RNA–Protein interactions for RNA: ENST00000455548.2

SMPD4-214, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 547 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-214ENST00000455548 GRIN1Q05586 938 aa17.96■□□□□ 0.47
SMPD4-214ENST00000455548 SLC39A14Q15043 492 aa17.96■□□□□ 0.47
SMPD4-214ENST00000455548 SKIV2LQ15477 1246 aaKnown RBP17.96■□□□□ 0.47
SMPD4-214ENST00000455548 MAPK6Q16659 721 aa17.96■□□□□ 0.47
SMPD4-214ENST00000455548 KLHL23Q8NBE8 558 aa17.96■□□□□ 0.47
SMPD4-214ENST00000455548 COLGALT1Q8NBJ5 622 aa17.96■□□□□ 0.47
SMPD4-214ENST00000455548 LPPQ93052 612 aa17.96■□□□□ 0.47
SMPD4-214ENST00000455548 CPB2Q96IY4 423 aa17.96■□□□□ 0.47
SMPD4-214ENST00000455548 ZNF396Q96N95 335 aaPredicted RBP17.96■□□□□ 0.47
SMPD4-214ENST00000455548 USP28Q96RU2 1077 aa17.96■□□□□ 0.47
SMPD4-214ENST00000455548 FZD8Q9H461 694 aa17.96■□□□□ 0.47
SMPD4-214ENST00000455548 C17orf75Q9HAS0 396 aa17.96■□□□□ 0.47
SMPD4-214ENST00000455548 KCND2Q9NZV8 630 aa17.96■□□□□ 0.47
SMPD4-214ENST00000455548 DAXXQ9UER7 740 aaPredicted RBP17.96■□□□□ 0.47
SMPD4-214ENST00000455548 FBXO2Q9UK22 296 aaPredicted RBP17.96■□□□□ 0.47
SMPD4-214ENST00000455548 PLAGL2Q9UPG8 496 aa17.96■□□□□ 0.47
SMPD4-214ENST00000455548 GRM6O15303 877 aa17.95■□□□□ 0.46
SMPD4-214ENST00000455548 ITGB1P05556 798 aa17.95■□□□□ 0.46
SMPD4-214ENST00000455548 PRKCBP05771 671 aa17.95■□□□□ 0.46
SMPD4-214ENST00000455548 ZSCAN22P10073 491 aaPredicted RBP17.95■□□□□ 0.46
SMPD4-214ENST00000455548 NCLP19338 710 aaKnown RBP17.95■□□□□ 0.46
SMPD4-214ENST00000455548 NASPP49321 788 aaPredicted RBP17.95■□□□□ 0.46
SMPD4-214ENST00000455548 NOMO2Q5JPE7 1267 aa17.95■□□□□ 0.46
SMPD4-214ENST00000455548 SLC27A1Q6PCB7 646 aa17.95■□□□□ 0.46
SMPD4-214ENST00000455548 AGMOQ6ZNB7 445 aa17.95■□□□□ 0.46
SMPD4-214ENST00000455548 HACE1Q8IYU2 909 aa17.95■□□□□ 0.46
SMPD4-214ENST00000455548 DAW1Q8N136 415 aa17.95■□□□□ 0.46
SMPD4-214ENST00000455548 ZNF558Q96NG5 402 aa17.95■□□□□ 0.46
SMPD4-214ENST00000455548 TRIM6Q9C030 488 aaPredicted RBP17.95■□□□□ 0.46
SMPD4-214ENST00000455548 CCSER1Q9C0I3 900 aa17.95■□□□□ 0.46
SMPD4-214ENST00000455548 ALG13Q9NP73 1137 aaKnown RBP17.95■□□□□ 0.46
SMPD4-214ENST00000455548 UBN1Q9NPG3 1134 aa17.95■□□□□ 0.46
SMPD4-214ENST00000455548 THEGQ9P2T0 379 aa17.95■□□□□ 0.46
SMPD4-214ENST00000455548 HCSTQ9UBK5 93 aa17.95■□□□□ 0.46
SMPD4-214ENST00000455548 PLXNA4Q9HCM2 1894 aa17.95■□□□□ 0.46
SMPD4-214ENST00000455548 ATG2AQ2TAZ0 1938 aa17.94■□□□□ 0.46
SMPD4-214ENST00000455548 A0A1B0GUA9 196 aa17.94■□□□□ 0.46
SMPD4-214ENST00000455548 ACKR2O00590 384 aa17.94■□□□□ 0.46
SMPD4-214ENST00000455548 B4GALT5O43286 388 aa17.94■□□□□ 0.46
SMPD4-214ENST00000455548 ITGA4P13612 1032 aa17.94■□□□□ 0.46
SMPD4-214ENST00000455548 PLCG1P19174 1290 aa17.94■□□□□ 0.46
SMPD4-214ENST00000455548 PPM1AP35813 382 aa17.94■□□□□ 0.46
SMPD4-214ENST00000455548 TXLNAP40222 546 aa17.94■□□□□ 0.46
SMPD4-214ENST00000455548 SLC12A3P55017 1021 aa17.94■□□□□ 0.46
SMPD4-214ENST00000455548 UBE3AQ05086 875 aa17.94■□□□□ 0.46
SMPD4-214ENST00000455548 DMP1Q13316 513 aaPredicted RBP17.94■□□□□ 0.46
SMPD4-214ENST00000455548 TMEM132AQ24JP5 1023 aa17.94■□□□□ 0.46
SMPD4-214ENST00000455548 LONRF3Q496Y0 759 aa17.94■□□□□ 0.46
SMPD4-214ENST00000455548 KCNT2Q6UVM3 1135 aa17.94■□□□□ 0.46
SMPD4-214ENST00000455548 LRRC55Q6ZSA7 311 aa17.94■□□□□ 0.46
SMPD4-214ENST00000455548 THNSL1Q8IYQ7 743 aa17.94■□□□□ 0.46
SMPD4-214ENST00000455548 KRI1Q8N9T8 703 aaKnown RBP17.94■□□□□ 0.46
SMPD4-214ENST00000455548 SPRYD3Q8NCJ5 442 aa17.94■□□□□ 0.46
SMPD4-214ENST00000455548 SPPL3Q8TCT6 385 aa17.94■□□□□ 0.46
SMPD4-214ENST00000455548 URGCPQ8TCY9 931 aa17.94■□□□□ 0.46
SMPD4-214ENST00000455548 EIF2AQ9BY44 585 aaKnown RBP17.94■□□□□ 0.46
SMPD4-214ENST00000455548 CCDC113Q9H0I3 377 aa17.94■□□□□ 0.46
SMPD4-214ENST00000455548 NSUN3Q9H649 340 aaKnown RBP17.94■□□□□ 0.46
SMPD4-214ENST00000455548 RSAD1Q9HA92 442 aa17.94■□□□□ 0.46
SMPD4-214ENST00000455548 POLD4Q9HCU8 107 aa17.94■□□□□ 0.46
SMPD4-214ENST00000455548 PRDM6Q9NQX0 595 aa17.94■□□□□ 0.46
SMPD4-214ENST00000455548 KCNG1Q9UIX4 513 aa17.94■□□□□ 0.46
SMPD4-214ENST00000455548 COG5Q9UP83 839 aa17.94■□□□□ 0.46
SMPD4-214ENST00000455548 RBM19Q9Y4C8 960 aaKnown RBP17.94■□□□□ 0.46
SMPD4-214ENST00000455548 IPPQ9Y573 584 aa17.94■□□□□ 0.46
SMPD4-214ENST00000455548 PHLPP2Q6ZVD8 1323 aa17.94■□□□□ 0.46
SMPD4-214ENST00000455548 CCDC169A6NNP5 214 aa17.93■□□□□ 0.46
SMPD4-214ENST00000455548 MEIS3P2A8K0S8 358 aa17.93■□□□□ 0.46
SMPD4-214ENST00000455548 N4BP3O15049 544 aa17.93■□□□□ 0.46
SMPD4-214ENST00000455548 OFD1O75665 1012 aa17.93■□□□□ 0.46
SMPD4-214ENST00000455548 FGF18O76093 207 aa17.93■□□□□ 0.46
SMPD4-214ENST00000455548 F13A1P00488 732 aa17.93■□□□□ 0.46
SMPD4-214ENST00000455548 NPTX2P47972 431 aa17.93■□□□□ 0.46
SMPD4-214ENST00000455548 PEX3P56589 373 aa17.93■□□□□ 0.46
SMPD4-214ENST00000455548 RNASELQ05823 741 aaKnown RBP17.93■□□□□ 0.46
SMPD4-214ENST00000455548 MAPK7Q13164 816 aa17.93■□□□□ 0.46
SMPD4-214ENST00000455548 PRPF4BQ13523 1007 aaKnown RBP17.93■□□□□ 0.46
SMPD4-214ENST00000455548 KARSQ15046 597 aaKnown RBP17.93■□□□□ 0.46
SMPD4-214ENST00000455548 STK38Q15208 465 aa17.93■□□□□ 0.46
SMPD4-214ENST00000455548 SMG8Q8ND04 991 aaKnown RBP17.93■□□□□ 0.46
SMPD4-214ENST00000455548 ATXN2LQ8WWM7 1075 aaKnown RBP17.93■□□□□ 0.46
SMPD4-214ENST00000455548 KANSL3Q9P2N6 904 aa17.93■□□□□ 0.46
SMPD4-214ENST00000455548 INPP5FQ9Y2H2 1132 aa17.93■□□□□ 0.46
SMPD4-214ENST00000455548 K7ERI5 159 aa17.92■□□□□ 0.46
SMPD4-214ENST00000455548 NPTXRO95502 500 aa17.92■□□□□ 0.46
SMPD4-214ENST00000455548 LIG1P18858 919 aa17.92■□□□□ 0.46
SMPD4-214ENST00000455548 FOXD4L5Q5VV16 416 aaPredicted RBP17.92■□□□□ 0.46
SMPD4-214ENST00000455548 GPBP1Q86WP2 473 aa17.92■□□□□ 0.46
SMPD4-214ENST00000455548 POF1BQ8WVV4 589 aa17.92■□□□□ 0.46
SMPD4-214ENST00000455548 FOXD4L4Q8WXT5 416 aaPredicted RBP17.92■□□□□ 0.46
SMPD4-214ENST00000455548 RAD54LQ92698 747 aa17.92■□□□□ 0.46
SMPD4-214ENST00000455548 SYMPKQ92797 1274 aaKnown RBP17.92■□□□□ 0.46
SMPD4-214ENST00000455548 PPP2R3CQ969Q6 453 aa17.92■□□□□ 0.46
SMPD4-214ENST00000455548 EPSTI1Q96J88 318 aa17.92■□□□□ 0.46
SMPD4-214ENST00000455548 ADPGKQ9BRR6 497 aa17.92■□□□□ 0.46
SMPD4-214ENST00000455548 KIFC3Q9BVG8 833 aa17.92■□□□□ 0.46
SMPD4-214ENST00000455548 TMEM134Q9H6X4 195 aa17.92■□□□□ 0.46
SMPD4-214ENST00000455548 KMT5AQ9NQR1 393 aa17.92■□□□□ 0.46
SMPD4-214ENST00000455548 BLOC1S4Q9NUP1 217 aa17.92■□□□□ 0.46
SMPD4-214ENST00000455548 TBC1D13Q9NVG8 400 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms