RNA–Protein interactions for RNA: ENST00000455220.6

CCDC90B-202, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-202ENST00000455220 AMHR2Q16671 573 aa18.22■□□□□ 0.51
CCDC90B-202ENST00000455220 ZNF618Q5T7W0 954 aa18.22■□□□□ 0.51
CCDC90B-202ENST00000455220 KLHL10Q6JEL2 608 aa18.22■□□□□ 0.51
CCDC90B-202ENST00000455220 TMEM40Q8WWA1 233 aa18.22■□□□□ 0.51
CCDC90B-202ENST00000455220 NELFBQ8WX92 580 aa18.22■□□□□ 0.51
CCDC90B-202ENST00000455220 P2RX5Q93086 422 aa18.22■□□□□ 0.51
CCDC90B-202ENST00000455220 PRIMPOLQ96LW4 560 aa18.22■□□□□ 0.51
CCDC90B-202ENST00000455220 MED15Q96RN5 788 aa18.22■□□□□ 0.51
CCDC90B-202ENST00000455220 INO80BQ9C086 356 aaPredicted RBP18.22■□□□□ 0.51
CCDC90B-202ENST00000455220 NAT10Q9H0A0 1025 aaKnown RBP18.22■□□□□ 0.51
CCDC90B-202ENST00000455220 SEMA6BQ9H3T3 888 aa18.22■□□□□ 0.51
CCDC90B-202ENST00000455220 PRMT7Q9NVM4 692 aaPredicted RBP18.22■□□□□ 0.51
CCDC90B-202ENST00000455220 RWDD2AQ9UIY3 292 aa18.22■□□□□ 0.51
CCDC90B-202ENST00000455220 EXOC7Q9UPT5 735 aa18.22■□□□□ 0.51
CCDC90B-202ENST00000455220 GINS2Q9Y248 185 aa18.22■□□□□ 0.51
CCDC90B-202ENST00000455220 ACKR2O00590 384 aa18.21■□□□□ 0.51
CCDC90B-202ENST00000455220 TGFB1I1O43294 461 aa18.21■□□□□ 0.51
CCDC90B-202ENST00000455220 EDN1P05305 212 aa18.21■□□□□ 0.51
CCDC90B-202ENST00000455220 GBP3Q9H0R5 595 aa18.21■□□□□ 0.51
CCDC90B-202ENST00000455220 TYW1Q9NV66 732 aaKnown RBP18.21■□□□□ 0.51
CCDC90B-202ENST00000455220 TBX21Q9UL17 535 aa18.21■□□□□ 0.51
CCDC90B-202ENST00000455220 CTNND2Q9UQB3 1225 aa18.21■□□□□ 0.51
CCDC90B-202ENST00000455220 TRAF3IP3Q9Y228 551 aa18.21■□□□□ 0.51
CCDC90B-202ENST00000455220 ATP11BQ9Y2G3 1177 aa18.21■□□□□ 0.51
CCDC90B-202ENST00000455220 PDXKO00764 312 aa18.21■□□□□ 0.51
CCDC90B-202ENST00000455220 ZNF165P49910 485 aa18.21■□□□□ 0.51
CCDC90B-202ENST00000455220 PMS1P54277 932 aaKnown RBP18.21■□□□□ 0.51
CCDC90B-202ENST00000455220 SNRPFP62306 86 aaKnown RBP18.21■□□□□ 0.51
CCDC90B-202ENST00000455220 TTI2Q6NXR4 508 aa18.21■□□□□ 0.51
CCDC90B-202ENST00000455220 NOC4LQ9BVI4 516 aaKnown RBP18.21■□□□□ 0.51
CCDC90B-202ENST00000455220 SQORQ9Y6N5 450 aa18.21■□□□□ 0.51
CCDC90B-202ENST00000455220 BICDL2A1A5D9 508 aa18.2■□□□□ 0.5
CCDC90B-202ENST00000455220 CSDE1O75534 798 aaKnown RBP18.2■□□□□ 0.5
CCDC90B-202ENST00000455220 LRRC63Q05C16 580 aa18.2■□□□□ 0.5
CCDC90B-202ENST00000455220 FBXO47Q5MNV8 452 aa18.2■□□□□ 0.5
CCDC90B-202ENST00000455220 ZPBP2Q6X784 338 aa18.2■□□□□ 0.5
CCDC90B-202ENST00000455220 FAM200AQ8TCP9 573 aa18.2■□□□□ 0.5
CCDC90B-202ENST00000455220 TMEM174Q8WUU8 243 aa18.2■□□□□ 0.5
CCDC90B-202ENST00000455220 MRPL4Q9BYD3 311 aaKnown RBP18.2■□□□□ 0.5
CCDC90B-202ENST00000455220 IKZF4Q9H2S9 585 aa18.2■□□□□ 0.5
CCDC90B-202ENST00000455220 CGNQ9P2M7 1197 aaKnown RBP18.2■□□□□ 0.5
CCDC90B-202ENST00000455220 CNTNAP2Q9UHC6 1331 aa18.2■□□□□ 0.5
CCDC90B-202ENST00000455220 TANC1Q9C0D5 1861 aa18.19■□□□□ 0.5
CCDC90B-202ENST00000455220 ALPK3Q96L96 1907 aa18.19■□□□□ 0.5
CCDC90B-202ENST00000455220 TRIM49BA6NDI0 452 aa18.19■□□□□ 0.5
CCDC90B-202ENST00000455220 TTLL13PA6NNM8 815 aa18.19■□□□□ 0.5
CCDC90B-202ENST00000455220 TSPAN1O60635 241 aa18.19■□□□□ 0.5
CCDC90B-202ENST00000455220 CLTBP09497 229 aa18.19■□□□□ 0.5
CCDC90B-202ENST00000455220 SELPP16109 830 aa18.19■□□□□ 0.5
CCDC90B-202ENST00000455220 SFPQP23246 707 aaKnown RBP eCLIP18.19■□□□□ 0.5
CCDC90B-202ENST00000455220 NFIL3Q16649 462 aa18.19■□□□□ 0.5
CCDC90B-202ENST00000455220 EDRF1Q3B7T1 1238 aa18.19■□□□□ 0.5
CCDC90B-202ENST00000455220 ANKRD40Q6AI12 368 aa18.19■□□□□ 0.5
CCDC90B-202ENST00000455220 SLC39A4Q6P5W5 647 aa18.19■□□□□ 0.5
CCDC90B-202ENST00000455220 LRRC8DQ7L1W4 858 aa18.19■□□□□ 0.5
CCDC90B-202ENST00000455220 HS2ST1Q7LGA3 356 aa18.19■□□□□ 0.5
CCDC90B-202ENST00000455220 GAS2L3Q86XJ1 694 aa18.19■□□□□ 0.5
CCDC90B-202ENST00000455220 SYCP3Q8IZU3 236 aa18.19■□□□□ 0.5
CCDC90B-202ENST00000455220 GOLGA5Q8TBA6 731 aa18.19■□□□□ 0.5
CCDC90B-202ENST00000455220 ENOX1Q8TC92 643 aaKnown RBP18.19■□□□□ 0.5
CCDC90B-202ENST00000455220 AGPAT3Q9NRZ7 376 aa18.19■□□□□ 0.5
CCDC90B-202ENST00000455220 NOC2LQ9Y3T9 749 aaKnown RBP18.19■□□□□ 0.5
CCDC90B-202ENST00000455220 STYXL1Q9Y6J8 313 aa18.19■□□□□ 0.5
CCDC90B-202ENST00000455220 HNRNPDLO14979 420 aaKnown RBP18.18■□□□□ 0.5
CCDC90B-202ENST00000455220 B4GALT5O43286 388 aa18.18■□□□□ 0.5
CCDC90B-202ENST00000455220 CALUO43852 315 aaPredicted RBP18.18■□□□□ 0.5
CCDC90B-202ENST00000455220 STX17P56962 302 aa18.18■□□□□ 0.5
CCDC90B-202ENST00000455220 PRPF4BQ13523 1007 aaKnown RBP18.18■□□□□ 0.5
CCDC90B-202ENST00000455220 MBTPS1Q14703 1052 aa18.18■□□□□ 0.5
CCDC90B-202ENST00000455220 IQCB1Q15051 598 aa18.18■□□□□ 0.5
CCDC90B-202ENST00000455220 TSHZ1Q6ZSZ6 1077 aa18.18■□□□□ 0.5
CCDC90B-202ENST00000455220 FAM228AQ86W67 206 aa18.18■□□□□ 0.5
CCDC90B-202ENST00000455220 C12orf56Q8IXR9 622 aa18.18■□□□□ 0.5
CCDC90B-202ENST00000455220 ZC3H3Q8IXZ2 948 aaKnown RBP18.18■□□□□ 0.5
CCDC90B-202ENST00000455220 USP38Q8NB14 1042 aa18.18■□□□□ 0.5
CCDC90B-202ENST00000455220 ACO2Q99798 780 aaKnown RBP18.18■□□□□ 0.5
CCDC90B-202ENST00000455220 TSG101Q99816 390 aa18.18■□□□□ 0.5
CCDC90B-202ENST00000455220 DUSP9Q99956 384 aaKnown RBP18.18■□□□□ 0.5
CCDC90B-202ENST00000455220 TARS2Q9BW92 718 aaKnown RBP18.18■□□□□ 0.5
CCDC90B-202ENST00000455220 HIPK3Q9H422 1215 aa18.18■□□□□ 0.5
CCDC90B-202ENST00000455220 CBX8Q9HC52 389 aa18.18■□□□□ 0.5
CCDC90B-202ENST00000455220 ANKRD63C9JTQ0 380 aa18.17■□□□□ 0.5
CCDC90B-202ENST00000455220 IKBKBO14920 756 aa18.17■□□□□ 0.5
CCDC90B-202ENST00000455220 ERLIN2O94905 339 aa18.17■□□□□ 0.5
CCDC90B-202ENST00000455220 FGFR4P22455 802 aa18.17■□□□□ 0.5
CCDC90B-202ENST00000455220 PROZP22891 400 aa18.17■□□□□ 0.5
CCDC90B-202ENST00000455220 LIG4P49917 911 aa18.17■□□□□ 0.5
CCDC90B-202ENST00000455220 MYL5Q02045 173 aa18.17■□□□□ 0.5
CCDC90B-202ENST00000455220 LPIN1Q14693 890 aa18.17■□□□□ 0.5
CCDC90B-202ENST00000455220 NCAPHQ15003 741 aa18.17■□□□□ 0.5
CCDC90B-202ENST00000455220 CATSPER4Q7RTX7 472 aa18.17■□□□□ 0.5
CCDC90B-202ENST00000455220 DHX40Q8IX18 779 aaKnown RBP18.17■□□□□ 0.5
CCDC90B-202ENST00000455220 BICD1Q96G01 975 aa18.17■□□□□ 0.5
CCDC90B-202ENST00000455220 PTPRHQ9HD43 1115 aa18.17■□□□□ 0.5
CCDC90B-202ENST00000455220 USP20Q9Y2K6 914 aa18.17■□□□□ 0.5
CCDC90B-202ENST00000455220 TISP43B9A030 160 aa18.17■□□□□ 0.5
CCDC90B-202ENST00000455220 ABLIM1O14639 778 aa18.17■□□□□ 0.5
CCDC90B-202ENST00000455220 RPS6KA5O75582 802 aa18.17■□□□□ 0.5
CCDC90B-202ENST00000455220 TOM1L1O75674 476 aa18.17■□□□□ 0.5
CCDC90B-202ENST00000455220 ARF4P18085 180 aaPredicted RBP18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms