RNA–Protein interactions for RNA: ENST00000456542.5

SP140-207, Transcript of SP140 nuclear body protein, humanhuman

TSL 4

Gene SP140, Length 580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-207ENST00000456542 ARF4P18085 180 aaPredicted RBP9.38□□□□□ -0.91
SP140-207ENST00000456542 SCP2P22307 547 aa9.38□□□□□ -0.91
SP140-207ENST00000456542 NPTX2P47972 431 aa9.38□□□□□ -0.91
SP140-207ENST00000456542 SMTNP53814 917 aa9.38□□□□□ -0.91
SP140-207ENST00000456542 PEX3P56589 373 aa9.38□□□□□ -0.91
SP140-207ENST00000456542 MCM6Q14566 821 aa9.38□□□□□ -0.91
SP140-207ENST00000456542 FOXD4L6Q3SYB3 417 aaPredicted RBP9.38□□□□□ -0.91
SP140-207ENST00000456542 NAALADL2Q58DX5 795 aa9.38□□□□□ -0.91
SP140-207ENST00000456542 ARSHQ5FYA8 562 aa9.38□□□□□ -0.91
SP140-207ENST00000456542 UBXN11Q5T124 520 aa9.38□□□□□ -0.91
SP140-207ENST00000456542 SHC4Q6S5L8 630 aa9.38□□□□□ -0.91
SP140-207ENST00000456542 FOXD4L3Q6VB84 417 aaPredicted RBP9.38□□□□□ -0.91
SP140-207ENST00000456542 MRPL10Q7Z7H8 261 aaKnown RBP9.38□□□□□ -0.91
SP140-207ENST00000456542 MYLIPQ8WY64 445 aa9.38□□□□□ -0.91
SP140-207ENST00000456542 PGBD4Q96DM1 585 aa9.38□□□□□ -0.91
SP140-207ENST00000456542 GAS2L1Q99501 681 aaPredicted RBP9.38□□□□□ -0.91
SP140-207ENST00000456542 REEP2Q9BRK0 252 aa9.38□□□□□ -0.91
SP140-207ENST00000456542 CUEDC2Q9H467 287 aa9.38□□□□□ -0.91
SP140-207ENST00000456542 PRDM12Q9H4Q4 367 aa9.38□□□□□ -0.91
SP140-207ENST00000456542 RNF19AQ9NV58 838 aa9.38□□□□□ -0.91
SP140-207ENST00000456542 LARSQ9P2J5 1176 aaKnown RBP9.38□□□□□ -0.91
SP140-207ENST00000456542 ARHGAP28Q9P2N2 729 aa9.38□□□□□ -0.91
SP140-207ENST00000456542 PCDHA7Q9UN72 937 aa9.38□□□□□ -0.91
SP140-207ENST00000456542 TDRD15B5MCY1 1934 aaKnown RBP9.38□□□□□ -0.91
SP140-207ENST00000456542 PRRC2BQ5JSZ5 2229 aaKnown RBP9.37□□□□□ -0.91
SP140-207ENST00000456542 A0A087X0B3 334 aa9.37□□□□□ -0.91
SP140-207ENST00000456542 CCDC169A6NNP5 214 aa9.37□□□□□ -0.91
SP140-207ENST00000456542 TBKBP1A7MCY6 615 aa9.37□□□□□ -0.91
SP140-207ENST00000456542 C5orf67F2Z3F1 127 aa9.37□□□□□ -0.91
SP140-207ENST00000456542 H0YCG3 227 aa9.37□□□□□ -0.91
SP140-207ENST00000456542 K7ERI5 159 aa9.37□□□□□ -0.91
SP140-207ENST00000456542 B4GALT5O43286 388 aa9.37□□□□□ -0.91
SP140-207ENST00000456542 KRT18P05783 430 aaKnown RBP9.37□□□□□ -0.91
SP140-207ENST00000456542 RB1P06400 928 aa9.37□□□□□ -0.91
SP140-207ENST00000456542 FGFR1P11362 822 aa9.37□□□□□ -0.91
SP140-207ENST00000456542 NCLP19338 710 aaKnown RBP9.37□□□□□ -0.91
SP140-207ENST00000456542 POU3F3P20264 500 aaPredicted RBP9.37□□□□□ -0.91
SP140-207ENST00000456542 BMPR1AP36894 532 aa9.37□□□□□ -0.91
SP140-207ENST00000456542 STAT6P42226 847 aa9.37□□□□□ -0.91
SP140-207ENST00000456542 ME1P48163 572 aa9.37□□□□□ -0.91
SP140-207ENST00000456542 GATMP50440 423 aa9.37□□□□□ -0.91
SP140-207ENST00000456542 ZNF131P52739 623 aa9.37□□□□□ -0.91
SP140-207ENST00000456542 RAD51AP2Q09MP3 1159 aa9.37□□□□□ -0.91
SP140-207ENST00000456542 PRPF4BQ13523 1007 aaKnown RBP9.37□□□□□ -0.91
SP140-207ENST00000456542 GIT2Q14161 759 aa9.37□□□□□ -0.91
SP140-207ENST00000456542 E2F4Q16254 413 aa9.37□□□□□ -0.91
SP140-207ENST00000456542 EPC2Q52LR7 807 aa9.37□□□□□ -0.91
SP140-207ENST00000456542 CLLU1OSQ5K130 101 aa9.37□□□□□ -0.91
SP140-207ENST00000456542 SLC27A1Q6PCB7 646 aa9.37□□□□□ -0.91
SP140-207ENST00000456542 SV2BQ7L1I2 683 aa9.37□□□□□ -0.91
SP140-207ENST00000456542 SPRED2Q7Z698 418 aa9.37□□□□□ -0.91
SP140-207ENST00000456542 TMEM192Q8IY95 271 aa9.37□□□□□ -0.91
SP140-207ENST00000456542 ABI1Q8IZP0 508 aa9.37□□□□□ -0.91
SP140-207ENST00000456542 LRRC43Q8N309 656 aa9.37□□□□□ -0.91
SP140-207ENST00000456542 FBXO22Q8NEZ5 403 aa9.37□□□□□ -0.91
SP140-207ENST00000456542 LEO1Q8WVC0 666 aaPredicted RBP9.37□□□□□ -0.91
SP140-207ENST00000456542 ARNTL2Q8WYA1 636 aa9.37□□□□□ -0.91
SP140-207ENST00000456542 CPB2Q96IY4 423 aa9.37□□□□□ -0.91
SP140-207ENST00000456542 SPATA32Q96LK8 384 aa9.37□□□□□ -0.91
SP140-207ENST00000456542 CASD1Q96PB1 797 aa9.37□□□□□ -0.91
SP140-207ENST00000456542 C17orf80Q9BSJ5 609 aa9.37□□□□□ -0.91
SP140-207ENST00000456542 KIFC3Q9BVG8 833 aa9.37□□□□□ -0.91
SP140-207ENST00000456542 PLVAPQ9BX97 442 aa9.37□□□□□ -0.91
SP140-207ENST00000456542 MRPL9Q9BYD2 267 aaKnown RBP9.37□□□□□ -0.91
SP140-207ENST00000456542 SCAND2PQ9GZW5 306 aaPredicted RBP9.37□□□□□ -0.91
SP140-207ENST00000456542 TMEM134Q9H6X4 195 aa9.37□□□□□ -0.91
SP140-207ENST00000456542 CERS4Q9HA82 394 aa9.37□□□□□ -0.91
SP140-207ENST00000456542 PARVGQ9HBI0 331 aa9.37□□□□□ -0.91
SP140-207ENST00000456542 POLD4Q9HCU8 107 aa9.37□□□□□ -0.91
SP140-207ENST00000456542 KMT5AQ9NQR1 393 aa9.37□□□□□ -0.91
SP140-207ENST00000456542 PCDHB2Q9Y5E7 798 aa9.37□□□□□ -0.91
SP140-207ENST00000456542 MRPL42Q9Y6G3 142 aaKnown RBP9.37□□□□□ -0.91
SP140-207ENST00000456542 ZMYM2Q9UBW7 1377 aa9.37□□□□□ -0.91
SP140-207ENST00000456542 LAMA2P24043 3122 aaKnown RBP9.36□□□□□ -0.91
SP140-207ENST00000456542 CITO14578 2027 aa9.36□□□□□ -0.91
SP140-207ENST00000456542 TRIP11Q15643 1979 aa9.36□□□□□ -0.91
SP140-207ENST00000456542 CARNS1A5YM72 827 aa9.36□□□□□ -0.91
SP140-207ENST00000456542 EPOPA6NHQ4 379 aa9.36□□□□□ -0.91
SP140-207ENST00000456542 SFI1A8K8P3 1242 aa9.36□□□□□ -0.91
SP140-207ENST00000456542 H3BNC9 293 aa9.36□□□□□ -0.91
SP140-207ENST00000456542 N4BP3O15049 544 aa9.36□□□□□ -0.91
SP140-207ENST00000456542 SLC16A4O15374 487 aa9.36□□□□□ -0.91
SP140-207ENST00000456542 TBCAO75347 108 aaKnown RBP9.36□□□□□ -0.91
SP140-207ENST00000456542 FAM13AO94988 1023 aa9.36□□□□□ -0.91
SP140-207ENST00000456542 FOSL2P15408 326 aa9.36□□□□□ -0.91
SP140-207ENST00000456542 IBSPP21815 317 aaPredicted RBP9.36□□□□□ -0.91
SP140-207ENST00000456542 ABCD1P33897 745 aa9.36□□□□□ -0.91
SP140-207ENST00000456542 ANP32AP39687 249 aaKnown RBP9.36□□□□□ -0.91
SP140-207ENST00000456542 NCKAP1LP55160 1127 aa9.36□□□□□ -0.91
SP140-207ENST00000456542 ADGRE1Q14246 886 aa9.36□□□□□ -0.91
SP140-207ENST00000456542 DHX8Q14562 1220 aaKnown RBP9.36□□□□□ -0.91
SP140-207ENST00000456542 PAN2Q504Q3 1202 aaKnown RBP9.36□□□□□ -0.91
SP140-207ENST00000456542 RESP18Q5W5W9 173 aa9.36□□□□□ -0.91
SP140-207ENST00000456542 ADALQ6DHV7 355 aa9.36□□□□□ -0.91
SP140-207ENST00000456542 GLB1LQ6UWU2 654 aa9.36□□□□□ -0.91
SP140-207ENST00000456542 HACE1Q8IYU2 909 aa9.36□□□□□ -0.91
SP140-207ENST00000456542 PDILTQ8N807 584 aa9.36□□□□□ -0.91
SP140-207ENST00000456542 IQUBQ8NA54 791 aa9.36□□□□□ -0.91
SP140-207ENST00000456542 RNF169Q8NCN4 708 aa9.36□□□□□ -0.91
SP140-207ENST00000456542 SMG8Q8ND04 991 aaKnown RBP9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms