RNA–Protein interactions for RNA: ENST00000454830.6

CLK3-203, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 3,787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-203ENST00000454830 N4BP1O75113 896 aaKnown RBP14.82□□□□□ -0.04
CLK3-203ENST00000454830 TCF7P36402 384 aaPredicted RBP14.82□□□□□ -0.04
CLK3-203ENST00000454830 NEDD9Q14511 834 aa14.82□□□□□ -0.04
CLK3-203ENST00000454830 PAPD7Q5XG87 772 aaKnown RBP14.82□□□□□ -0.04
CLK3-203ENST00000454830 FBXO16Q8IX29 292 aaPredicted RBP14.82□□□□□ -0.04
CLK3-203ENST00000454830 OSBPL9Q96SU4 736 aa14.82□□□□□ -0.04
CLK3-203ENST00000454830 XPNPEP1Q9NQW7 623 aa14.82□□□□□ -0.04
CLK3-203ENST00000454830 SNX12Q9UMY4 172 aa14.82□□□□□ -0.04
CLK3-203ENST00000454830 AGTPBP1Q9UPW5 1226 aa14.82□□□□□ -0.04
CLK3-203ENST00000454830 A0A0G2JLL6 359 aaPredicted RBP14.81□□□□□ -0.04
CLK3-203ENST00000454830 F8VZ95 297 aa14.81□□□□□ -0.04
CLK3-203ENST00000454830 FOXN3O00409 490 aaPredicted RBP14.81□□□□□ -0.04
CLK3-203ENST00000454830 NFASCO94856 1347 aa14.81□□□□□ -0.04
CLK3-203ENST00000454830 NCKAP1LP55160 1127 aa14.81□□□□□ -0.04
CLK3-203ENST00000454830 USP50Q70EL3 339 aaPredicted RBP14.81□□□□□ -0.04
CLK3-203ENST00000454830 PRRT2Q7Z6L0 340 aaPredicted RBP14.81□□□□□ -0.04
CLK3-203ENST00000454830 SLC9A9Q8IVB4 645 aa14.81□□□□□ -0.04
CLK3-203ENST00000454830 GDAP1L1Q96MZ0 367 aa14.81□□□□□ -0.04
CLK3-203ENST00000454830 PNKPQ96T60 521 aa14.81□□□□□ -0.04
CLK3-203ENST00000454830 OGFRQ9NZT2 677 aa14.81□□□□□ -0.04
CLK3-203ENST00000454830 SRGAP2CP0DJJ0 459 aa14.81□□□□□ -0.04
CLK3-203ENST00000454830 ACOT2P49753 483 aa14.81□□□□□ -0.04
CLK3-203ENST00000454830 FAM160B1Q5W0V3 765 aa14.81□□□□□ -0.04
CLK3-203ENST00000454830 PHLDB3Q6NSJ2 640 aa14.81□□□□□ -0.04
CLK3-203ENST00000454830 FASTKD5Q7L8L6 764 aaKnown RBP14.81□□□□□ -0.04
CLK3-203ENST00000454830 USP37Q86T82 979 aa14.81□□□□□ -0.04
CLK3-203ENST00000454830 ZNF446Q9NWS9 450 aa14.81□□□□□ -0.04
CLK3-203ENST00000454830 TRPC6Q9Y210 931 aa14.81□□□□□ -0.04
CLK3-203ENST00000454830 LCA5LO95447 670 aa14.81□□□□□ -0.04
CLK3-203ENST00000454830 KRT5P13647 590 aa14.81□□□□□ -0.04
CLK3-203ENST00000454830 DHX37Q8IY37 1157 aaKnown RBP14.81□□□□□ -0.04
CLK3-203ENST00000454830 KAT5Q92993 513 aa14.81□□□□□ -0.04
CLK3-203ENST00000454830 EFCC1Q9HA90 598 aa14.81□□□□□ -0.04
CLK3-203ENST00000454830 ADGRA3Q8IWK6 1321 aa14.8□□□□□ -0.04
CLK3-203ENST00000454830 IGSF9BQ9UPX0 1349 aa14.8□□□□□ -0.04
CLK3-203ENST00000454830 TCP1P17987 556 aaKnown RBP14.8□□□□□ -0.04
CLK3-203ENST00000454830 IGBP1P78318 339 aa14.8□□□□□ -0.04
CLK3-203ENST00000454830 NFIL3Q16649 462 aa14.8□□□□□ -0.04
CLK3-203ENST00000454830 ZNF662Q6ZS27 426 aa14.8□□□□□ -0.04
CLK3-203ENST00000454830 MAP4K3Q8IVH8 894 aa14.8□□□□□ -0.04
CLK3-203ENST00000454830 ARHGEF19Q8IW93 802 aa14.8□□□□□ -0.04
CLK3-203ENST00000454830 KRT222Q8N1A0 295 aa14.8□□□□□ -0.04
CLK3-203ENST00000454830 MS4A14Q96JA4 679 aa14.8□□□□□ -0.04
CLK3-203ENST00000454830 SENP7Q9BQF6 1050 aa14.8□□□□□ -0.04
CLK3-203ENST00000454830 DDX41Q9UJV9 622 aaKnown RBP14.8□□□□□ -0.04
CLK3-203ENST00000454830 ADSSP30520 456 aa14.8□□□□□ -0.04
CLK3-203ENST00000454830 NAB2Q15742 525 aa14.8□□□□□ -0.04
CLK3-203ENST00000454830 METTL13Q8N6R0 699 aa14.8□□□□□ -0.04
CLK3-203ENST00000454830 CTNNBL1Q8WYA6 563 aaPredicted RBP14.8□□□□□ -0.04
CLK3-203ENST00000454830 STRA6Q9BX79 667 aa14.8□□□□□ -0.04
CLK3-203ENST00000454830 TMEM117Q9H0C3 514 aa14.8□□□□□ -0.04
CLK3-203ENST00000454830 PDE2AO00408 941 aaPredicted RBP14.8□□□□□ -0.04
CLK3-203ENST00000454830 SEZ6Q53EL9 994 aa14.8□□□□□ -0.04
CLK3-203ENST00000454830 CC2D1AQ6P1N0 951 aaPredicted RBP14.8□□□□□ -0.04
CLK3-203ENST00000454830 RNF10Q8N5U6 811 aaKnown RBP14.8□□□□□ -0.04
CLK3-203ENST00000454830 SEPT1Q8WYJ6 367 aa14.8□□□□□ -0.04
CLK3-203ENST00000454830 COPS5Q92905 334 aa14.8□□□□□ -0.04
CLK3-203ENST00000454830 ANKZF1Q9H8Y5 726 aa14.8□□□□□ -0.04
CLK3-203ENST00000454830 RBPJLQ9UBG7 517 aa14.8□□□□□ -0.04
CLK3-203ENST00000454830 KIAA1217Q5T5P2 1943 aa14.79□□□□□ -0.04
CLK3-203ENST00000454830 TMEM110-MUSTN1A8MSY1 372 aa14.79□□□□□ -0.04
CLK3-203ENST00000454830 SLC25A27O95847 323 aa14.79□□□□□ -0.04
CLK3-203ENST00000454830 POTEJP0CG39 1038 aa14.79□□□□□ -0.04
CLK3-203ENST00000454830 VSNL1P62760 191 aa14.79□□□□□ -0.04
CLK3-203ENST00000454830 PPIL2Q13356 520 aa14.79□□□□□ -0.04
CLK3-203ENST00000454830 IFI16Q16666 785 aaKnown RBP14.79□□□□□ -0.04
CLK3-203ENST00000454830 DAAM2Q86T65 1068 aa14.79□□□□□ -0.04
CLK3-203ENST00000454830 LRRC71Q8N4P6 559 aa14.79□□□□□ -0.04
CLK3-203ENST00000454830 SPATA33Q96N06 139 aa14.79□□□□□ -0.04
CLK3-203ENST00000454830 PPP1R16BQ96T49 567 aa14.79□□□□□ -0.04
CLK3-203ENST00000454830 PI4K2AQ9BTU6 479 aa14.79□□□□□ -0.04
CLK3-203ENST00000454830 DDX3XO00571 662 aaKnown RBP eCLIP14.79□□□□□ -0.04
CLK3-203ENST00000454830 KCNK3O14649 394 aa14.79□□□□□ -0.04
CLK3-203ENST00000454830 PJA2O43164 708 aa14.79□□□□□ -0.04
CLK3-203ENST00000454830 SNAPC2Q13487 334 aa14.79□□□□□ -0.04
CLK3-203ENST00000454830 ZBTB33Q86T24 672 aa14.79□□□□□ -0.04
CLK3-203ENST00000454830 GPD1LQ8N335 351 aa14.79□□□□□ -0.04
CLK3-203ENST00000454830 PLEKHO2Q8TD55 490 aa14.79□□□□□ -0.04
CLK3-203ENST00000454830 TARS2Q9BW92 718 aaKnown RBP14.79□□□□□ -0.04
CLK3-203ENST00000454830 DOCK5Q9H7D0 1870 aa14.79□□□□□ -0.04
CLK3-203ENST00000454830 SYNGAP1Q96PV0 1343 aa14.79□□□□□ -0.04
CLK3-203ENST00000454830 ZNF233A6NK53 670 aa14.79□□□□□ -0.04
CLK3-203ENST00000454830 POLR3GO15318 223 aaPredicted RBP14.79□□□□□ -0.04
CLK3-203ENST00000454830 FARP2O94887 1054 aaPredicted RBP14.79□□□□□ -0.04
CLK3-203ENST00000454830 TXNP10599 105 aaKnown RBP14.79□□□□□ -0.04
CLK3-203ENST00000454830 PRPF4BQ13523 1007 aaKnown RBP14.79□□□□□ -0.04
CLK3-203ENST00000454830 MYBPC2Q14324 1141 aa14.79□□□□□ -0.04
CLK3-203ENST00000454830 RPS6KA1Q15418 735 aa14.79□□□□□ -0.04
CLK3-203ENST00000454830 LONRF2Q1L5Z9 754 aa14.79□□□□□ -0.04
CLK3-203ENST00000454830 KRT39Q6A163 491 aa14.79□□□□□ -0.04
CLK3-203ENST00000454830 ASAP3Q8TDY4 903 aa14.79□□□□□ -0.04
CLK3-203ENST00000454830 ZBTB45Q96K62 511 aaPredicted RBP14.79□□□□□ -0.04
CLK3-203ENST00000454830 ACP6Q9NPH0 428 aa14.79□□□□□ -0.04
CLK3-203ENST00000454830 IVNS1ABPQ9Y6Y0 642 aa14.79□□□□□ -0.04
CLK3-203ENST00000454830 PHACTR2O75167 634 aa14.78□□□□□ -0.04
CLK3-203ENST00000454830 GALCP54803 685 aa14.78□□□□□ -0.04
CLK3-203ENST00000454830 PEX26Q7Z412 305 aa14.78□□□□□ -0.04
CLK3-203ENST00000454830 SPIRE2Q8WWL2 714 aa14.78□□□□□ -0.04
CLK3-203ENST00000454830 TAF1DQ9H5J8 278 aaPredicted RBP14.78□□□□□ -0.04
CLK3-203ENST00000454830 ABCB6Q9NP58 842 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms