RNA–Protein interactions for RNA: ENST00000455554.2

LINC02540-201, Transcript of long intergenic non-protein coding RNA 2540, humanhuman

TSL 3 BASIC

Gene LINC02540, Length 570 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02540-201ENST00000455554 OSBPL6Q9BZF3 934 aa3.47□□□□□ -1.85
LINC02540-201ENST00000455554 ENKD1Q9H0I2 346 aa3.47□□□□□ -1.85
LINC02540-201ENST00000455554 ACSS2Q9NR19 701 aa3.47□□□□□ -1.85
LINC02540-201ENST00000455554 MYADML2A6NDP7 307 aa3.46□□□□□ -1.86
LINC02540-201ENST00000455554 MAFGO15525 162 aa3.46□□□□□ -1.86
LINC02540-201ENST00000455554 FSBPO95073 299 aa3.46□□□□□ -1.86
LINC02540-201ENST00000455554 KCNA6P17658 529 aa3.46□□□□□ -1.86
LINC02540-201ENST00000455554 BMPR1AP36894 532 aa3.46□□□□□ -1.86
LINC02540-201ENST00000455554 PLA2G5P39877 138 aa3.46□□□□□ -1.86
LINC02540-201ENST00000455554 BLOC1S1P78537 153 aa3.46□□□□□ -1.86
LINC02540-201ENST00000455554 GUCY1B3Q02153 619 aa3.46□□□□□ -1.86
LINC02540-201ENST00000455554 FOXI1Q12951 378 aa3.46□□□□□ -1.86
LINC02540-201ENST00000455554 MYBPC3Q14896 1274 aa3.46□□□□□ -1.86
LINC02540-201ENST00000455554 BEAN1Q3B7T3 259 aa3.46□□□□□ -1.86
LINC02540-201ENST00000455554 TRIM61Q5EBN2 209 aa3.46□□□□□ -1.86
LINC02540-201ENST00000455554 BRAPQ7Z569 592 aa3.46□□□□□ -1.86
LINC02540-201ENST00000455554 NME9Q86XW9 330 aa3.46□□□□□ -1.86
LINC02540-201ENST00000455554 PLXDC1Q8IUK5 500 aa3.46□□□□□ -1.86
LINC02540-201ENST00000455554 SLC43A3Q8NBI5 491 aa3.46□□□□□ -1.86
LINC02540-201ENST00000455554 SCLYQ96I15 445 aa3.46□□□□□ -1.86
LINC02540-201ENST00000455554 PITHD1Q9GZP4 211 aaPredicted RBP3.46□□□□□ -1.86
LINC02540-201ENST00000455554 ALG13Q9NP73 1137 aaKnown RBP3.46□□□□□ -1.86
LINC02540-201ENST00000455554 ING3Q9NXR8 418 aa3.46□□□□□ -1.86
LINC02540-201ENST00000455554 DKK2Q9UBU2 259 aa3.46□□□□□ -1.86
LINC02540-201ENST00000455554 HDAC5Q9UQL6 1122 aa3.46□□□□□ -1.86
LINC02540-201ENST00000455554 CCDC9Q9Y3X0 531 aaKnown RBP3.46□□□□□ -1.86
LINC02540-201ENST00000455554 CHST2Q9Y4C5 530 aa3.46□□□□□ -1.86
LINC02540-201ENST00000455554 A0A0A6YYJ9 748 aa3.45□□□□□ -1.86
LINC02540-201ENST00000455554 TCRBV16S1A1N1A0A5B0 115 aa3.45□□□□□ -1.86
LINC02540-201ENST00000455554 PIPSLA2A3N6 862 aa3.45□□□□□ -1.86
LINC02540-201ENST00000455554 DVL2O14641 736 aa3.45□□□□□ -1.86
LINC02540-201ENST00000455554 CYP17A1P05093 508 aa3.45□□□□□ -1.86
LINC02540-201ENST00000455554 GAAP10253 952 aa3.45□□□□□ -1.86
LINC02540-201ENST00000455554 TCF3P15923 654 aa3.45□□□□□ -1.86
LINC02540-201ENST00000455554 WNT3AP56704 352 aa3.45□□□□□ -1.86
LINC02540-201ENST00000455554 ZC3H12BQ5HYM0 836 aaKnown RBP3.45□□□□□ -1.86
LINC02540-201ENST00000455554 DOK3Q7L591 496 aa3.45□□□□□ -1.86
LINC02540-201ENST00000455554 CPEB3Q8NE35 698 aaKnown RBP3.45□□□□□ -1.86
LINC02540-201ENST00000455554 OR5M3Q8NGP4 307 aa3.45□□□□□ -1.86
LINC02540-201ENST00000455554 IL17RAQ96F46 866 aa3.45□□□□□ -1.86
LINC02540-201ENST00000455554 LSM14BQ9BX40 385 aaKnown RBP3.45□□□□□ -1.86
LINC02540-201ENST00000455554 CCDC113Q9H0I3 377 aa3.45□□□□□ -1.86
LINC02540-201ENST00000455554 MTG2Q9H4K7 406 aa3.45□□□□□ -1.86
LINC02540-201ENST00000455554 PCIF1Q9H4Z3 704 aa3.45□□□□□ -1.86
LINC02540-201ENST00000455554 TNPO3Q9Y5L0 923 aaKnown RBP3.45□□□□□ -1.86
LINC02540-201ENST00000455554 COL3A1P02461 1466 aaPredicted RBP3.44□□□□□ -1.86
LINC02540-201ENST00000455554 UNC119BA6NIH7 251 aa3.44□□□□□ -1.86
LINC02540-201ENST00000455554 CCDC85CA6NKD9 419 aa3.44□□□□□ -1.86
LINC02540-201ENST00000455554 LEFTY2O00292 366 aa3.44□□□□□ -1.86
LINC02540-201ENST00000455554 ALDH1A2O94788 518 aa3.44□□□□□ -1.86
LINC02540-201ENST00000455554 ESRRBO95718 433 aa3.44□□□□□ -1.86
LINC02540-201ENST00000455554 CTGFP29279 349 aa3.44□□□□□ -1.86
LINC02540-201ENST00000455554 CASRP41180 1078 aa3.44□□□□□ -1.86
LINC02540-201ENST00000455554 MECP2P51608 486 aaKnown RBP3.44□□□□□ -1.86
LINC02540-201ENST00000455554 KRTAP10-7P60409 375 aaPredicted RBP3.44□□□□□ -1.86
LINC02540-201ENST00000455554 ADCY2Q08462 1091 aa3.44□□□□□ -1.86
LINC02540-201ENST00000455554 MRPL49Q13405 166 aaKnown RBP3.44□□□□□ -1.86
LINC02540-201ENST00000455554 EPHA7Q15375 998 aa3.44□□□□□ -1.86
LINC02540-201ENST00000455554 ABHD17BQ5VST6 288 aa3.44□□□□□ -1.86
LINC02540-201ENST00000455554 KANSL1Q7Z3B3 1105 aa3.44□□□□□ -1.86
LINC02540-201ENST00000455554 CKAP2LQ8IYA6 745 aa3.44□□□□□ -1.86
LINC02540-201ENST00000455554 SMG7Q92540 1137 aaKnown RBP3.44□□□□□ -1.86
LINC02540-201ENST00000455554 SLC9A6Q92581 669 aa3.44□□□□□ -1.86
LINC02540-201ENST00000455554 SOX7Q9BT81 388 aa3.44□□□□□ -1.86
LINC02540-201ENST00000455554 TEX101Q9BY14 249 aa3.44□□□□□ -1.86
LINC02540-201ENST00000455554 RNF7Q9UBF6 113 aa3.44□□□□□ -1.86
LINC02540-201ENST00000455554 TLK1Q9UKI8 766 aa3.44□□□□□ -1.86
LINC02540-201ENST00000455554 CLCA2Q9UQC9 943 aa3.44□□□□□ -1.86
LINC02540-201ENST00000455554 KDM2BQ8NHM5 1336 aa3.44□□□□□ -1.86
LINC02540-201ENST00000455554 PRR5-ARHGAP8B1AHC4 643 aa3.43□□□□□ -1.86
LINC02540-201ENST00000455554 DIRC3C9JPN6 131 aa3.43□□□□□ -1.86
LINC02540-201ENST00000455554 OPHN1O60890 802 aa3.43□□□□□ -1.86
LINC02540-201ENST00000455554 HLA-DOAP06340 250 aa3.43□□□□□ -1.86
LINC02540-201ENST00000455554 ZSCAN20P17040 1043 aaPredicted RBP3.43□□□□□ -1.86
LINC02540-201ENST00000455554 DDX6P26196 483 aaKnown RBP eCLIP3.43□□□□□ -1.86
LINC02540-201ENST00000455554 RNASE9P60153 205 aaKnown RBP3.43□□□□□ -1.86
LINC02540-201ENST00000455554 NHLH2Q02577 135 aa3.43□□□□□ -1.86
LINC02540-201ENST00000455554 FOXF2Q12947 444 aa3.43□□□□□ -1.86
LINC02540-201ENST00000455554 DDB1Q16531 1140 aa3.43□□□□□ -1.86
LINC02540-201ENST00000455554 FGD2Q7Z6J4 655 aa3.43□□□□□ -1.86
LINC02540-201ENST00000455554 SRRM1Q8IYB3 904 aaKnown RBP3.43□□□□□ -1.86
LINC02540-201ENST00000455554 UNC5BQ8IZJ1 945 aa3.43□□□□□ -1.86
LINC02540-201ENST00000455554 KIAA1958Q8N8K9 716 aa3.43□□□□□ -1.86
LINC02540-201ENST00000455554 PIK3C3Q8NEB9 887 aa3.43□□□□□ -1.86
LINC02540-201ENST00000455554 CAGE1Q8TC20 777 aa3.43□□□□□ -1.86
LINC02540-201ENST00000455554 SCARB1Q8WTV0 552 aa3.43□□□□□ -1.86
LINC02540-201ENST00000455554 ZNF428Q96B54 188 aa3.43□□□□□ -1.86
LINC02540-201ENST00000455554 HIST1H2AHQ96KK5 128 aa3.43□□□□□ -1.86
LINC02540-201ENST00000455554 HIST1H2AJQ99878 128 aa3.43□□□□□ -1.86
LINC02540-201ENST00000455554 NOL10Q9BSC4 688 aaKnown RBP3.43□□□□□ -1.86
LINC02540-201ENST00000455554 SETD1BQ9UPS6 1966 aaKnown RBP3.42□□□□□ -1.86
LINC02540-201ENST00000455554 H7C1D1 291 aa3.42□□□□□ -1.86
LINC02540-201ENST00000455554 M0R2C6 588 aa3.42□□□□□ -1.86
LINC02540-201ENST00000455554 KCNQ2O43526 872 aa3.42□□□□□ -1.86
LINC02540-201ENST00000455554 IGLV2-14P01704 120 aa3.42□□□□□ -1.86
LINC02540-201ENST00000455554 SPATA31D3P0C874 917 aa3.42□□□□□ -1.86
LINC02540-201ENST00000455554 HSP90B1P14625 803 aaKnown RBP3.42□□□□□ -1.86
LINC02540-201ENST00000455554 PTX3P26022 381 aaPredicted RBP3.42□□□□□ -1.86
LINC02540-201ENST00000455554 MPLP40238 635 aa3.42□□□□□ -1.86
LINC02540-201ENST00000455554 GZMKP49863 264 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms