RNA–Protein interactions for RNA: ENST00000455228.1

LINC01940-201, Transcript of long intergenic non-protein coding RNA 1940, humanhuman

TSL 2 BASIC

Gene LINC01940, Length 3,489 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01940-201ENST00000455228 SCUBE1Q8IWY4 988 aa10.37□□□□□ -0.75
LINC01940-201ENST00000455228 MS4A14Q96JA4 679 aa10.37□□□□□ -0.75
LINC01940-201ENST00000455228 CLMNQ96JQ2 1002 aa10.37□□□□□ -0.75
LINC01940-201ENST00000455228 MCM9Q9NXL9 1143 aa10.37□□□□□ -0.75
LINC01940-201ENST00000455228 NIP7Q9Y221 180 aaKnown RBP eCLIP10.37□□□□□ -0.75
LINC01940-201ENST00000455228 ZNF652Q9Y2D9 606 aa10.37□□□□□ -0.75
LINC01940-201ENST00000455228 PFDN1O60925 122 aa10.36□□□□□ -0.75
LINC01940-201ENST00000455228 OR52Z1P0C646 297 aa10.36□□□□□ -0.75
LINC01940-201ENST00000455228 CYP2D6P10635 497 aa10.36□□□□□ -0.75
LINC01940-201ENST00000455228 TECP42680 631 aa10.36□□□□□ -0.75
LINC01940-201ENST00000455228 TFAP4Q01664 338 aa10.36□□□□□ -0.75
LINC01940-201ENST00000455228 PLCB3Q01970 1234 aa10.36□□□□□ -0.75
LINC01940-201ENST00000455228 GFPT1Q06210 699 aaPredicted RBP10.36□□□□□ -0.75
LINC01940-201ENST00000455228 DMPKQ09013 629 aa10.36□□□□□ -0.75
LINC01940-201ENST00000455228 LRP8Q14114 963 aa10.36□□□□□ -0.75
LINC01940-201ENST00000455228 SEPT6Q14141 434 aa10.36□□□□□ -0.75
LINC01940-201ENST00000455228 NONOQ15233 471 aaKnown RBP eCLIP10.36□□□□□ -0.75
LINC01940-201ENST00000455228 GALNTL6Q49A17 601 aa10.36□□□□□ -0.75
LINC01940-201ENST00000455228 NLRP9Q7RTR0 991 aa10.36□□□□□ -0.75
LINC01940-201ENST00000455228 DDX27Q96GQ7 796 aaKnown RBP10.36□□□□□ -0.75
LINC01940-201ENST00000455228 ZNHIT2Q9UHR6 403 aa10.36□□□□□ -0.75
LINC01940-201ENST00000455228 PCDHA6Q9UN73 950 aa10.36□□□□□ -0.75
LINC01940-201ENST00000455228 PCDHA8Q9Y5H6 950 aa10.36□□□□□ -0.75
LINC01940-201ENST00000455228 HLTFQ14527 1009 aaKnown RBP eCLIP10.36□□□□□ -0.75
LINC01940-201ENST00000455228 MSL1Q68DK7 614 aa10.36□□□□□ -0.75
LINC01940-201ENST00000455228 RUFY4Q6ZNE9 571 aa10.36□□□□□ -0.75
LINC01940-201ENST00000455228 Q6ZNX1 250 aa10.36□□□□□ -0.75
LINC01940-201ENST00000455228 ASRGL1Q7L266 308 aa10.36□□□□□ -0.75
LINC01940-201ENST00000455228 ZSCAN29Q8IWY8 852 aaPredicted RBP10.36□□□□□ -0.75
LINC01940-201ENST00000455228 AK8Q96MA6 479 aa10.36□□□□□ -0.75
LINC01940-201ENST00000455228 SLC4A9Q96Q91 983 aa10.36□□□□□ -0.75
LINC01940-201ENST00000455228 QTRT2Q9H974 415 aaKnown RBP10.36□□□□□ -0.75
LINC01940-201ENST00000455228 MKNK2Q9HBH9 465 aa10.36□□□□□ -0.75
LINC01940-201ENST00000455228 DCP1AQ9NPI6 582 aaPredicted RBP10.36□□□□□ -0.75
LINC01940-201ENST00000455228 SLC12A6Q9UHW9 1150 aa10.36□□□□□ -0.75
LINC01940-201ENST00000455228 AFF2P51816 1311 aa10.36□□□□□ -0.75
LINC01940-201ENST00000455228 DGKIO75912 1065 aa10.35□□□□□ -0.75
LINC01940-201ENST00000455228 GLI1P08151 1106 aa10.35□□□□□ -0.75
LINC01940-201ENST00000455228 ETV3P41162 512 aa10.35□□□□□ -0.75
LINC01940-201ENST00000455228 CARSP49589 748 aaKnown RBP10.35□□□□□ -0.75
LINC01940-201ENST00000455228 GUCY1A3Q02108 690 aa10.35□□□□□ -0.75
LINC01940-201ENST00000455228 ITGB3BPQ13352 177 aaPredicted RBP10.35□□□□□ -0.75
LINC01940-201ENST00000455228 MAN2A1Q16706 1144 aa10.35□□□□□ -0.75
LINC01940-201ENST00000455228 CEP128Q6ZU80 1094 aa10.35□□□□□ -0.75
LINC01940-201ENST00000455228 SV2BQ7L1I2 683 aa10.35□□□□□ -0.75
LINC01940-201ENST00000455228 DYMQ7RTS9 669 aa10.35□□□□□ -0.75
LINC01940-201ENST00000455228 LINC00469Q8N7U9 141 aa10.35□□□□□ -0.75
LINC01940-201ENST00000455228 CENPTQ96BT3 561 aa10.35□□□□□ -0.75
LINC01940-201ENST00000455228 EFHD2Q96C19 240 aaPredicted RBP10.35□□□□□ -0.75
LINC01940-201ENST00000455228 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.35□□□□□ -0.75
LINC01940-201ENST00000455228 NLRC4Q9NPP4 1024 aa10.35□□□□□ -0.75
LINC01940-201ENST00000455228 ARHGEF3Q9NR81 526 aa10.35□□□□□ -0.75
LINC01940-201ENST00000455228 DDX43Q9NXZ2 648 aaKnown RBP10.35□□□□□ -0.75
LINC01940-201ENST00000455228 SAP30BPQ9UHR5 308 aaKnown RBP10.35□□□□□ -0.75
LINC01940-201ENST00000455228 STX8Q9UNK0 236 aa10.35□□□□□ -0.75
LINC01940-201ENST00000455228 EPHB6O15197 1021 aa10.35□□□□□ -0.75
LINC01940-201ENST00000455228 IDH3BO43837 385 aa10.35□□□□□ -0.75
LINC01940-201ENST00000455228 FGRP09769 529 aa10.35□□□□□ -0.75
LINC01940-201ENST00000455228 NR1D1P20393 614 aa10.35□□□□□ -0.75
LINC01940-201ENST00000455228 CDC25CP30307 473 aa10.35□□□□□ -0.75
LINC01940-201ENST00000455228 HPDP32754 393 aaPredicted RBP10.35□□□□□ -0.75
LINC01940-201ENST00000455228 NAPAP54920 295 aa10.35□□□□□ -0.75
LINC01940-201ENST00000455228 GSTA3Q16772 222 aa10.35□□□□□ -0.75
LINC01940-201ENST00000455228 MYLK3Q32MK0 819 aa10.35□□□□□ -0.75
LINC01940-201ENST00000455228 KAZNQ674X7 775 aa10.35□□□□□ -0.75
LINC01940-201ENST00000455228 ARHGAP27Q6ZUM4 889 aa10.35□□□□□ -0.75
LINC01940-201ENST00000455228 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.35□□□□□ -0.75
LINC01940-201ENST00000455228 FAM186BQ8IYM0 893 aa10.35□□□□□ -0.75
LINC01940-201ENST00000455228 SAMD14Q8IZD0 417 aaPredicted RBP10.35□□□□□ -0.75
LINC01940-201ENST00000455228 RBM46Q8TBY0 533 aaKnown RBP10.35□□□□□ -0.75
LINC01940-201ENST00000455228 SEC16BQ96JE7 1060 aa10.35□□□□□ -0.75
LINC01940-201ENST00000455228 C12orf10Q9HB07 376 aa10.35□□□□□ -0.75
LINC01940-201ENST00000455228 CRNNQ9UBG3 495 aaPredicted RBP10.35□□□□□ -0.75
LINC01940-201ENST00000455228 RPL26L1Q9UNX3 145 aaKnown RBP10.35□□□□□ -0.75
LINC01940-201ENST00000455228 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.35□□□□□ -0.75
LINC01940-201ENST00000455228 BAZ2AQ9UIF9 1905 aaKnown RBP10.35□□□□□ -0.75
LINC01940-201ENST00000455228 COL5A2P05997 1499 aaPredicted RBP10.35□□□□□ -0.75
LINC01940-201ENST00000455228 POTEFA5A3E0 1075 aa10.35□□□□□ -0.75
LINC01940-201ENST00000455228 ASAP2O43150 1006 aa10.35□□□□□ -0.75
LINC01940-201ENST00000455228 TSPAN1O60635 241 aa10.35□□□□□ -0.75
LINC01940-201ENST00000455228 SUPT3HO75486 399 aa10.35□□□□□ -0.75
LINC01940-201ENST00000455228 PDE6BP35913 854 aa10.35□□□□□ -0.75
LINC01940-201ENST00000455228 SLC1A4P43007 532 aa10.35□□□□□ -0.75
LINC01940-201ENST00000455228 B2MP61769 119 aa10.35□□□□□ -0.75
LINC01940-201ENST00000455228 BASP1P80723 227 aaKnown RBP10.35□□□□□ -0.75
LINC01940-201ENST00000455228 MCL1Q07820 350 aa10.35□□□□□ -0.75
LINC01940-201ENST00000455228 ARL13BQ3SXY8 428 aa10.35□□□□□ -0.75
LINC01940-201ENST00000455228 KRT12Q99456 494 aa10.35□□□□□ -0.75
LINC01940-201ENST00000455228 TLR10Q9BXR5 811 aa10.35□□□□□ -0.75
LINC01940-201ENST00000455228 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.35□□□□□ -0.75
LINC01940-201ENST00000455228 ARPP21Q9UBL0 812 aaPredicted RBP10.35□□□□□ -0.75
LINC01940-201ENST00000455228 GIT1Q9Y2X7 761 aa10.35□□□□□ -0.75
LINC01940-201ENST00000455228 WTIPA6NIX2 430 aaPredicted RBP10.34□□□□□ -0.75
LINC01940-201ENST00000455228 E7EVH7 732 aa10.34□□□□□ -0.75
LINC01940-201ENST00000455228 CYP1A2P05177 515 aa10.34□□□□□ -0.75
LINC01940-201ENST00000455228 HNRNPH3P31942 346 aaKnown RBP10.34□□□□□ -0.75
LINC01940-201ENST00000455228 PPARDQ03181 441 aa10.34□□□□□ -0.75
LINC01940-201ENST00000455228 ARID5AQ03989 594 aa10.34□□□□□ -0.75
LINC01940-201ENST00000455228 SLC9C1Q4G0N8 1177 aa10.34□□□□□ -0.75
LINC01940-201ENST00000455228 MCF2L2Q86YR7 1114 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms