RNA–Protein interactions for RNA: ENST00000452013.5

COL8A1-203, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 2

Gene COL8A1, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-203ENST00000452013 BSNDQ8WZ55 320 aa9.79□□□□□ -0.84
COL8A1-203ENST00000452013 GAS2L1Q99501 681 aaPredicted RBP9.79□□□□□ -0.84
COL8A1-203ENST00000452013 TRIM6Q9C030 488 aaPredicted RBP9.79□□□□□ -0.84
COL8A1-203ENST00000452013 TMEM117Q9H0C3 514 aa9.79□□□□□ -0.84
COL8A1-203ENST00000452013 PCDHB2Q9Y5E7 798 aa9.79□□□□□ -0.84
COL8A1-203ENST00000452013 DNAH12Q6ZR08 3092 aa9.79□□□□□ -0.84
COL8A1-203ENST00000452013 DOCK5Q9H7D0 1870 aa9.79□□□□□ -0.84
COL8A1-203ENST00000452013 NPHP3-ACAD11A0A0J9YXS1 232 aa9.78□□□□□ -0.84
COL8A1-203ENST00000452013 LCHNA4D1U4 455 aa9.78□□□□□ -0.84
COL8A1-203ENST00000452013 TBKBP1A7MCY6 615 aa9.78□□□□□ -0.84
COL8A1-203ENST00000452013 N4BP3O15049 544 aa9.78□□□□□ -0.84
COL8A1-203ENST00000452013 PRKCBP05771 671 aa9.78□□□□□ -0.84
COL8A1-203ENST00000452013 ITGA4P13612 1032 aa9.78□□□□□ -0.84
COL8A1-203ENST00000452013 ARF4P18085 180 aaPredicted RBP9.78□□□□□ -0.84
COL8A1-203ENST00000452013 CMA1P23946 247 aa9.78□□□□□ -0.84
COL8A1-203ENST00000452013 BMPR1AP36894 532 aa9.78□□□□□ -0.84
COL8A1-203ENST00000452013 STRN3Q13033 797 aa9.78□□□□□ -0.84
COL8A1-203ENST00000452013 MAPK7Q13164 816 aa9.78□□□□□ -0.84
COL8A1-203ENST00000452013 AMHR2Q16671 573 aa9.78□□□□□ -0.84
COL8A1-203ENST00000452013 SPOUT1Q5T280 376 aaKnown RBP9.78□□□□□ -0.84
COL8A1-203ENST00000452013 RESP18Q5W5W9 173 aa9.78□□□□□ -0.84
COL8A1-203ENST00000452013 SLC27A1Q6PCB7 646 aa9.78□□□□□ -0.84
COL8A1-203ENST00000452013 GLB1LQ6UWU2 654 aa9.78□□□□□ -0.84
COL8A1-203ENST00000452013 ZNF598Q86UK7 904 aaKnown RBP9.78□□□□□ -0.84
COL8A1-203ENST00000452013 ARNTL2Q8WYA1 636 aa9.78□□□□□ -0.84
COL8A1-203ENST00000452013 CPB2Q96IY4 423 aa9.78□□□□□ -0.84
COL8A1-203ENST00000452013 CDX2Q99626 313 aaPredicted RBP9.78□□□□□ -0.84
COL8A1-203ENST00000452013 REEP2Q9BRK0 252 aa9.78□□□□□ -0.84
COL8A1-203ENST00000452013 ADPGKQ9BRR6 497 aa9.78□□□□□ -0.84
COL8A1-203ENST00000452013 ZHX3Q9H4I2 956 aa9.78□□□□□ -0.84
COL8A1-203ENST00000452013 CERS4Q9HA82 394 aa9.78□□□□□ -0.84
COL8A1-203ENST00000452013 PARVGQ9HBI0 331 aa9.78□□□□□ -0.84
COL8A1-203ENST00000452013 AAASQ9NRG9 546 aa9.78□□□□□ -0.84
COL8A1-203ENST00000452013 PDE4DIPQ5VU43 2346 aa9.78□□□□□ -0.84
COL8A1-203ENST00000452013 ADGRA3Q8IWK6 1321 aa9.78□□□□□ -0.84
COL8A1-203ENST00000452013 CARNS1A5YM72 827 aa9.77□□□□□ -0.85
COL8A1-203ENST00000452013 GOLGA6L4A6NEF3 574 aa9.77□□□□□ -0.85
COL8A1-203ENST00000452013 RBAK-RBAKDNI3L0D1 243 aa9.77□□□□□ -0.85
COL8A1-203ENST00000452013 SLC16A4O15374 487 aa9.77□□□□□ -0.85
COL8A1-203ENST00000452013 POLR2DO15514 142 aaKnown RBP9.77□□□□□ -0.85
COL8A1-203ENST00000452013 TRAK2O60296 914 aa9.77□□□□□ -0.85
COL8A1-203ENST00000452013 FGFR1P11362 822 aa9.77□□□□□ -0.85
COL8A1-203ENST00000452013 GAP43P17677 238 aa9.77□□□□□ -0.85
COL8A1-203ENST00000452013 ZNF131P52739 623 aa9.77□□□□□ -0.85
COL8A1-203ENST00000452013 CACNB1Q02641 598 aaPredicted RBP9.77□□□□□ -0.85
COL8A1-203ENST00000452013 CSPP1Q1MSJ5 1256 aa9.77□□□□□ -0.85
COL8A1-203ENST00000452013 PAN2Q504Q3 1202 aaKnown RBP9.77□□□□□ -0.85
COL8A1-203ENST00000452013 NAALADL2Q58DX5 795 aa9.77□□□□□ -0.85
COL8A1-203ENST00000452013 UBXN11Q5T124 520 aa9.77□□□□□ -0.85
COL8A1-203ENST00000452013 DYMQ7RTS9 669 aa9.77□□□□□ -0.85
COL8A1-203ENST00000452013 TMEM192Q8IY95 271 aa9.77□□□□□ -0.85
COL8A1-203ENST00000452013 CEP57L1Q8IYX8 460 aa9.77□□□□□ -0.85
COL8A1-203ENST00000452013 LRRC15Q8TF66 581 aa9.77□□□□□ -0.85
COL8A1-203ENST00000452013 DDX12PQ92771 950 aa9.77□□□□□ -0.85
COL8A1-203ENST00000452013 CLP1Q92989 425 aaKnown RBP9.77□□□□□ -0.85
COL8A1-203ENST00000452013 DHX58Q96C10 678 aa9.77□□□□□ -0.85
COL8A1-203ENST00000452013 CASD1Q96PB1 797 aa9.77□□□□□ -0.85
COL8A1-203ENST00000452013 TCHPQ9BT92 498 aa9.77□□□□□ -0.85
COL8A1-203ENST00000452013 MRPL9Q9BYD2 267 aaKnown RBP9.77□□□□□ -0.85
COL8A1-203ENST00000452013 MRPL4Q9BYD3 311 aaKnown RBP9.77□□□□□ -0.85
COL8A1-203ENST00000452013 CCDC113Q9H0I3 377 aa9.77□□□□□ -0.85
COL8A1-203ENST00000452013 TNMDQ9H2S6 317 aa9.77□□□□□ -0.85
COL8A1-203ENST00000452013 PRDM12Q9H4Q4 367 aa9.77□□□□□ -0.85
COL8A1-203ENST00000452013 MAGEF1Q9HAY2 307 aa9.77□□□□□ -0.85
COL8A1-203ENST00000452013 RC3H2Q9HBD1 1191 aaKnown RBP9.77□□□□□ -0.85
COL8A1-203ENST00000452013 ARHGAP28Q9P2N2 729 aa9.77□□□□□ -0.85
COL8A1-203ENST00000452013 KANSL3Q9P2N6 904 aa9.77□□□□□ -0.85
COL8A1-203ENST00000452013 SEL1LQ9UBV2 794 aa9.77□□□□□ -0.85
COL8A1-203ENST00000452013 USP25Q9UHP3 1055 aa9.77□□□□□ -0.85
COL8A1-203ENST00000452013 KCNH3Q9ULD8 1083 aa9.77□□□□□ -0.85
COL8A1-203ENST00000452013 CNTNAP2Q9UHC6 1331 aa9.77□□□□□ -0.85
COL8A1-203ENST00000452013 A0A087X0B3 334 aa9.76□□□□□ -0.85
COL8A1-203ENST00000452013 A0A1W2PQ27 194 aa9.76□□□□□ -0.85
COL8A1-203ENST00000452013 A0A1W2PQ64 194 aa9.76□□□□□ -0.85
COL8A1-203ENST00000452013 A0A1W2PQD8 194 aa9.76□□□□□ -0.85
COL8A1-203ENST00000452013 MYMKA6NI61 221 aa9.76□□□□□ -0.85
COL8A1-203ENST00000452013 B4GALT5O43286 388 aa9.76□□□□□ -0.85
COL8A1-203ENST00000452013 GTPBP6O43824 516 aaPredicted RBP9.76□□□□□ -0.85
COL8A1-203ENST00000452013 OFD1O75665 1012 aa9.76□□□□□ -0.85
COL8A1-203ENST00000452013 NPTXRO95502 500 aa9.76□□□□□ -0.85
COL8A1-203ENST00000452013 MAPTP10636 758 aaKnown RBP9.76□□□□□ -0.85
COL8A1-203ENST00000452013 IDEP14735 1019 aa9.76□□□□□ -0.85
COL8A1-203ENST00000452013 IGFBP4P22692 258 aa9.76□□□□□ -0.85
COL8A1-203ENST00000452013 NCKAP1LP55160 1127 aa9.76□□□□□ -0.85
COL8A1-203ENST00000452013 EPC2Q52LR7 807 aa9.76□□□□□ -0.85
COL8A1-203ENST00000452013 NT5DC1Q5TFE4 455 aa9.76□□□□□ -0.85
COL8A1-203ENST00000452013 ATF7IP2Q5U623 682 aa9.76□□□□□ -0.85
COL8A1-203ENST00000452013 HAUS6Q7Z4H7 955 aa9.76□□□□□ -0.85
COL8A1-203ENST00000452013 FAM178BQ8IXR5 827 aa9.76□□□□□ -0.85
COL8A1-203ENST00000452013 CCDC65Q8IXS2 484 aa9.76□□□□□ -0.85
COL8A1-203ENST00000452013 TMEM161BQ8NDZ6 487 aa9.76□□□□□ -0.85
COL8A1-203ENST00000452013 FBXO22Q8NEZ5 403 aa9.76□□□□□ -0.85
COL8A1-203ENST00000452013 URGCPQ8TCY9 931 aa9.76□□□□□ -0.85
COL8A1-203ENST00000452013 MYLIPQ8WY64 445 aa9.76□□□□□ -0.85
COL8A1-203ENST00000452013 KCNN1Q92952 543 aa9.76□□□□□ -0.85
COL8A1-203ENST00000452013 GUCD1Q96NT3 240 aa9.76□□□□□ -0.85
COL8A1-203ENST00000452013 C17orf80Q9BSJ5 609 aa9.76□□□□□ -0.85
COL8A1-203ENST00000452013 KIFC3Q9BVG8 833 aa9.76□□□□□ -0.85
COL8A1-203ENST00000452013 PLVAPQ9BX97 442 aa9.76□□□□□ -0.85
COL8A1-203ENST00000452013 RSAD1Q9HA92 442 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms