RNA–Protein interactions for RNA: ENST00000454850.1

CLCN4-204, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 3

Gene CLCN4, Length 487 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-204ENST00000454850 GLUD1P00367 558 aa11.13□□□□□ -0.63
CLCN4-204ENST00000454850 POMCP01189 267 aa11.13□□□□□ -0.63
CLCN4-204ENST00000454850 ADH1AP07327 375 aa11.13□□□□□ -0.63
CLCN4-204ENST00000454850 CDC27P30260 824 aa11.13□□□□□ -0.63
CLCN4-204ENST00000454850 DNM2P50570 870 aa11.13□□□□□ -0.63
CLCN4-204ENST00000454850 TARBP2Q15633 366 aaKnown RBP11.13□□□□□ -0.63
CLCN4-204ENST00000454850 PFKFB3Q16875 520 aaPredicted RBP11.13□□□□□ -0.63
CLCN4-204ENST00000454850 RSPO4Q2I0M5 234 aaPredicted RBP11.13□□□□□ -0.63
CLCN4-204ENST00000454850 POTEGQ6S5H5 508 aa11.13□□□□□ -0.63
CLCN4-204ENST00000454850 GET4Q7L5D6 327 aaPredicted RBP11.13□□□□□ -0.63
CLCN4-204ENST00000454850 TAS1R1Q7RTX1 841 aa11.13□□□□□ -0.63
CLCN4-204ENST00000454850 C1orf210Q8IVY1 113 aa11.13□□□□□ -0.63
CLCN4-204ENST00000454850 RSPH1Q8WYR4 309 aa11.13□□□□□ -0.63
CLCN4-204ENST00000454850 PGBD4Q96DM1 585 aa11.13□□□□□ -0.63
CLCN4-204ENST00000454850 TRAIPQ9BWF2 469 aa11.13□□□□□ -0.63
CLCN4-204ENST00000454850 TEKT3Q9BXF9 490 aa11.13□□□□□ -0.63
CLCN4-204ENST00000454850 FOXQ1Q9C009 403 aa11.13□□□□□ -0.63
CLCN4-204ENST00000454850 PIDD1Q9HB75 910 aa11.13□□□□□ -0.63
CLCN4-204ENST00000454850 C6orf50Q9HD87 102 aa11.13□□□□□ -0.63
CLCN4-204ENST00000454850 WDR6Q9NNW5 1121 aaKnown RBP11.13□□□□□ -0.63
CLCN4-204ENST00000454850 ANO2Q9NQ90 1003 aa11.13□□□□□ -0.63
CLCN4-204ENST00000454850 ARHGEF3Q9NR81 526 aa11.13□□□□□ -0.63
CLCN4-204ENST00000454850 SUCLA2Q9P2R7 463 aaPredicted RBP11.13□□□□□ -0.63
CLCN4-204ENST00000454850 EPS15L1Q9UBC2 864 aa11.13□□□□□ -0.63
CLCN4-204ENST00000454850 SIT1Q9Y3P8 196 aa11.13□□□□□ -0.63
CLCN4-204ENST00000454850 PCDHB2Q9Y5E7 798 aa11.13□□□□□ -0.63
CLCN4-204ENST00000454850 NRP1O14786 923 aa11.12□□□□□ -0.63
CLCN4-204ENST00000454850 TEX28O15482 410 aa11.12□□□□□ -0.63
CLCN4-204ENST00000454850 LILRB3O75022 631 aa11.12□□□□□ -0.63
CLCN4-204ENST00000454850 SOD2P04179 222 aa11.12□□□□□ -0.63
CLCN4-204ENST00000454850 ALDH2P05091 517 aa11.12□□□□□ -0.63
CLCN4-204ENST00000454850 OR1G1P47890 313 aa11.12□□□□□ -0.63
CLCN4-204ENST00000454850 JAK3P52333 1124 aa11.12□□□□□ -0.63
CLCN4-204ENST00000454850 NECTIN1Q15223 517 aa11.12□□□□□ -0.63
CLCN4-204ENST00000454850 LRCH2Q5VUJ6 765 aa11.12□□□□□ -0.63
CLCN4-204ENST00000454850 ELMSAN1Q6PJG2 1045 aa11.12□□□□□ -0.63
CLCN4-204ENST00000454850 DCLRE1AQ6PJP8 1040 aa11.12□□□□□ -0.63
CLCN4-204ENST00000454850 AGMOQ6ZNB7 445 aa11.12□□□□□ -0.63
CLCN4-204ENST00000454850 MIER3Q7Z3K6 550 aa11.12□□□□□ -0.63
CLCN4-204ENST00000454850 ZNF410Q86VK4 478 aa11.12□□□□□ -0.63
CLCN4-204ENST00000454850 PALB2Q86YC2 1186 aa11.12□□□□□ -0.63
CLCN4-204ENST00000454850 GLYCTKQ8IVS8 523 aa11.12□□□□□ -0.63
CLCN4-204ENST00000454850 CMASQ8NFW8 434 aaPredicted RBP11.12□□□□□ -0.63
CLCN4-204ENST00000454850 CCDC136Q96JN2 1154 aa11.12□□□□□ -0.63
CLCN4-204ENST00000454850 RPS6KC1Q96S38 1066 aa11.12□□□□□ -0.63
CLCN4-204ENST00000454850 ESYT1Q9BSJ8 1104 aa11.12□□□□□ -0.63
CLCN4-204ENST00000454850 HERC2P3Q9BVR0 1158 aa11.12□□□□□ -0.63
CLCN4-204ENST00000454850 INO80BQ9C086 356 aaPredicted RBP11.12□□□□□ -0.63
CLCN4-204ENST00000454850 ZMYND12Q9H0C1 365 aa11.12□□□□□ -0.63
CLCN4-204ENST00000454850 RSAD1Q9HA92 442 aa11.12□□□□□ -0.63
CLCN4-204ENST00000454850 FAM217BQ9NTX9 383 aaPredicted RBP11.12□□□□□ -0.63
CLCN4-204ENST00000454850 DLL3Q9NYJ7 618 aa11.12□□□□□ -0.63
CLCN4-204ENST00000454850 DLGAP2Q9P1A6 1054 aa11.12□□□□□ -0.63
CLCN4-204ENST00000454850 STK39Q9UEW8 545 aa11.12□□□□□ -0.63
CLCN4-204ENST00000454850 USP24Q9UPU5 2620 aa11.12□□□□□ -0.63
CLCN4-204ENST00000454850 ESYT2A0FGR8 921 aa11.11□□□□□ -0.63
CLCN4-204ENST00000454850 DDX11L8A8MPP1 907 aa11.11□□□□□ -0.63
CLCN4-204ENST00000454850 KINO60870 393 aaKnown RBP11.11□□□□□ -0.63
CLCN4-204ENST00000454850 ZNF623O75123 536 aa11.11□□□□□ -0.63
CLCN4-204ENST00000454850 GLULP15104 373 aa11.11□□□□□ -0.63
CLCN4-204ENST00000454850 SFNP31947 248 aa11.11□□□□□ -0.63
CLCN4-204ENST00000454850 CIITAP33076 1130 aa11.11□□□□□ -0.63
CLCN4-204ENST00000454850 ADD1P35611 737 aaKnown RBP11.11□□□□□ -0.63
CLCN4-204ENST00000454850 GLUD2P49448 558 aa11.11□□□□□ -0.63
CLCN4-204ENST00000454850 CDC42EP1Q00587 391 aa11.11□□□□□ -0.63
CLCN4-204ENST00000454850 XKR3Q5GH77 459 aa11.11□□□□□ -0.63
CLCN4-204ENST00000454850 PLA2G4FQ68DD2 849 aa11.11□□□□□ -0.63
CLCN4-204ENST00000454850 PHLDB3Q6NSJ2 640 aa11.11□□□□□ -0.63
CLCN4-204ENST00000454850 PJA1Q8NG27 643 aa11.11□□□□□ -0.63
CLCN4-204ENST00000454850 CCDC12Q8WUD4 166 aaPredicted RBP11.11□□□□□ -0.63
CLCN4-204ENST00000454850 ZNF707Q96C28 371 aaPredicted RBP11.11□□□□□ -0.63
CLCN4-204ENST00000454850 B3GALT6Q96L58 329 aa11.11□□□□□ -0.63
CLCN4-204ENST00000454850 TMEM175Q9BSA9 504 aa11.11□□□□□ -0.63
CLCN4-204ENST00000454850 AGPAT5Q9NUQ2 364 aa11.11□□□□□ -0.63
CLCN4-204ENST00000454850 MARCH5Q9NX47 278 aa11.11□□□□□ -0.63
CLCN4-204ENST00000454850 NCDNQ9UBB6 729 aa11.11□□□□□ -0.63
CLCN4-204ENST00000454850 DPP7Q9UHL4 492 aa11.11□□□□□ -0.63
CLCN4-204ENST00000454850 NUMBLQ9Y6R0 609 aa11.11□□□□□ -0.63
CLCN4-204ENST00000454850 CNTNAP2Q9UHC6 1331 aa11.1□□□□□ -0.63
CLCN4-204ENST00000454850 CNOT1A5YKK6 2376 aaKnown RBP11.1□□□□□ -0.63
CLCN4-204ENST00000454850 IGKV6-21A0A0C4DH24 114 aa11.1□□□□□ -0.63
CLCN4-204ENST00000454850 F8W810 466 aa11.1□□□□□ -0.63
CLCN4-204ENST00000454850 LAMP2P13473 410 aa11.1□□□□□ -0.63
CLCN4-204ENST00000454850 GNA11P29992 359 aa11.1□□□□□ -0.63
CLCN4-204ENST00000454850 FGD1P98174 961 aa11.1□□□□□ -0.63
CLCN4-204ENST00000454850 EXOSC10Q01780 885 aaKnown RBP11.1□□□□□ -0.63
CLCN4-204ENST00000454850 HTR4Q13639 388 aa11.1□□□□□ -0.63
CLCN4-204ENST00000454850 SUMF1Q8NBK3 374 aa11.1□□□□□ -0.63
CLCN4-204ENST00000454850 SLC5A5Q92911 643 aa11.1□□□□□ -0.63
CLCN4-204ENST00000454850 PHKBQ93100 1093 aa11.1□□□□□ -0.63
CLCN4-204ENST00000454850 NXPE3Q969Y0 559 aa11.1□□□□□ -0.63
CLCN4-204ENST00000454850 CEP89Q96ST8 783 aa11.1□□□□□ -0.63
CLCN4-204ENST00000454850 RIT2Q99578 217 aa11.1□□□□□ -0.63
CLCN4-204ENST00000454850 NIFKQ9BYG3 293 aaKnown RBP11.1□□□□□ -0.63
CLCN4-204ENST00000454850 BMP2KQ9NSY1 1161 aaPredicted RBP11.1□□□□□ -0.63
CLCN4-204ENST00000454850 SPATA6Q9NWH7 488 aaPredicted RBP11.1□□□□□ -0.63
CLCN4-204ENST00000454850 KANSL3Q9P2N6 904 aa11.1□□□□□ -0.63
CLCN4-204ENST00000454850 SSX2IPQ9Y2D8 614 aa11.1□□□□□ -0.63
CLCN4-204ENST00000454850 VWA8A3KMH1 1905 aa11.09□□□□□ -0.63
CLCN4-204ENST00000454850 NOTCH4Q99466 2003 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms