RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 EPC2Q52LR7 807 aa15.65■□□□□ 0.1
HDAC4-205ENST00000454542 TAS1R3Q7RTX0 852 aa15.65■□□□□ 0.1
HDAC4-205ENST00000454542 GPBP1Q86WP2 473 aa15.65■□□□□ 0.1
HDAC4-205ENST00000454542 TMEM192Q8IY95 271 aa15.65■□□□□ 0.1
HDAC4-205ENST00000454542 DEPTORQ8TB45 409 aa15.65■□□□□ 0.1
HDAC4-205ENST00000454542 GDPD5Q8WTR4 605 aa15.65■□□□□ 0.1
HDAC4-205ENST00000454542 SPIRE2Q8WWL2 714 aa15.65■□□□□ 0.1
HDAC4-205ENST00000454542 CASD1Q96PB1 797 aa15.65■□□□□ 0.1
HDAC4-205ENST00000454542 GAS2L1Q99501 681 aaPredicted RBP15.65■□□□□ 0.1
HDAC4-205ENST00000454542 REEP2Q9BRK0 252 aa15.65■□□□□ 0.1
HDAC4-205ENST00000454542 CERS4Q9HA82 394 aa15.65■□□□□ 0.1
HDAC4-205ENST00000454542 CCDC39Q9UFE4 941 aa15.65■□□□□ 0.1
HDAC4-205ENST00000454542 RCOR1Q9UKL0 485 aa15.65■□□□□ 0.1
HDAC4-205ENST00000454542 CFAP45Q9UL16 551 aa15.65■□□□□ 0.1
HDAC4-205ENST00000454542 PCDHB2Q9Y5E7 798 aa15.65■□□□□ 0.1
HDAC4-205ENST00000454542 SPTBN5Q9NRC6 3674 aaKnown RBP15.65■□□□□ 0.1
HDAC4-205ENST00000454542 A0A1B0GUA9 196 aa15.64■□□□□ 0.09
HDAC4-205ENST00000454542 TTLL13PA6NNM8 815 aa15.64■□□□□ 0.09
HDAC4-205ENST00000454542 MEIS3P2A8K0S8 358 aa15.64■□□□□ 0.09
HDAC4-205ENST00000454542 ACKR2O00590 384 aa15.64■□□□□ 0.09
HDAC4-205ENST00000454542 INPPL1O15357 1258 aa15.64■□□□□ 0.09
HDAC4-205ENST00000454542 SSBP05455 408 aaKnown RBP eCLIP15.64■□□□□ 0.09
HDAC4-205ENST00000454542 PRKCBP05771 671 aa15.64■□□□□ 0.09
HDAC4-205ENST00000454542 PLS3P13797 630 aa15.64■□□□□ 0.09
HDAC4-205ENST00000454542 NCLP19338 710 aaKnown RBP15.64■□□□□ 0.09
HDAC4-205ENST00000454542 EFNA5P52803 228 aa15.64■□□□□ 0.09
HDAC4-205ENST00000454542 PEX3P56589 373 aa15.64■□□□□ 0.09
HDAC4-205ENST00000454542 E2F4Q16254 413 aa15.64■□□□□ 0.09
HDAC4-205ENST00000454542 MAPK6Q16659 721 aa15.64■□□□□ 0.09
HDAC4-205ENST00000454542 PAN2Q504Q3 1202 aaKnown RBP15.64■□□□□ 0.09
HDAC4-205ENST00000454542 SHC4Q6S5L8 630 aa15.64■□□□□ 0.09
HDAC4-205ENST00000454542 CCDC73Q6ZRK6 1079 aa15.64■□□□□ 0.09
HDAC4-205ENST00000454542 LRRC43Q8N309 656 aa15.64■□□□□ 0.09
HDAC4-205ENST00000454542 SMG8Q8ND04 991 aaKnown RBP15.64■□□□□ 0.09
HDAC4-205ENST00000454542 FBXO22Q8NEZ5 403 aa15.64■□□□□ 0.09
HDAC4-205ENST00000454542 RASSF8Q8NHQ8 419 aa15.64■□□□□ 0.09
HDAC4-205ENST00000454542 CPB2Q96IY4 423 aa15.64■□□□□ 0.09
HDAC4-205ENST00000454542 NTPCRQ9BSD7 190 aaKnown RBP15.64■□□□□ 0.09
HDAC4-205ENST00000454542 PLVAPQ9BX97 442 aa15.64■□□□□ 0.09
HDAC4-205ENST00000454542 EIF2AQ9BY44 585 aaKnown RBP15.64■□□□□ 0.09
HDAC4-205ENST00000454542 TMEM134Q9H6X4 195 aa15.64■□□□□ 0.09
HDAC4-205ENST00000454542 CWH43Q9H720 699 aa15.64■□□□□ 0.09
HDAC4-205ENST00000454542 POLD4Q9HCU8 107 aa15.64■□□□□ 0.09
HDAC4-205ENST00000454542 DAXXQ9UER7 740 aaPredicted RBP15.64■□□□□ 0.09
HDAC4-205ENST00000454542 PLXNA4Q9HCM2 1894 aa15.63■□□□□ 0.09
HDAC4-205ENST00000454542 TCHHQ07283 1943 aa15.63■□□□□ 0.09
HDAC4-205ENST00000454542 NPHP3-ACAD11A0A0J9YXS1 232 aa15.63■□□□□ 0.09
HDAC4-205ENST00000454542 TBKBP1A7MCY6 615 aa15.63■□□□□ 0.09
HDAC4-205ENST00000454542 H3BNC9 293 aa15.63■□□□□ 0.09
HDAC4-205ENST00000454542 RFXAPO00287 272 aa15.63■□□□□ 0.09
HDAC4-205ENST00000454542 RB1P06400 928 aa15.63■□□□□ 0.09
HDAC4-205ENST00000454542 CTNNB1P35222 781 aa15.63■□□□□ 0.09
HDAC4-205ENST00000454542 BMPR1AP36894 532 aa15.63■□□□□ 0.09
HDAC4-205ENST00000454542 NCKAP1LP55160 1127 aa15.63■□□□□ 0.09
HDAC4-205ENST00000454542 FOXD4L6Q3SYB3 417 aaPredicted RBP15.63■□□□□ 0.09
HDAC4-205ENST00000454542 SLC27A1Q6PCB7 646 aa15.63■□□□□ 0.09
HDAC4-205ENST00000454542 FOXD4L3Q6VB84 417 aaPredicted RBP15.63■□□□□ 0.09
HDAC4-205ENST00000454542 AGMOQ6ZNB7 445 aa15.63■□□□□ 0.09
HDAC4-205ENST00000454542 CNNM3Q8NE01 707 aa15.63■□□□□ 0.09
HDAC4-205ENST00000454542 P2RX5Q93086 422 aa15.63■□□□□ 0.09
HDAC4-205ENST00000454542 FIZ1Q96SL8 496 aa15.63■□□□□ 0.09
HDAC4-205ENST00000454542 PDZD7Q9H5P4 517 aa15.63■□□□□ 0.09
HDAC4-205ENST00000454542 HCSTQ9UBK5 93 aa15.63■□□□□ 0.09
HDAC4-205ENST00000454542 MTUS1Q9ULD2 1270 aa15.63■□□□□ 0.09
HDAC4-205ENST00000454542 PCDHA7Q9UN72 937 aa15.63■□□□□ 0.09
HDAC4-205ENST00000454542 IPPQ9Y573 584 aa15.63■□□□□ 0.09
HDAC4-205ENST00000454542 MTCH2Q9Y6C9 303 aa15.63■□□□□ 0.09
HDAC4-205ENST00000454542 N4BP3O15049 544 aa15.62■□□□□ 0.09
HDAC4-205ENST00000454542 KRT85P78386 507 aa15.62■□□□□ 0.09
HDAC4-205ENST00000454542 CACNB1Q02641 598 aaPredicted RBP15.62■□□□□ 0.09
HDAC4-205ENST00000454542 RAD51AP2Q09MP3 1159 aa15.62■□□□□ 0.09
HDAC4-205ENST00000454542 GIT2Q14161 759 aa15.62■□□□□ 0.09
HDAC4-205ENST00000454542 RRAGBQ5VZM2 374 aa15.62■□□□□ 0.09
HDAC4-205ENST00000454542 RESP18Q5W5W9 173 aa15.62■□□□□ 0.09
HDAC4-205ENST00000454542 LRRC55Q6ZSA7 311 aa15.62■□□□□ 0.09
HDAC4-205ENST00000454542 TMEM161BQ8NDZ6 487 aa15.62■□□□□ 0.09
HDAC4-205ENST00000454542 HELQQ8TDG4 1101 aa15.62■□□□□ 0.09
HDAC4-205ENST00000454542 LEO1Q8WVC0 666 aaPredicted RBP15.62■□□□□ 0.09
HDAC4-205ENST00000454542 LPPQ93052 612 aa15.62■□□□□ 0.09
HDAC4-205ENST00000454542 PGBD4Q96DM1 585 aa15.62■□□□□ 0.09
HDAC4-205ENST00000454542 CHAMP1Q96JM3 812 aa15.62■□□□□ 0.09
HDAC4-205ENST00000454542 MRPL9Q9BYD2 267 aaKnown RBP15.62■□□□□ 0.09
HDAC4-205ENST00000454542 KMT5AQ9NQR1 393 aa15.62■□□□□ 0.09
HDAC4-205ENST00000454542 LMCD1Q9NZU5 365 aa15.62■□□□□ 0.09
HDAC4-205ENST00000454542 RBM19Q9Y4C8 960 aaKnown RBP15.62■□□□□ 0.09
HDAC4-205ENST00000454542 ATP6V1DQ9Y5K8 247 aa15.62■□□□□ 0.09
HDAC4-205ENST00000454542 MYO9BQ13459 2157 aa15.62■□□□□ 0.09
HDAC4-205ENST00000454542 REV3LO60673 3130 aa15.61■□□□□ 0.09
HDAC4-205ENST00000454542 FRMD3A2A2Y4 597 aa15.61■□□□□ 0.09
HDAC4-205ENST00000454542 ABLIM1O14639 778 aa15.61■□□□□ 0.09
HDAC4-205ENST00000454542 OFD1O75665 1012 aa15.61■□□□□ 0.09
HDAC4-205ENST00000454542 MAPTP10636 758 aaKnown RBP15.61■□□□□ 0.09
HDAC4-205ENST00000454542 IBSPP21815 317 aaPredicted RBP15.61■□□□□ 0.09
HDAC4-205ENST00000454542 STAT6P42226 847 aa15.61■□□□□ 0.09
HDAC4-205ENST00000454542 NCBP1Q09161 790 aaKnown RBP15.61■□□□□ 0.09
HDAC4-205ENST00000454542 PRPF4BQ13523 1007 aaKnown RBP15.61■□□□□ 0.09
HDAC4-205ENST00000454542 NT5DC1Q5TFE4 455 aa15.61■□□□□ 0.09
HDAC4-205ENST00000454542 MAFAQ8NHW3 353 aaPredicted RBP15.61■□□□□ 0.09
HDAC4-205ENST00000454542 DNAJC19Q96DA6 116 aa15.61■□□□□ 0.09
HDAC4-205ENST00000454542 C11orf84Q9BUA3 381 aaPredicted RBP15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms