RNA–Protein interactions for RNA: ENST00000452979.5

HERC3-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 3

Gene HERC3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-207ENST00000452979 TDP2O95551 362 aa13.07□□□□□ -0.32
HERC3-207ENST00000452979 EFEMP2O95967 443 aa13.07□□□□□ -0.32
HERC3-207ENST00000452979 KLRC2P26717 231 aa13.07□□□□□ -0.32
HERC3-207ENST00000452979 HOXA11P31270 313 aaPredicted RBP13.07□□□□□ -0.32
HERC3-207ENST00000452979 AFF1P51825 1210 aaKnown RBP13.07□□□□□ -0.32
HERC3-207ENST00000452979 UBXN11Q5T124 520 aa13.07□□□□□ -0.32
HERC3-207ENST00000452979 CYP26C1Q6V0L0 522 aa13.07□□□□□ -0.32
HERC3-207ENST00000452979 CCDC149Q6ZUS6 474 aa13.07□□□□□ -0.32
HERC3-207ENST00000452979 DAGLBQ8NCG7 672 aa13.07□□□□□ -0.32
HERC3-207ENST00000452979 URGCPQ8TCY9 931 aa13.07□□□□□ -0.32
HERC3-207ENST00000452979 NKD2Q969F2 451 aaPredicted RBP13.07□□□□□ -0.32
HERC3-207ENST00000452979 NLRP4Q96MN2 994 aa13.07□□□□□ -0.32
HERC3-207ENST00000452979 MRPL17Q9NRX2 175 aaKnown RBP13.07□□□□□ -0.32
HERC3-207ENST00000452979 IGSF9Q9P2J2 1179 aa13.07□□□□□ -0.32
HERC3-207ENST00000452979 DUSP12Q9UNI6 340 aa13.07□□□□□ -0.32
HERC3-207ENST00000452979 FAN1Q9Y2M0 1017 aa13.07□□□□□ -0.32
HERC3-207ENST00000452979 PPME1Q9Y570 386 aa13.07□□□□□ -0.32
HERC3-207ENST00000452979 VPS13AQ96RL7 3174 aa13.06□□□□□ -0.32
HERC3-207ENST00000452979 MTCL1Q9Y4B5 1905 aaKnown RBP13.06□□□□□ -0.32
HERC3-207ENST00000452979 NRP1O14786 923 aa13.06□□□□□ -0.32
HERC3-207ENST00000452979 PI15O43692 258 aa13.06□□□□□ -0.32
HERC3-207ENST00000452979 SEC24BO95487 1268 aa13.06□□□□□ -0.32
HERC3-207ENST00000452979 C1RP00736 705 aa13.06□□□□□ -0.32
HERC3-207ENST00000452979 QARSP47897 775 aaKnown RBP13.06□□□□□ -0.32
HERC3-207ENST00000452979 CCT2P78371 535 aaKnown RBP13.06□□□□□ -0.32
HERC3-207ENST00000452979 PPP2R5CQ13362 524 aa13.06□□□□□ -0.32
HERC3-207ENST00000452979 NPY5RQ15761 445 aa13.06□□□□□ -0.32
HERC3-207ENST00000452979 GALNT17Q6IS24 598 aa13.06□□□□□ -0.32
HERC3-207ENST00000452979 SRGAP1Q7Z6B7 1085 aa13.06□□□□□ -0.32
HERC3-207ENST00000452979 FRMD5Q7Z6J6 570 aa13.06□□□□□ -0.32
HERC3-207ENST00000452979 EXOC8Q8IYI6 725 aa13.06□□□□□ -0.32
HERC3-207ENST00000452979 CCDC105Q8IYK2 499 aa13.06□□□□□ -0.32
HERC3-207ENST00000452979 BLIDQ8IZY5 108 aa13.06□□□□□ -0.32
HERC3-207ENST00000452979 CNNM3Q8NE01 707 aa13.06□□□□□ -0.32
HERC3-207ENST00000452979 FLCNQ8NFG4 579 aa13.06□□□□□ -0.32
HERC3-207ENST00000452979 PRPF31Q8WWY3 499 aaKnown RBP13.06□□□□□ -0.32
HERC3-207ENST00000452979 RTP3Q9BQQ7 232 aa13.06□□□□□ -0.32
HERC3-207ENST00000452979 GBP3Q9H0R5 595 aa13.06□□□□□ -0.32
HERC3-207ENST00000452979 DHX33Q9H6R0 707 aaKnown RBP13.06□□□□□ -0.32
HERC3-207ENST00000452979 RSAD1Q9HA92 442 aa13.06□□□□□ -0.32
HERC3-207ENST00000452979 UBN1Q9NPG3 1134 aa13.06□□□□□ -0.32
HERC3-207ENST00000452979 SSX2IPQ9Y2D8 614 aa13.06□□□□□ -0.32
HERC3-207ENST00000452979 COL4A3BPQ9Y5P4 624 aa13.06□□□□□ -0.32
HERC3-207ENST00000452979 EML1O00423 815 aa13.05□□□□□ -0.32
HERC3-207ENST00000452979 INPPL1O15357 1258 aa13.05□□□□□ -0.32
HERC3-207ENST00000452979 DKC1O60832 514 aaKnown RBP eCLIP13.05□□□□□ -0.32
HERC3-207ENST00000452979 SOD2P04179 222 aa13.05□□□□□ -0.32
HERC3-207ENST00000452979 NCLP19338 710 aaKnown RBP13.05□□□□□ -0.32
HERC3-207ENST00000452979 PSMA5P28066 241 aa13.05□□□□□ -0.32
HERC3-207ENST00000452979 NPEPPSP55786 919 aa13.05□□□□□ -0.32
HERC3-207ENST00000452979 SSRP1Q08945 709 aaKnown RBP13.05□□□□□ -0.32
HERC3-207ENST00000452979 KIAA0319Q5VV43 1072 aa13.05□□□□□ -0.32
HERC3-207ENST00000452979 PLA2G4FQ68DD2 849 aa13.05□□□□□ -0.32
HERC3-207ENST00000452979 TRIM22Q8IYM9 498 aa13.05□□□□□ -0.32
HERC3-207ENST00000452979 RNF168Q8IYW5 571 aaPredicted RBP13.05□□□□□ -0.32
HERC3-207ENST00000452979 ZNF579Q8NAF0 562 aaKnown RBP13.05□□□□□ -0.32
HERC3-207ENST00000452979 SLC7A3Q8WY07 619 aa13.05□□□□□ -0.32
HERC3-207ENST00000452979 FAM20AQ96MK3 541 aa13.05□□□□□ -0.32
HERC3-207ENST00000452979 FAM193BQ96PV7 902 aaPredicted RBP13.05□□□□□ -0.32
HERC3-207ENST00000452979 RPS6KC1Q96S38 1066 aa13.05□□□□□ -0.32
HERC3-207ENST00000452979 MINDY3Q9H8M7 445 aa13.05□□□□□ -0.32
HERC3-207ENST00000452979 RXFP1Q9HBX9 757 aa13.05□□□□□ -0.32
HERC3-207ENST00000452979 NCOA5Q9HCD5 579 aaKnown RBP13.05□□□□□ -0.32
HERC3-207ENST00000452979 WDR6Q9NNW5 1121 aaKnown RBP13.05□□□□□ -0.32
HERC3-207ENST00000452979 KCNMB3Q9NPA1 279 aa13.05□□□□□ -0.32
HERC3-207ENST00000452979 WNT16Q9UBV4 365 aa13.05□□□□□ -0.32
HERC3-207ENST00000452979 DDX25Q9UHL0 483 aaKnown RBP13.05□□□□□ -0.32
HERC3-207ENST00000452979 DPP7Q9UHL4 492 aa13.05□□□□□ -0.32
HERC3-207ENST00000452979 VAV3Q9UKW4 847 aa13.05□□□□□ -0.32
HERC3-207ENST00000452979 DCHS1Q96JQ0 3298 aa13.04□□□□□ -0.32
HERC3-207ENST00000452979 CCDC195A0A1B0GUA6 201 aa13.04□□□□□ -0.32
HERC3-207ENST00000452979 ASAP2O43150 1006 aa13.04□□□□□ -0.32
HERC3-207ENST00000452979 N4BP1O75113 896 aaKnown RBP13.04□□□□□ -0.32
HERC3-207ENST00000452979 DEXIO95424 95 aa13.04□□□□□ -0.32
HERC3-207ENST00000452979 POMCP01189 267 aa13.04□□□□□ -0.32
HERC3-207ENST00000452979 SSBP05455 408 aaKnown RBP eCLIP13.04□□□□□ -0.32
HERC3-207ENST00000452979 P4HBP07237 508 aaKnown RBP13.04□□□□□ -0.32
HERC3-207ENST00000452979 SRGAP2CP0DJJ0 459 aa13.04□□□□□ -0.32
HERC3-207ENST00000452979 RFC5P40937 340 aa13.04□□□□□ -0.32
HERC3-207ENST00000452979 LAMTOR4Q0VGL1 99 aa13.04□□□□□ -0.32
HERC3-207ENST00000452979 NONOQ15233 471 aaKnown RBP eCLIP13.04□□□□□ -0.32
HERC3-207ENST00000452979 PCBP1Q15365 356 aaKnown RBP eCLIP13.04□□□□□ -0.32
HERC3-207ENST00000452979 TAS1R1Q7RTX1 841 aa13.04□□□□□ -0.32
HERC3-207ENST00000452979 ERMP1Q7Z2K6 904 aa13.04□□□□□ -0.32
HERC3-207ENST00000452979 COLGALT2Q8IYK4 626 aa13.04□□□□□ -0.32
HERC3-207ENST00000452979 DTWD2Q8NBA8 298 aa13.04□□□□□ -0.32
HERC3-207ENST00000452979 SMG8Q8ND04 991 aaKnown RBP13.04□□□□□ -0.32
HERC3-207ENST00000452979 HDAC7Q8WUI4 952 aa13.04□□□□□ -0.32
HERC3-207ENST00000452979 TCP11Q8WWU5 503 aa13.04□□□□□ -0.32
HERC3-207ENST00000452979 PSPC1Q8WXF1 523 aaKnown RBP13.04□□□□□ -0.32
HERC3-207ENST00000452979 NXPE3Q969Y0 559 aa13.04□□□□□ -0.32
HERC3-207ENST00000452979 ZNF274Q96GC6 653 aaPredicted RBP13.04□□□□□ -0.32
HERC3-207ENST00000452979 HERC2P3Q9BVR0 1158 aa13.04□□□□□ -0.32
HERC3-207ENST00000452979 MAN1C1Q9NR34 630 aa13.04□□□□□ -0.32
HERC3-207ENST00000452979 MARCH5Q9NX47 278 aa13.04□□□□□ -0.32
HERC3-207ENST00000452979 WRAP73Q9P2S5 460 aaPredicted RBP13.04□□□□□ -0.32
HERC3-207ENST00000452979 EPS15L1Q9UBC2 864 aa13.04□□□□□ -0.32
HERC3-207ENST00000452979 ARID2Q68CP9 1835 aa13.04□□□□□ -0.32
HERC3-207ENST00000452979 TDRD15B5MCY1 1934 aaKnown RBP13.03□□□□□ -0.32
HERC3-207ENST00000452979 SPDYE4A6NLX3 237 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms