RNA–Protein interactions for RNA: ENST00000451859.5

RFX3-209, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-209ENST00000451859 PRPF31Q8WWY3 499 aaKnown RBP9.68□□□□□ -0.86
RFX3-209ENST00000451859 PSPC1Q8WXF1 523 aaKnown RBP9.68□□□□□ -0.86
RFX3-209ENST00000451859 PPP2R3CQ969Q6 453 aa9.68□□□□□ -0.86
RFX3-209ENST00000451859 CASD1Q96PB1 797 aa9.68□□□□□ -0.86
RFX3-209ENST00000451859 TMEM60Q9H2L4 133 aa9.68□□□□□ -0.86
RFX3-209ENST00000451859 CWH43Q9H720 699 aa9.68□□□□□ -0.86
RFX3-209ENST00000451859 ZSWIM4Q9H7M6 989 aa9.68□□□□□ -0.86
RFX3-209ENST00000451859 DACT1Q9NYF0 836 aa9.68□□□□□ -0.86
RFX3-209ENST00000451859 INPP5FQ9Y2H2 1132 aa9.68□□□□□ -0.86
RFX3-209ENST00000451859 TRIOO75962 3097 aa9.68□□□□□ -0.86
RFX3-209ENST00000451859 MYO10Q9HD67 2058 aa9.67□□□□□ -0.86
RFX3-209ENST00000451859 C2orf16Q68DN1 1984 aa9.67□□□□□ -0.86
RFX3-209ENST00000451859 GRXCR2A6NFK2 248 aa9.67□□□□□ -0.86
RFX3-209ENST00000451859 MEIS3P2A8K0S8 358 aa9.67□□□□□ -0.86
RFX3-209ENST00000451859 NT5C1B-RDH14C9J2C7 533 aa9.67□□□□□ -0.86
RFX3-209ENST00000451859 SMAPO00193 183 aa9.67□□□□□ -0.86
RFX3-209ENST00000451859 PER2O15055 1255 aa9.67□□□□□ -0.86
RFX3-209ENST00000451859 SLITRK3O94933 977 aa9.67□□□□□ -0.86
RFX3-209ENST00000451859 LTBRP36941 435 aa9.67□□□□□ -0.86
RFX3-209ENST00000451859 RFC5P40937 340 aa9.67□□□□□ -0.86
RFX3-209ENST00000451859 PHKA2P46019 1235 aa9.67□□□□□ -0.86
RFX3-209ENST00000451859 CDC42EP1Q00587 391 aa9.67□□□□□ -0.86
RFX3-209ENST00000451859 LAMTOR4Q0VGL1 99 aa9.67□□□□□ -0.86
RFX3-209ENST00000451859 ZNF174Q15697 407 aa9.67□□□□□ -0.86
RFX3-209ENST00000451859 NAALADL2Q58DX5 795 aa9.67□□□□□ -0.86
RFX3-209ENST00000451859 PLPP4Q5VZY2 271 aa9.67□□□□□ -0.86
RFX3-209ENST00000451859 MAEAQ7L5Y9 396 aa9.67□□□□□ -0.86
RFX3-209ENST00000451859 RNF149Q8NC42 400 aa9.67□□□□□ -0.86
RFX3-209ENST00000451859 NEK9Q8TD19 979 aa9.67□□□□□ -0.86
RFX3-209ENST00000451859 PIGOQ8TEQ8 1089 aa9.67□□□□□ -0.86
RFX3-209ENST00000451859 TCP11Q8WWU5 503 aa9.67□□□□□ -0.86
RFX3-209ENST00000451859 ZSCAN31Q96LW9 406 aaPredicted RBP9.67□□□□□ -0.86
RFX3-209ENST00000451859 ZNF558Q96NG5 402 aa9.67□□□□□ -0.86
RFX3-209ENST00000451859 LLPHQ9BRT6 129 aaKnown RBP9.67□□□□□ -0.86
RFX3-209ENST00000451859 INO80BQ9C086 356 aaPredicted RBP9.67□□□□□ -0.86
RFX3-209ENST00000451859 GBP3Q9H0R5 595 aa9.67□□□□□ -0.86
RFX3-209ENST00000451859 DHX33Q9H6R0 707 aaKnown RBP9.67□□□□□ -0.86
RFX3-209ENST00000451859 TLE6Q9H808 572 aa9.67□□□□□ -0.86
RFX3-209ENST00000451859 MINDY3Q9H8M7 445 aa9.67□□□□□ -0.86
RFX3-209ENST00000451859 IFT122Q9HBG6 1241 aa9.67□□□□□ -0.86
RFX3-209ENST00000451859 CD320Q9NPF0 282 aa9.67□□□□□ -0.86
RFX3-209ENST00000451859 ENTPD7Q9NQZ7 604 aa9.67□□□□□ -0.86
RFX3-209ENST00000451859 TLR9Q9NR96 1032 aa9.67□□□□□ -0.86
RFX3-209ENST00000451859 SH2B1Q9NRF2 756 aaPredicted RBP9.67□□□□□ -0.86
RFX3-209ENST00000451859 BARX2Q9UMQ3 279 aaPredicted RBP9.67□□□□□ -0.86
RFX3-209ENST00000451859 PLXNA3P51805 1871 aa9.67□□□□□ -0.86
RFX3-209ENST00000451859 CITO14578 2027 aa9.66□□□□□ -0.86
RFX3-209ENST00000451859 A0A0U1RQF3 1178 aa9.66□□□□□ -0.86
RFX3-209ENST00000451859 USO1O60763 962 aaKnown RBP9.66□□□□□ -0.86
RFX3-209ENST00000451859 ZC3H11AO75152 810 aaKnown RBP eCLIP9.66□□□□□ -0.86
RFX3-209ENST00000451859 ERLIN2O94905 339 aa9.66□□□□□ -0.86
RFX3-209ENST00000451859 TECP42680 631 aa9.66□□□□□ -0.86
RFX3-209ENST00000451859 ERVFC1P60507 584 aa9.66□□□□□ -0.86
RFX3-209ENST00000451859 HMGN5P82970 282 aaKnown RBP9.66□□□□□ -0.86
RFX3-209ENST00000451859 RBM10P98175 930 aaKnown RBP9.66□□□□□ -0.86
RFX3-209ENST00000451859 NBR1Q14596 966 aa9.66□□□□□ -0.86
RFX3-209ENST00000451859 TTC38Q5R3I4 469 aa9.66□□□□□ -0.86
RFX3-209ENST00000451859 KCNT2Q6UVM3 1135 aa9.66□□□□□ -0.86
RFX3-209ENST00000451859 ZNF598Q86UK7 904 aaKnown RBP9.66□□□□□ -0.86
RFX3-209ENST00000451859 FERMT3Q86UX7 667 aa9.66□□□□□ -0.86
RFX3-209ENST00000451859 MTMR9Q96QG7 549 aa9.66□□□□□ -0.86
RFX3-209ENST00000451859 EPHX3Q9H6B9 360 aa9.66□□□□□ -0.86
RFX3-209ENST00000451859 XPNPEP1Q9NQW7 623 aa9.66□□□□□ -0.86
RFX3-209ENST00000451859 AGPAT5Q9NUQ2 364 aa9.66□□□□□ -0.86
RFX3-209ENST00000451859 FAM105AQ9NUU6 356 aa9.66□□□□□ -0.86
RFX3-209ENST00000451859 RAPGEFL1Q9UHV5 662 aa9.66□□□□□ -0.86
RFX3-209ENST00000451859 MTCL1Q9Y4B5 1905 aaKnown RBP9.65□□□□□ -0.86
RFX3-209ENST00000451859 FAM86C2PA6NEL3 165 aa9.65□□□□□ -0.86
RFX3-209ENST00000451859 INO80B-WBP1J3KQ70 363 aa9.65□□□□□ -0.86
RFX3-209ENST00000451859 NCK2O43639 380 aa9.65□□□□□ -0.86
RFX3-209ENST00000451859 EOMESO95936 686 aa9.65□□□□□ -0.86
RFX3-209ENST00000451859 OR52Z1P0C646 297 aa9.65□□□□□ -0.86
RFX3-209ENST00000451859 RAB27AP51159 221 aa9.65□□□□□ -0.86
RFX3-209ENST00000451859 UBE3AQ05086 875 aa9.65□□□□□ -0.86
RFX3-209ENST00000451859 RNASELQ05823 741 aaKnown RBP9.65□□□□□ -0.86
RFX3-209ENST00000451859 COL19A1Q14993 1142 aa9.65□□□□□ -0.86
RFX3-209ENST00000451859 CSPP1Q1MSJ5 1256 aa9.65□□□□□ -0.86
RFX3-209ENST00000451859 CTC1Q2NKJ3 1217 aa9.65□□□□□ -0.86
RFX3-209ENST00000451859 PUS10Q3MIT2 529 aaKnown RBP9.65□□□□□ -0.86
RFX3-209ENST00000451859 LLGL2Q6P1M3 1020 aa9.65□□□□□ -0.86
RFX3-209ENST00000451859 GLB1LQ6UWU2 654 aa9.65□□□□□ -0.86
RFX3-209ENST00000451859 FAM43BQ6ZT52 329 aaPredicted RBP9.65□□□□□ -0.86
RFX3-209ENST00000451859 SRGAP1Q7Z6B7 1085 aa9.65□□□□□ -0.86
RFX3-209ENST00000451859 FAM178BQ8IXR5 827 aa9.65□□□□□ -0.86
RFX3-209ENST00000451859 EXOC8Q8IYI6 725 aa9.65□□□□□ -0.86
RFX3-209ENST00000451859 GJD3Q8N144 294 aa9.65□□□□□ -0.86
RFX3-209ENST00000451859 FBXO18Q8NFZ0 1043 aa9.65□□□□□ -0.86
RFX3-209ENST00000451859 ASAP3Q8TDY4 903 aa9.65□□□□□ -0.86
RFX3-209ENST00000451859 MRPS27Q92552 414 aaKnown RBP9.65□□□□□ -0.86
RFX3-209ENST00000451859 CPB2Q96IY4 423 aa9.65□□□□□ -0.86
RFX3-209ENST00000451859 HSD17B14Q9BPX1 270 aa9.65□□□□□ -0.86
RFX3-209ENST00000451859 TCF25Q9BQ70 676 aa9.65□□□□□ -0.86
RFX3-209ENST00000451859 APOL6Q9BWW8 343 aa9.65□□□□□ -0.86
RFX3-209ENST00000451859 MRPL9Q9BYD2 267 aaKnown RBP9.65□□□□□ -0.86
RFX3-209ENST00000451859 FOXP1Q9H334 677 aaPredicted RBP9.65□□□□□ -0.86
RFX3-209ENST00000451859 GPRC5CQ9NQ84 441 aa9.65□□□□□ -0.86
RFX3-209ENST00000451859 CHST12Q9NRB3 414 aa9.65□□□□□ -0.86
RFX3-209ENST00000451859 SPG21Q9NZD8 308 aa9.65□□□□□ -0.86
RFX3-209ENST00000451859 PUF60Q9UHX1 559 aaKnown RBP9.65□□□□□ -0.86
RFX3-209ENST00000451859 CD207Q9UJ71 328 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms