RNA–Protein interactions for RNA: ENST00000453441.1

COL28A1-205, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 2

Gene COL28A1, Length 700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-205ENST00000453441 KCNK18Q7Z418 384 aa9.64□□□□□ -0.87
COL28A1-205ENST00000453441 SRGAP1Q7Z6B7 1085 aa9.64□□□□□ -0.87
COL28A1-205ENST00000453441 CEP57L1Q8IYX8 460 aa9.64□□□□□ -0.87
COL28A1-205ENST00000453441 PRPF31Q8WWY3 499 aaKnown RBP9.64□□□□□ -0.87
COL28A1-205ENST00000453441 SEPT8Q92599 483 aa9.64□□□□□ -0.87
COL28A1-205ENST00000453441 BADQ92934 168 aa9.64□□□□□ -0.87
COL28A1-205ENST00000453441 WNT8BQ93098 351 aa9.64□□□□□ -0.87
COL28A1-205ENST00000453441 IFT74Q96LB3 600 aa9.64□□□□□ -0.87
COL28A1-205ENST00000453441 SCLT1Q96NL6 688 aa9.64□□□□□ -0.87
COL28A1-205ENST00000453441 GDF15Q99988 308 aa9.64□□□□□ -0.87
COL28A1-205ENST00000453441 FTHL17Q9BXU8 183 aa9.64□□□□□ -0.87
COL28A1-205ENST00000453441 BLOC1S4Q9NUP1 217 aa9.64□□□□□ -0.87
COL28A1-205ENST00000453441 HPSEQ9Y251 543 aa9.64□□□□□ -0.87
COL28A1-205ENST00000453441 UMODL1Q5DID0 1318 aa9.63□□□□□ -0.87
COL28A1-205ENST00000453441 ABHD14A-ACY1A0A1B0GW23 586 aa9.63□□□□□ -0.87
COL28A1-205ENST00000453441 GOLGA6L22H0YM25 854 aa9.63□□□□□ -0.87
COL28A1-205ENST00000453441 GPR182O15218 404 aa9.63□□□□□ -0.87
COL28A1-205ENST00000453441 TBCAO75347 108 aaKnown RBP9.63□□□□□ -0.87
COL28A1-205ENST00000453441 GPR32O75388 356 aa9.63□□□□□ -0.87
COL28A1-205ENST00000453441 VTNP04004 478 aa9.63□□□□□ -0.87
COL28A1-205ENST00000453441 KRT18P05783 430 aaKnown RBP9.63□□□□□ -0.87
COL28A1-205ENST00000453441 CTSHP09668 335 aa9.63□□□□□ -0.87
COL28A1-205ENST00000453441 CSF2RAP15509 400 aa9.63□□□□□ -0.87
COL28A1-205ENST00000453441 PFKFB1P16118 471 aa9.63□□□□□ -0.87
COL28A1-205ENST00000453441 SYN1P17600 705 aa9.63□□□□□ -0.87
COL28A1-205ENST00000453441 GAP43P17677 238 aa9.63□□□□□ -0.87
COL28A1-205ENST00000453441 SFPQP23246 707 aaKnown RBP eCLIP9.63□□□□□ -0.87
COL28A1-205ENST00000453441 MAGEA10P43363 369 aaPredicted RBP9.63□□□□□ -0.87
COL28A1-205ENST00000453441 NAMPTP43490 491 aa9.63□□□□□ -0.87
COL28A1-205ENST00000453441 EFNA5P52803 228 aa9.63□□□□□ -0.87
COL28A1-205ENST00000453441 CCL23P55773 120 aa9.63□□□□□ -0.87
COL28A1-205ENST00000453441 NLRP11P59045 1033 aaKnown RBP9.63□□□□□ -0.87
COL28A1-205ENST00000453441 LAMTOR4Q0VGL1 99 aa9.63□□□□□ -0.87
COL28A1-205ENST00000453441 PAK2Q13177 524 aa9.63□□□□□ -0.87
COL28A1-205ENST00000453441 DMP1Q13316 513 aaPredicted RBP9.63□□□□□ -0.87
COL28A1-205ENST00000453441 NAALADL2Q58DX5 795 aa9.63□□□□□ -0.87
COL28A1-205ENST00000453441 PLEKHG4Q58EX7 1191 aa9.63□□□□□ -0.87
COL28A1-205ENST00000453441 FBXO47Q5MNV8 452 aa9.63□□□□□ -0.87
COL28A1-205ENST00000453441 FAM102BQ5T8I3 360 aa9.63□□□□□ -0.87
COL28A1-205ENST00000453441 CNNM4Q6P4Q7 775 aa9.63□□□□□ -0.87
COL28A1-205ENST00000453441 GPBP1Q86WP2 473 aa9.63□□□□□ -0.87
COL28A1-205ENST00000453441 RHPN2Q8IUC4 686 aa9.63□□□□□ -0.87
COL28A1-205ENST00000453441 ZBTB8OSQ8IWT0 167 aa9.63□□□□□ -0.87
COL28A1-205ENST00000453441 FSIP1Q8NA03 581 aa9.63□□□□□ -0.87
COL28A1-205ENST00000453441 KCNN1Q92952 543 aa9.63□□□□□ -0.87
COL28A1-205ENST00000453441 TMEM143Q96AN5 459 aa9.63□□□□□ -0.87
COL28A1-205ENST00000453441 PLIN2Q99541 437 aa9.63□□□□□ -0.87
COL28A1-205ENST00000453441 SH2D3AQ9BRG2 576 aa9.63□□□□□ -0.87
COL28A1-205ENST00000453441 POLR3FQ9H1D9 316 aaPredicted RBP9.63□□□□□ -0.87
COL28A1-205ENST00000453441 ADAMTS10Q9H324 1103 aa9.63□□□□□ -0.87
COL28A1-205ENST00000453441 LARSQ9P2J5 1176 aaKnown RBP9.63□□□□□ -0.87
COL28A1-205ENST00000453441 SEL1LQ9UBV2 794 aa9.63□□□□□ -0.87
COL28A1-205ENST00000453441 MYH11P35749 1972 aa9.63□□□□□ -0.87
COL28A1-205ENST00000453441 POLR2DO15514 142 aaKnown RBP9.62□□□□□ -0.87
COL28A1-205ENST00000453441 RPS6KA5O75582 802 aa9.62□□□□□ -0.87
COL28A1-205ENST00000453441 FGBP02675 491 aa9.62□□□□□ -0.87
COL28A1-205ENST00000453441 SLFN14P0C7P3 912 aa9.62□□□□□ -0.87
COL28A1-205ENST00000453441 CCNYL3P0C7X3 344 aa9.62□□□□□ -0.87
COL28A1-205ENST00000453441 MAPTP10636 758 aaKnown RBP9.62□□□□□ -0.87
COL28A1-205ENST00000453441 DARSP14868 501 aaKnown RBP9.62□□□□□ -0.87
COL28A1-205ENST00000453441 ITGB8P26012 769 aa9.62□□□□□ -0.87
COL28A1-205ENST00000453441 SYKP43405 635 aa9.62□□□□□ -0.87
COL28A1-205ENST00000453441 SMTNP53814 917 aa9.62□□□□□ -0.87
COL28A1-205ENST00000453441 PTENP60484 403 aa9.62□□□□□ -0.87
COL28A1-205ENST00000453441 NCBP1Q09161 790 aaKnown RBP9.62□□□□□ -0.87
COL28A1-205ENST00000453441 DRP2Q13474 957 aa9.62□□□□□ -0.87
COL28A1-205ENST00000453441 IKBKEQ14164 716 aa9.62□□□□□ -0.87
COL28A1-205ENST00000453441 MCM6Q14566 821 aa9.62□□□□□ -0.87
COL28A1-205ENST00000453441 LPIN1Q14693 890 aa9.62□□□□□ -0.87
COL28A1-205ENST00000453441 MBTPS1Q14703 1052 aa9.62□□□□□ -0.87
COL28A1-205ENST00000453441 KIZQ2M2Z5 673 aa9.62□□□□□ -0.87
COL28A1-205ENST00000453441 CDCA2Q69YH5 1023 aaPredicted RBP9.62□□□□□ -0.87
COL28A1-205ENST00000453441 PDILTQ8N807 584 aa9.62□□□□□ -0.87
COL28A1-205ENST00000453441 DEPTORQ8TB45 409 aa9.62□□□□□ -0.87
COL28A1-205ENST00000453441 DHX58Q96C10 678 aa9.62□□□□□ -0.87
COL28A1-205ENST00000453441 ZBTB10Q96DT7 871 aa9.62□□□□□ -0.87
COL28A1-205ENST00000453441 CCDC51Q96ER9 411 aa9.62□□□□□ -0.87
COL28A1-205ENST00000453441 SCLYQ96I15 445 aa9.62□□□□□ -0.87
COL28A1-205ENST00000453441 PRIMPOLQ96LW4 560 aa9.62□□□□□ -0.87
COL28A1-205ENST00000453441 NLRP4Q96MN2 994 aa9.62□□□□□ -0.87
COL28A1-205ENST00000453441 NTPCRQ9BSD7 190 aaKnown RBP9.62□□□□□ -0.87
COL28A1-205ENST00000453441 RUSC1Q9BVN2 902 aa9.62□□□□□ -0.87
COL28A1-205ENST00000453441 IFIH1Q9BYX4 1025 aaKnown RBP9.62□□□□□ -0.87
COL28A1-205ENST00000453441 UBE2OQ9C0C9 1292 aaKnown RBP9.62□□□□□ -0.87
COL28A1-205ENST00000453441 PARVGQ9HBI0 331 aa9.62□□□□□ -0.87
COL28A1-205ENST00000453441 GDPD2Q9HCC8 539 aa9.62□□□□□ -0.87
COL28A1-205ENST00000453441 CHST12Q9NRB3 414 aa9.62□□□□□ -0.87
COL28A1-205ENST00000453441 EVA1BQ9NVM1 165 aa9.62□□□□□ -0.87
COL28A1-205ENST00000453441 KBTBD4Q9NVX7 518 aa9.62□□□□□ -0.87
COL28A1-205ENST00000453441 HOOK1Q9UJC3 728 aaKnown RBP9.62□□□□□ -0.87
COL28A1-205ENST00000453441 SIP14410 1827 aa9.61□□□□□ -0.87
COL28A1-205ENST00000453441 A0A087WZ62 844 aa9.61□□□□□ -0.87
COL28A1-205ENST00000453441 A0A087X0B3 334 aa9.61□□□□□ -0.87
COL28A1-205ENST00000453441 A0A1B0GVL5 298 aa9.61□□□□□ -0.87
COL28A1-205ENST00000453441 CFAP99D6REC4 459 aa9.61□□□□□ -0.87
COL28A1-205ENST00000453441 GDF9O60383 454 aa9.61□□□□□ -0.87
COL28A1-205ENST00000453441 NBNO60934 754 aa9.61□□□□□ -0.87
COL28A1-205ENST00000453441 HIP1RO75146 1068 aa9.61□□□□□ -0.87
COL28A1-205ENST00000453441 FAM13AO94988 1023 aa9.61□□□□□ -0.87
COL28A1-205ENST00000453441 SRGAP2CP0DJJ0 459 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms