RNA–Protein interactions for RNA: ENST00000456847.7

CPSF6-203, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 5 BASIC

Gene CPSF6, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-203ENST00000456847 GBP3Q9H0R5 595 aa17.96■□□□□ 0.47
CPSF6-203ENST00000456847 ENTPD7Q9NQZ7 604 aa17.96■□□□□ 0.47
CPSF6-203ENST00000456847 PCDHGC5Q9Y5F6 944 aa17.96■□□□□ 0.47
CPSF6-203ENST00000456847 CNTNAP2Q9UHC6 1331 aa17.96■□□□□ 0.47
CPSF6-203ENST00000456847 VWA3AA6NCI4 1184 aa17.96■□□□□ 0.47
CPSF6-203ENST00000456847 ITGA4P13612 1032 aa17.96■□□□□ 0.47
CPSF6-203ENST00000456847 CDC25AP30304 524 aa17.96■□□□□ 0.47
CPSF6-203ENST00000456847 GTF2F1P35269 517 aaKnown RBP eCLIP17.96■□□□□ 0.47
CPSF6-203ENST00000456847 ALDH7A1P49419 539 aaKnown RBP17.96■□□□□ 0.47
CPSF6-203ENST00000456847 BCAR1P56945 870 aa17.96■□□□□ 0.47
CPSF6-203ENST00000456847 PPP2R5AQ15172 486 aa17.96■□□□□ 0.47
CPSF6-203ENST00000456847 PLPP4Q5VZY2 271 aa17.96■□□□□ 0.47
CPSF6-203ENST00000456847 BRAPQ7Z569 592 aa17.96■□□□□ 0.47
CPSF6-203ENST00000456847 DEPTORQ8TB45 409 aa17.96■□□□□ 0.47
CPSF6-203ENST00000456847 EIF2AQ9BY44 585 aaKnown RBP17.96■□□□□ 0.47
CPSF6-203ENST00000456847 CSRNP2Q9H175 543 aa17.96■□□□□ 0.47
CPSF6-203ENST00000456847 C2orf40Q9H1Z8 148 aa17.96■□□□□ 0.47
CPSF6-203ENST00000456847 TBC1D13Q9NVG8 400 aa17.96■□□□□ 0.47
CPSF6-203ENST00000456847 DNM3Q9UQ16 869 aa17.96■□□□□ 0.47
CPSF6-203ENST00000456847 LZTS1Q9Y250 596 aa17.96■□□□□ 0.47
CPSF6-203ENST00000456847 E9PMD0 336 aa17.95■□□□□ 0.46
CPSF6-203ENST00000456847 TNFRSF10AO00220 468 aa17.95■□□□□ 0.46
CPSF6-203ENST00000456847 OFD1O75665 1012 aa17.95■□□□□ 0.46
CPSF6-203ENST00000456847 ARF4P18085 180 aaPredicted RBP17.95■□□□□ 0.46
CPSF6-203ENST00000456847 LIG1P18858 919 aa17.95■□□□□ 0.46
CPSF6-203ENST00000456847 NCLP19338 710 aaKnown RBP17.95■□□□□ 0.46
CPSF6-203ENST00000456847 NRIP1P48552 1158 aa17.95■□□□□ 0.46
CPSF6-203ENST00000456847 PLCB3Q01970 1234 aa17.95■□□□□ 0.46
CPSF6-203ENST00000456847 AMHR2Q16671 573 aa17.95■□□□□ 0.46
CPSF6-203ENST00000456847 AGMOQ6ZNB7 445 aa17.95■□□□□ 0.46
CPSF6-203ENST00000456847 MRPL10Q7Z7H8 261 aaKnown RBP17.95■□□□□ 0.46
CPSF6-203ENST00000456847 RBM23Q86U06 439 aaKnown RBP17.95■□□□□ 0.46
CPSF6-203ENST00000456847 HACE1Q8IYU2 909 aa17.95■□□□□ 0.46
CPSF6-203ENST00000456847 CDK5RAP3Q96JB5 506 aa17.95■□□□□ 0.46
CPSF6-203ENST00000456847 IFT74Q96LB3 600 aa17.95■□□□□ 0.46
CPSF6-203ENST00000456847 APOL6Q9BWW8 343 aa17.95■□□□□ 0.46
CPSF6-203ENST00000456847 FOXD4L1Q9NU39 408 aa17.95■□□□□ 0.46
CPSF6-203ENST00000456847 PRMT7Q9NVM4 692 aaPredicted RBP17.95■□□□□ 0.46
CPSF6-203ENST00000456847 IPPQ9Y573 584 aa17.95■□□□□ 0.46
CPSF6-203ENST00000456847 NT5C1B-RDH14C9J2C7 533 aa17.94■□□□□ 0.46
CPSF6-203ENST00000456847 B4GALT5O43286 388 aa17.94■□□□□ 0.46
CPSF6-203ENST00000456847 EYA4O95677 639 aa17.94■□□□□ 0.46
CPSF6-203ENST00000456847 CA8P35219 290 aa17.94■□□□□ 0.46
CPSF6-203ENST00000456847 NAMPTP43490 491 aa17.94■□□□□ 0.46
CPSF6-203ENST00000456847 NDUFV1P49821 464 aa17.94■□□□□ 0.46
CPSF6-203ENST00000456847 PTCRAQ6ISU1 281 aaPredicted RBP17.94■□□□□ 0.46
CPSF6-203ENST00000456847 PDE12Q6L8Q7 609 aaKnown RBP17.94■□□□□ 0.46
CPSF6-203ENST00000456847 SLC39A11Q8N1S5 342 aa17.94■□□□□ 0.46
CPSF6-203ENST00000456847 BSNDQ8WZ55 320 aa17.94■□□□□ 0.46
CPSF6-203ENST00000456847 TMEM169Q96HH4 297 aa17.94■□□□□ 0.46
CPSF6-203ENST00000456847 FAM193BQ96PV7 902 aaPredicted RBP17.94■□□□□ 0.46
CPSF6-203ENST00000456847 TCF25Q9BQ70 676 aa17.94■□□□□ 0.46
CPSF6-203ENST00000456847 TLE6Q9H808 572 aa17.94■□□□□ 0.46
CPSF6-203ENST00000456847 TDRD15B5MCY1 1934 aaKnown RBP17.94■□□□□ 0.46
CPSF6-203ENST00000456847 K7ELQ4 463 aaPredicted RBP17.94■□□□□ 0.46
CPSF6-203ENST00000456847 LINC01565O15544 149 aa17.94■□□□□ 0.46
CPSF6-203ENST00000456847 NPTXRO95502 500 aa17.94■□□□□ 0.46
CPSF6-203ENST00000456847 ERVFC1P60507 584 aa17.94■□□□□ 0.46
CPSF6-203ENST00000456847 COL19A1Q14993 1142 aa17.94■□□□□ 0.46
CPSF6-203ENST00000456847 ARL6IP4Q66PJ3 421 aaKnown RBP17.94■□□□□ 0.46
CPSF6-203ENST00000456847 CDCA2Q69YH5 1023 aaPredicted RBP17.94■□□□□ 0.46
CPSF6-203ENST00000456847 CDR2LQ86X02 465 aaPredicted RBP17.94■□□□□ 0.46
CPSF6-203ENST00000456847 SMG8Q8ND04 991 aaKnown RBP17.94■□□□□ 0.46
CPSF6-203ENST00000456847 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.94■□□□□ 0.46
CPSF6-203ENST00000456847 KIFAP3Q92845 792 aa17.94■□□□□ 0.46
CPSF6-203ENST00000456847 NRDE2Q9H7Z3 1164 aa17.94■□□□□ 0.46
CPSF6-203ENST00000456847 UBN1Q9NPG3 1134 aa17.94■□□□□ 0.46
CPSF6-203ENST00000456847 CARNS1A5YM72 827 aa17.93■□□□□ 0.46
CPSF6-203ENST00000456847 BMP15O95972 392 aa17.93■□□□□ 0.46
CPSF6-203ENST00000456847 CLUL1Q15846 466 aa17.93■□□□□ 0.46
CPSF6-203ENST00000456847 PUS10Q3MIT2 529 aaKnown RBP17.93■□□□□ 0.46
CPSF6-203ENST00000456847 SLC27A1Q6PCB7 646 aa17.93■□□□□ 0.46
CPSF6-203ENST00000456847 PRIMPOLQ96LW4 560 aa17.93■□□□□ 0.46
CPSF6-203ENST00000456847 MMTAG2Q9BU76 263 aaKnown RBP17.93■□□□□ 0.46
CPSF6-203ENST00000456847 POLD4Q9HCU8 107 aa17.93■□□□□ 0.46
CPSF6-203ENST00000456847 FAM50BQ9Y247 325 aa17.93■□□□□ 0.46
CPSF6-203ENST00000456847 HES2Q9Y543 173 aa17.93■□□□□ 0.46
CPSF6-203ENST00000456847 MYH11P35749 1972 aa17.92■□□□□ 0.46
CPSF6-203ENST00000456847 FSCN2O14926 492 aa17.92■□□□□ 0.46
CPSF6-203ENST00000456847 SSBP05455 408 aaKnown RBP eCLIP17.92■□□□□ 0.46
CPSF6-203ENST00000456847 PRKCBP05771 671 aa17.92■□□□□ 0.46
CPSF6-203ENST00000456847 MAPK6Q16659 721 aa17.92■□□□□ 0.46
CPSF6-203ENST00000456847 PPP4R3CPQ6ZMV5 832 aa17.92■□□□□ 0.46
CPSF6-203ENST00000456847 TMC7Q7Z402 723 aa17.92■□□□□ 0.46
CPSF6-203ENST00000456847 PLIN2Q99541 437 aa17.92■□□□□ 0.46
CPSF6-203ENST00000456847 NT5C3AQ9H0P0 336 aa17.92■□□□□ 0.46
CPSF6-203ENST00000456847 KANSL3Q9P2N6 904 aa17.92■□□□□ 0.46
CPSF6-203ENST00000456847 TBX10O75333 385 aa17.92■□□□□ 0.46
CPSF6-203ENST00000456847 POMCP01189 267 aa17.92■□□□□ 0.46
CPSF6-203ENST00000456847 IL9P15248 144 aa17.92■□□□□ 0.46
CPSF6-203ENST00000456847 MLH1P40692 756 aa17.92■□□□□ 0.46
CPSF6-203ENST00000456847 PRPF4BQ13523 1007 aaKnown RBP17.92■□□□□ 0.46
CPSF6-203ENST00000456847 CTC1Q2NKJ3 1217 aa17.92■□□□□ 0.46
CPSF6-203ENST00000456847 EFHBQ8N7U6 833 aa17.92■□□□□ 0.46
CPSF6-203ENST00000456847 INTS4Q96HW7 963 aaKnown RBP17.92■□□□□ 0.46
CPSF6-203ENST00000456847 KIFC3Q9BVG8 833 aa17.92■□□□□ 0.46
CPSF6-203ENST00000456847 NXF3Q9H4D5 531 aaKnown RBP17.92■□□□□ 0.46
CPSF6-203ENST00000456847 DNAJB4Q9UDY4 337 aa17.92■□□□□ 0.46
CPSF6-203ENST00000456847 N4BP3O15049 544 aa17.91■□□□□ 0.46
CPSF6-203ENST00000456847 PER2O15055 1255 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms