458188 ACCSQ96QU6 501 aa9.53□□□□□ -0.88
CLTCL1-204ENST00000458188 ADAM2Q99965 735 aa9.53□□□□□ -0.88
CLTCL1-204ENST00000458188 LBHD1Q9BQE6 289 aaPredicted RBP9.53□□□□□ -0.88
CLTCL1-204ENST00000458188 TCHPQ9BT92 498 aa9.53□□□□□ -0.88
CLTCL1-204ENST00000458188 EIF2AQ9BY44 585 aaKnown RBP9.53□□□□□ -0.88
CLTCL1-204ENST00000458188 PCIF1Q9H4Z3 704 aa9.53□□□□□ -0.88
CLTCL1-204ENST00000458188 OLFML3Q9NRN5 406 aa9.53□□□□□ -0.88
CLTCL1-204ENST00000458188 RNF19AQ9NV58 838 aa9.53□□□□□ -0.88
CLTCL1-204ENST00000458188 PRMT7Q9NVM4 692 aaPredicted RBP9.53□□□□□ -0.88
CLTCL1-204ENST00000458188 RMND1Q9NWS8 449 aa9.53□□□□□ -0.88
CLTCL1-204ENST00000458188 PCDHB13Q9Y5F0 798 aa9.53□□□□□ -0.88
CLTCL1-204ENST00000458188 PPP1R3GB7ZBB8 358 aa9.52□□□□□ -0.89
CLTCL1-204ENST00000458188 ENPP3O14638 875 aa9.52□□□□□ -0.89
CLTCL1-204ENST00000458188 TGFB1I1O43294 461 aa9.52□□□□□ -0.89
CLTCL1-204ENST00000458188 NPTXRO95502 500 aa9.52□□□□□ -0.89
CLTCL1-204ENST00000458188 CXCL10P02778 98 aa9.52□□□□□ -0.89
CLTCL1-204ENST00000458188 ZSCAN20P17040 1043 aaPredicted RBP9.52□□□□□ -0.89
CLTCL1-204ENST00000458188 PLA2G5P39877 138 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms