RNA–Protein interactions for RNA: ENST00000454612.6

DDR1-240, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene DDR1, Length 3,942 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-240ENST00000454612 CBWD3Q5JTY5 395 aa12.02□□□□□ -0.48
DDR1-240ENST00000454612 CBWD5Q5RIA9 395 aa12.02□□□□□ -0.48
DDR1-240ENST00000454612 NAIF1Q69YI7 327 aaPredicted RBP12.02□□□□□ -0.48
DDR1-240ENST00000454612 CBWD2Q8IUF1 395 aa12.02□□□□□ -0.48
DDR1-240ENST00000454612 TRIM59Q8IWR1 403 aa12.02□□□□□ -0.48
DDR1-240ENST00000454612 ATG4AQ8WYN0 398 aa12.02□□□□□ -0.48
DDR1-240ENST00000454612 KCNH7Q9NS40 1196 aa12.02□□□□□ -0.48
DDR1-240ENST00000454612 PCDHB4Q9Y5E5 795 aa12.02□□□□□ -0.48
DDR1-240ENST00000454612 CSDE1O75534 798 aaKnown RBP12.02□□□□□ -0.49
DDR1-240ENST00000454612 EYA4O95677 639 aa12.02□□□□□ -0.49
DDR1-240ENST00000454612 SYF2O95926 243 aaKnown RBP12.02□□□□□ -0.49
DDR1-240ENST00000454612 PDE6CP51160 858 aa12.02□□□□□ -0.49
DDR1-240ENST00000454612 VAMP7P51809 220 aa12.02□□□□□ -0.49
DDR1-240ENST00000454612 HMGCS2P54868 508 aa12.02□□□□□ -0.49
DDR1-240ENST00000454612 MTMR2Q13614 643 aa12.02□□□□□ -0.49
DDR1-240ENST00000454612 LLGL2Q6P1M3 1020 aa12.02□□□□□ -0.49
DDR1-240ENST00000454612 EMBQ6PCB8 327 aa12.02□□□□□ -0.49
DDR1-240ENST00000454612 RUFY4Q6ZNE9 571 aa12.02□□□□□ -0.49
DDR1-240ENST00000454612 NCAPG2Q86XI2 1143 aa12.02□□□□□ -0.49
DDR1-240ENST00000454612 THNSL1Q8IYQ7 743 aa12.02□□□□□ -0.49
DDR1-240ENST00000454612 KIRREL3Q8IZU9 778 aa12.02□□□□□ -0.49
DDR1-240ENST00000454612 TTLL6Q8N841 843 aa12.02□□□□□ -0.49
DDR1-240ENST00000454612 ZSWIM2Q8NEG5 633 aa12.02□□□□□ -0.49
DDR1-240ENST00000454612 TCP11Q8WWU5 503 aa12.02□□□□□ -0.49
DDR1-240ENST00000454612 BAP1Q92560 729 aa12.02□□□□□ -0.49
DDR1-240ENST00000454612 FAM20AQ96MK3 541 aa12.02□□□□□ -0.49
DDR1-240ENST00000454612 VPS37BQ9H9H4 285 aa12.02□□□□□ -0.49
DDR1-240ENST00000454612 DONSONQ9NYP3 566 aa12.02□□□□□ -0.49
DDR1-240ENST00000454612 MAGED2Q9UNF1 606 aaPredicted RBP12.02□□□□□ -0.49
DDR1-240ENST00000454612 ZNF148Q9UQR1 794 aa12.02□□□□□ -0.49
DDR1-240ENST00000454612 MYO1FO00160 1098 aa12.02□□□□□ -0.49
DDR1-240ENST00000454612 MAP2K7O14733 419 aa12.02□□□□□ -0.49
DDR1-240ENST00000454612 PIAS1O75925 651 aa12.02□□□□□ -0.49
DDR1-240ENST00000454612 LMNB1P20700 586 aa12.02□□□□□ -0.49
DDR1-240ENST00000454612 JAG1P78504 1218 aa12.02□□□□□ -0.49
DDR1-240ENST00000454612 AP3B2Q13367 1082 aa12.02□□□□□ -0.49
DDR1-240ENST00000454612 BAATQ14032 418 aaPredicted RBP12.02□□□□□ -0.49
DDR1-240ENST00000454612 SGO2Q562F6 1265 aa12.02□□□□□ -0.49
DDR1-240ENST00000454612 BSPRYQ5W0U4 402 aa12.02□□□□□ -0.49
DDR1-240ENST00000454612 DEPTORQ8TB45 409 aa12.02□□□□□ -0.49
DDR1-240ENST00000454612 ZKSCAN4Q969J2 545 aaPredicted RBP12.02□□□□□ -0.49
DDR1-240ENST00000454612 ELAC2Q9BQ52 826 aaKnown RBP12.02□□□□□ -0.49
DDR1-240ENST00000454612 RAB21Q9UL25 225 aa12.02□□□□□ -0.49
DDR1-240ENST00000454612 PNMA2Q9UL42 364 aa12.02□□□□□ -0.49
DDR1-240ENST00000454612 AGTPBP1Q9UPW5 1226 aa12.02□□□□□ -0.49
DDR1-240ENST00000454612 hCG_1984214I3L0E3 225 aa12.01□□□□□ -0.49
DDR1-240ENST00000454612 CLDN3O15551 220 aa12.01□□□□□ -0.49
DDR1-240ENST00000454612 GJB6O95452 261 aa12.01□□□□□ -0.49
DDR1-240ENST00000454612 KRT15P19012 456 aa12.01□□□□□ -0.49
DDR1-240ENST00000454612 SOX5P35711 763 aa12.01□□□□□ -0.49
DDR1-240ENST00000454612 TFAMQ00059 246 aaKnown RBP12.01□□□□□ -0.49
DDR1-240ENST00000454612 FAM47EQ6ZV65 393 aa12.01□□□□□ -0.49
DDR1-240ENST00000454612 HOOK3Q86VS8 718 aa12.01□□□□□ -0.49
DDR1-240ENST00000454612 ZNF713Q8N859 430 aaPredicted RBP12.01□□□□□ -0.49
DDR1-240ENST00000454612 SYT2Q8N9I0 419 aaPredicted RBP12.01□□□□□ -0.49
DDR1-240ENST00000454612 NT5C1BQ96P26 610 aa12.01□□□□□ -0.49
DDR1-240ENST00000454612 CNOT8Q9UFF9 292 aaKnown RBP12.01□□□□□ -0.49
DDR1-240ENST00000454612 PPP1R9AQ9ULJ8 1098 aa12.01□□□□□ -0.49
DDR1-240ENST00000454612 DPEP1P16444 411 aa12.01□□□□□ -0.49
DDR1-240ENST00000454612 MEA1Q16626 185 aa12.01□□□□□ -0.49
DDR1-240ENST00000454612 RNF207Q6ZRF8 634 aa12.01□□□□□ -0.49
DDR1-240ENST00000454612 PALB2Q86YC2 1186 aa12.01□□□□□ -0.49
DDR1-240ENST00000454612 XXYLT1Q8NBI6 393 aa12.01□□□□□ -0.49
DDR1-240ENST00000454612 PPP1R13LQ8WUF5 828 aa12.01□□□□□ -0.49
DDR1-240ENST00000454612 ARHGEF26Q96DR7 871 aa12.01□□□□□ -0.49
DDR1-240ENST00000454612 TAF1DQ9H5J8 278 aaPredicted RBP12.01□□□□□ -0.49
DDR1-240ENST00000454612 AZI2Q9H6S1 392 aa12.01□□□□□ -0.49
DDR1-240ENST00000454612 DNAJC18Q9H819 358 aa12.01□□□□□ -0.49
DDR1-240ENST00000454612 SGPL1O95470 568 aa12.01□□□□□ -0.49
DDR1-240ENST00000454612 ORC1Q13415 861 aa12.01□□□□□ -0.49
DDR1-240ENST00000454612 USP38Q8NB14 1042 aa12.01□□□□□ -0.49
DDR1-240ENST00000454612 ACCSQ96QU6 501 aa12.01□□□□□ -0.49
DDR1-240ENST00000454612 NUP85Q9BW27 656 aa12.01□□□□□ -0.49
DDR1-240ENST00000454612 PRM3Q9NNZ6 103 aa12.01□□□□□ -0.49
DDR1-240ENST00000454612 SAMD15Q9P1V8 674 aa12.01□□□□□ -0.49
DDR1-240ENST00000454612 ALG6Q9Y672 507 aa12.01□□□□□ -0.49
DDR1-240ENST00000454612 ENO4A6NNW6 628 aa12□□□□□ -0.49
DDR1-240ENST00000454612 PDXKO00764 312 aa12□□□□□ -0.49
DDR1-240ENST00000454612 THAP12O43422 761 aa12□□□□□ -0.49
DDR1-240ENST00000454612 SLITRK3O94933 977 aa12□□□□□ -0.49
DDR1-240ENST00000454612 HOXA10P31260 410 aaPredicted RBP12□□□□□ -0.49
DDR1-240ENST00000454612 PIK3CAP42336 1068 aa12□□□□□ -0.49
DDR1-240ENST00000454612 PPP2R5DQ14738 602 aa12□□□□□ -0.49
DDR1-240ENST00000454612 C10orf76Q5T2E6 689 aa12□□□□□ -0.49
DDR1-240ENST00000454612 STRIP1Q5VSL9 837 aa12□□□□□ -0.49
DDR1-240ENST00000454612 SNRNP48Q6IEG0 339 aaKnown RBP12□□□□□ -0.49
DDR1-240ENST00000454612 TMEM270Q6UE05 265 aa12□□□□□ -0.49
DDR1-240ENST00000454612 KIFAP3Q92845 792 aa12□□□□□ -0.49
DDR1-240ENST00000454612 C18orf8Q96DM3 657 aa12□□□□□ -0.49
DDR1-240ENST00000454612 BUD13Q9BRD0 619 aaKnown RBP eCLIP12□□□□□ -0.493e-6■■■□□ 17.9
DDR1-240ENST00000454612 PPP1R12CQ9BZL4 782 aa12□□□□□ -0.49
DDR1-240ENST00000454612 C1orf112Q9NSG2 853 aa12□□□□□ -0.49
DDR1-240ENST00000454612 NYAP2Q9P242 653 aa12□□□□□ -0.49
DDR1-240ENST00000454612 BZW2Q9Y6E2 419 aaKnown RBP12□□□□□ -0.49
DDR1-240ENST00000454612 MYO3BQ8WXR4 1341 aa12□□□□□ -0.49
DDR1-240ENST00000454612 SYNJ2BP-COX16A0A087WUM0 186 aa12□□□□□ -0.49
DDR1-240ENST00000454612 SSU72P8A0A1W2PR75 194 aa12□□□□□ -0.49
DDR1-240ENST00000454612 ESYT2A0FGR8 921 aa12□□□□□ -0.49
DDR1-240ENST00000454612 FOXO6A8MYZ6 492 aa12□□□□□ -0.49
DDR1-240ENST00000454612 M0R2N6 131 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms