RNA–Protein interactions for RNA: ENST00000457924.2

UPF3AP2-201, Transcript of UPF3A pseudogene 2, humanhuman

BASIC

Gene UPF3AP2, Length 1,132 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP2-201ENST00000457924 KCNK17Q96T54 332 aa16.14■□□□□ 0.17
UPF3AP2-201ENST00000457924 FDXACB1Q9BRP7 624 aaPredicted RBP16.14■□□□□ 0.17
UPF3AP2-201ENST00000457924 EMILIN2Q9BXX0 1053 aa16.14■□□□□ 0.17
UPF3AP2-201ENST00000457924 NRDE2Q9H7Z3 1164 aa16.14■□□□□ 0.17
UPF3AP2-201ENST00000457924 TBC1D13Q9NVG8 400 aa16.14■□□□□ 0.17
UPF3AP2-201ENST00000457924 STK39Q9UEW8 545 aa16.14■□□□□ 0.17
UPF3AP2-201ENST00000457924 SEPT9Q9UHD8 586 aaPredicted RBP16.14■□□□□ 0.17
UPF3AP2-201ENST00000457924 INPP5FQ9Y2H2 1132 aa16.14■□□□□ 0.17
UPF3AP2-201ENST00000457924 RIF1Q5UIP0 2472 aaKnown RBP16.14■□□□□ 0.17
UPF3AP2-201ENST00000457924 PRPF3O43395 683 aaKnown RBP16.13■□□□□ 0.17
UPF3AP2-201ENST00000457924 AOC1P19801 751 aa16.13■□□□□ 0.17
UPF3AP2-201ENST00000457924 RAB27AP51159 221 aa16.13■□□□□ 0.17
UPF3AP2-201ENST00000457924 AKAP17AQ02040 695 aaKnown RBP16.13■□□□□ 0.17
UPF3AP2-201ENST00000457924 DRP2Q13474 957 aa16.13■□□□□ 0.17
UPF3AP2-201ENST00000457924 TDGQ13569 410 aa16.13■□□□□ 0.17
UPF3AP2-201ENST00000457924 PTPN14Q15678 1187 aa16.13■□□□□ 0.17
UPF3AP2-201ENST00000457924 MTERF2Q49AM1 385 aa16.13■□□□□ 0.17
UPF3AP2-201ENST00000457924 LRCH2Q5VUJ6 765 aa16.13■□□□□ 0.17
UPF3AP2-201ENST00000457924 CWF19L1Q69YN2 538 aaKnown RBP16.13■□□□□ 0.17
UPF3AP2-201ENST00000457924 ZNF410Q86VK4 478 aa16.13■□□□□ 0.17
UPF3AP2-201ENST00000457924 CCDC148Q8NFR7 591 aa16.13■□□□□ 0.17
UPF3AP2-201ENST00000457924 SLC5A5Q92911 643 aa16.13■□□□□ 0.17
UPF3AP2-201ENST00000457924 NIFKQ9BYG3 293 aaKnown RBP16.13■□□□□ 0.17
UPF3AP2-201ENST00000457924 GBP3Q9H0R5 595 aa16.13■□□□□ 0.17
UPF3AP2-201ENST00000457924 UNC45AQ9H3U1 944 aa16.13■□□□□ 0.17
UPF3AP2-201ENST00000457924 FAM105AQ9NUU6 356 aa16.13■□□□□ 0.17
UPF3AP2-201ENST00000457924 FBXL21Q9UKT6 434 aa16.13■□□□□ 0.17
UPF3AP2-201ENST00000457924 PIN4Q9Y237 131 aaKnown RBP16.13■□□□□ 0.17
UPF3AP2-201ENST00000457924 SPTBN4Q9H254 2564 aa16.12■□□□□ 0.17
UPF3AP2-201ENST00000457924 OFD1O75665 1012 aa16.12■□□□□ 0.17
UPF3AP2-201ENST00000457924 KLRC2P26717 231 aa16.12■□□□□ 0.17
UPF3AP2-201ENST00000457924 USP11P51784 963 aa16.12■□□□□ 0.17
UPF3AP2-201ENST00000457924 XKR3Q5GH77 459 aa16.12■□□□□ 0.17
UPF3AP2-201ENST00000457924 MIER3Q7Z3K6 550 aa16.12■□□□□ 0.17
UPF3AP2-201ENST00000457924 RHPN2Q8IUC4 686 aa16.12■□□□□ 0.17
UPF3AP2-201ENST00000457924 ADSSL1Q8N142 457 aa16.12■□□□□ 0.17
UPF3AP2-201ENST00000457924 RDM1Q8NG50 284 aa16.12■□□□□ 0.17
UPF3AP2-201ENST00000457924 URGCPQ8TCY9 931 aa16.12■□□□□ 0.17
UPF3AP2-201ENST00000457924 BCL7CQ8WUZ0 217 aaPredicted RBP16.12■□□□□ 0.17
UPF3AP2-201ENST00000457924 PGBD4Q96DM1 585 aa16.12■□□□□ 0.17
UPF3AP2-201ENST00000457924 KLHL5Q96PQ7 755 aa16.12■□□□□ 0.17
UPF3AP2-201ENST00000457924 RTP3Q9BQQ7 232 aa16.12■□□□□ 0.17
UPF3AP2-201ENST00000457924 SUCLA2Q9P2R7 463 aaPredicted RBP16.12■□□□□ 0.17
UPF3AP2-201ENST00000457924 DNAJB4Q9UDY4 337 aa16.12■□□□□ 0.17
UPF3AP2-201ENST00000457924 DUSP12Q9UNI6 340 aa16.12■□□□□ 0.17
UPF3AP2-201ENST00000457924 C2orf16Q68DN1 1984 aa16.12■□□□□ 0.17
UPF3AP2-201ENST00000457924 ZNF623O75123 536 aa16.11■□□□□ 0.17
UPF3AP2-201ENST00000457924 SSBP05455 408 aaKnown RBP eCLIP16.11■□□□□ 0.17
UPF3AP2-201ENST00000457924 NPR3P17342 541 aa16.11■□□□□ 0.17
UPF3AP2-201ENST00000457924 SLC11A1P49279 550 aa16.11■□□□□ 0.17
UPF3AP2-201ENST00000457924 CLCN4P51793 760 aa16.11■□□□□ 0.17
UPF3AP2-201ENST00000457924 CATSPER4Q7RTX7 472 aa16.11■□□□□ 0.17
UPF3AP2-201ENST00000457924 ERMP1Q7Z2K6 904 aa16.11■□□□□ 0.17
UPF3AP2-201ENST00000457924 CCDC105Q8IYK2 499 aa16.11■□□□□ 0.17
UPF3AP2-201ENST00000457924 KCNK12Q9HB15 430 aa16.11■□□□□ 0.17
UPF3AP2-201ENST00000457924 IGKV6-21A0A0C4DH24 114 aa16.1■□□□□ 0.17
UPF3AP2-201ENST00000457924 MEIS3P2A8K0S8 358 aa16.1■□□□□ 0.17
UPF3AP2-201ENST00000457924 PI15O43692 258 aa16.1■□□□□ 0.17
UPF3AP2-201ENST00000457924 ALDH2P05091 517 aa16.1■□□□□ 0.17
UPF3AP2-201ENST00000457924 ID4P47928 161 aa16.1■□□□□ 0.17
UPF3AP2-201ENST00000457924 ANGPT1Q15389 498 aa16.1■□□□□ 0.17
UPF3AP2-201ENST00000457924 LETM2Q2VYF4 491 aa16.1■□□□□ 0.17
UPF3AP2-201ENST00000457924 C15orf39Q6ZRI6 1047 aa16.1■□□□□ 0.17
UPF3AP2-201ENST00000457924 Q6ZUG5 572 aa16.1■□□□□ 0.17
UPF3AP2-201ENST00000457924 SIX5Q8N196 739 aa16.1■□□□□ 0.17
UPF3AP2-201ENST00000457924 FEZF2Q8TBJ5 459 aa16.1■□□□□ 0.17
UPF3AP2-201ENST00000457924 PHKBQ93100 1093 aa16.1■□□□□ 0.17
UPF3AP2-201ENST00000457924 GJA10Q969M2 543 aa16.1■□□□□ 0.17
UPF3AP2-201ENST00000457924 NLRP4Q96MN2 994 aa16.1■□□□□ 0.17
UPF3AP2-201ENST00000457924 FAM193BQ96PV7 902 aaPredicted RBP16.1■□□□□ 0.17
UPF3AP2-201ENST00000457924 JPH2Q9BR39 696 aaPredicted RBP16.1■□□□□ 0.17
UPF3AP2-201ENST00000457924 SH2D3AQ9BRG2 576 aa16.1■□□□□ 0.17
UPF3AP2-201ENST00000457924 VN1R3Q9BXE9 311 aa16.1■□□□□ 0.17
UPF3AP2-201ENST00000457924 MRPL17Q9NRX2 175 aaKnown RBP16.1■□□□□ 0.17
UPF3AP2-201ENST00000457924 IGSF9Q9P2J2 1179 aa16.1■□□□□ 0.17
UPF3AP2-201ENST00000457924 TMEM150BA6NC51 233 aa16.09■□□□□ 0.17
UPF3AP2-201ENST00000457924 DDX11L8A8MPP1 907 aa16.09■□□□□ 0.17
UPF3AP2-201ENST00000457924 EDIL3O43854 480 aa16.09■□□□□ 0.17
UPF3AP2-201ENST00000457924 MAFO75444 373 aaPredicted RBP16.09■□□□□ 0.17
UPF3AP2-201ENST00000457924 PSMD10O75832 226 aa16.09■□□□□ 0.17
UPF3AP2-201ENST00000457924 CNPP09543 421 aaKnown RBP16.09■□□□□ 0.17
UPF3AP2-201ENST00000457924 IRX6P78412 446 aaPredicted RBP16.09■□□□□ 0.17
UPF3AP2-201ENST00000457924 Q4G0T1 1027 aa16.09■□□□□ 0.17
UPF3AP2-201ENST00000457924 DMRTA1Q5VZB9 504 aa16.09■□□□□ 0.17
UPF3AP2-201ENST00000457924 ZNF280BQ86YH2 543 aa16.09■□□□□ 0.17
UPF3AP2-201ENST00000457924 DTWD2Q8NBA8 298 aa16.09■□□□□ 0.17
UPF3AP2-201ENST00000457924 BRF1Q92994 677 aa16.09■□□□□ 0.17
UPF3AP2-201ENST00000457924 CEP89Q96ST8 783 aa16.09■□□□□ 0.17
UPF3AP2-201ENST00000457924 TMEM175Q9BSA9 504 aa16.09■□□□□ 0.17
UPF3AP2-201ENST00000457924 RNF26Q9BY78 433 aaPredicted RBP16.09■□□□□ 0.17
UPF3AP2-201ENST00000457924 VPS54Q9P1Q0 977 aa16.09■□□□□ 0.17
UPF3AP2-201ENST00000457924 KANSL3Q9P2N6 904 aa16.09■□□□□ 0.17
UPF3AP2-201ENST00000457924 FAN1Q9Y2M0 1017 aa16.09■□□□□ 0.17
UPF3AP2-201ENST00000457924 PCDHB2Q9Y5E7 798 aa16.09■□□□□ 0.17
UPF3AP2-201ENST00000457924 STBD1O95210 358 aa16.08■□□□□ 0.16
UPF3AP2-201ENST00000457924 NONOQ15233 471 aaKnown RBP eCLIP16.08■□□□□ 0.16
UPF3AP2-201ENST00000457924 BMP2KLQ5H9B9 411 aa16.08■□□□□ 0.16
UPF3AP2-201ENST00000457924 ELMSAN1Q6PJG2 1045 aa16.08■□□□□ 0.16
UPF3AP2-201ENST00000457924 KSR1Q8IVT5 923 aa16.08■□□□□ 0.16
UPF3AP2-201ENST00000457924 TBCKQ8TEA7 893 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms