RNA–Protein interactions for RNA: ENST00000450686.1

LINC01004-202, Transcript of long intergenic non-protein coding RNA 1004, humanhuman

TSL 3 BASIC

Gene LINC01004, Length 538 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01004-202ENST00000450686 MCTP2Q6DN12 878 aa11.4□□□□□ -0.58
LINC01004-202ENST00000450686 CATSPER4Q7RTX7 472 aa11.4□□□□□ -0.58
LINC01004-202ENST00000450686 BLIDQ8IZY5 108 aa11.4□□□□□ -0.58
LINC01004-202ENST00000450686 TMEM169Q96HH4 297 aa11.4□□□□□ -0.58
LINC01004-202ENST00000450686 NIFKQ9BYG3 293 aaKnown RBP11.4□□□□□ -0.58
LINC01004-202ENST00000450686 ADAM7Q9H2U9 754 aa11.4□□□□□ -0.58
LINC01004-202ENST00000450686 FAM105AQ9NUU6 356 aa11.4□□□□□ -0.58
LINC01004-202ENST00000450686 LIMD1Q9UGP4 676 aa11.4□□□□□ -0.58
LINC01004-202ENST00000450686 FRYLO94915 3013 aa11.4□□□□□ -0.58
LINC01004-202ENST00000450686 MAFO75444 373 aaPredicted RBP11.39□□□□□ -0.59
LINC01004-202ENST00000450686 OFD1O75665 1012 aa11.39□□□□□ -0.59
LINC01004-202ENST00000450686 DDHD2O94830 711 aa11.39□□□□□ -0.59
LINC01004-202ENST00000450686 EOMESO95936 686 aa11.39□□□□□ -0.59
LINC01004-202ENST00000450686 POMCP01189 267 aa11.39□□□□□ -0.59
LINC01004-202ENST00000450686 GALTP07902 379 aa11.39□□□□□ -0.59
LINC01004-202ENST00000450686 SRGAP2CP0DJJ0 459 aa11.39□□□□□ -0.59
LINC01004-202ENST00000450686 SFPQP23246 707 aaKnown RBP eCLIP11.39□□□□□ -0.592e-6■□□□□ 8.8
LINC01004-202ENST00000450686 LETM2Q2VYF4 491 aa11.39□□□□□ -0.59
LINC01004-202ENST00000450686 ARSIQ5FYB1 569 aa11.39□□□□□ -0.59
LINC01004-202ENST00000450686 NOMO2Q5JPE7 1267 aa11.39□□□□□ -0.59
LINC01004-202ENST00000450686 EARS2Q5JPH6 523 aaKnown RBP11.39□□□□□ -0.59
LINC01004-202ENST00000450686 RUFY3Q7L099 469 aa11.39□□□□□ -0.59
LINC01004-202ENST00000450686 TMEM105Q8N8V8 129 aa11.39□□□□□ -0.59
LINC01004-202ENST00000450686 ST13P5Q8NFI4 369 aaPredicted RBP11.39□□□□□ -0.59
LINC01004-202ENST00000450686 ATOH1Q92858 354 aaPredicted RBP11.39□□□□□ -0.59
LINC01004-202ENST00000450686 IGSF21Q96ID5 467 aa11.39□□□□□ -0.59
LINC01004-202ENST00000450686 RIPOR3Q96MK2 946 aa11.39□□□□□ -0.59
LINC01004-202ENST00000450686 MRPL9Q9BYD2 267 aaKnown RBP11.39□□□□□ -0.59
LINC01004-202ENST00000450686 DACT1Q9NYF0 836 aa11.39□□□□□ -0.59
LINC01004-202ENST00000450686 DDX25Q9UHL0 483 aaKnown RBP11.39□□□□□ -0.59
LINC01004-202ENST00000450686 VAV3Q9UKW4 847 aa11.39□□□□□ -0.59
LINC01004-202ENST00000450686 CYP3A7-CYP3A51PA0A087WV96 503 aa11.38□□□□□ -0.59
LINC01004-202ENST00000450686 C2CD2LO14523 706 aa11.38□□□□□ -0.59
LINC01004-202ENST00000450686 HOXB8P17481 243 aaPredicted RBP11.38□□□□□ -0.59
LINC01004-202ENST00000450686 CYP3A7P24462 503 aa11.38□□□□□ -0.59
LINC01004-202ENST00000450686 FOSBP53539 338 aa11.38□□□□□ -0.59
LINC01004-202ENST00000450686 RNASELQ05823 741 aaKnown RBP11.38□□□□□ -0.59
LINC01004-202ENST00000450686 PTPN14Q15678 1187 aa11.38□□□□□ -0.59
LINC01004-202ENST00000450686 TPRNQ4KMQ1 711 aa11.38□□□□□ -0.59
LINC01004-202ENST00000450686 UBXN11Q5T124 520 aa11.38□□□□□ -0.59
LINC01004-202ENST00000450686 CES5AQ6NT32 575 aa11.38□□□□□ -0.59
LINC01004-202ENST00000450686 GLB1LQ6UWU2 654 aa11.38□□□□□ -0.59
LINC01004-202ENST00000450686 AGMOQ6ZNB7 445 aa11.38□□□□□ -0.59
LINC01004-202ENST00000450686 TAS1R1Q7RTX1 841 aa11.38□□□□□ -0.59
LINC01004-202ENST00000450686 TRIM22Q8IYM9 498 aa11.38□□□□□ -0.59
LINC01004-202ENST00000450686 TMEM87AQ8NBN3 555 aa11.38□□□□□ -0.59
LINC01004-202ENST00000450686 SLC22A17Q8WUG5 538 aa11.38□□□□□ -0.59
LINC01004-202ENST00000450686 PRPF31Q8WWY3 499 aaKnown RBP11.38□□□□□ -0.59
LINC01004-202ENST00000450686 MBOAT7Q96N66 472 aa11.38□□□□□ -0.59
LINC01004-202ENST00000450686 SLKQ9H2G2 1235 aaPredicted RBP11.38□□□□□ -0.59
LINC01004-202ENST00000450686 IFT122Q9HBG6 1241 aa11.38□□□□□ -0.59
LINC01004-202ENST00000450686 SH3GLB2Q9NR46 395 aa11.38□□□□□ -0.59
LINC01004-202ENST00000450686 CYP26B1Q9NR63 512 aa11.38□□□□□ -0.59
LINC01004-202ENST00000450686 RGL1Q9NZL6 768 aa11.38□□□□□ -0.59
LINC01004-202ENST00000450686 DBR1Q9UK59 544 aaKnown RBP11.38□□□□□ -0.59
LINC01004-202ENST00000450686 PRG3Q9Y2Y8 225 aaPredicted RBP11.38□□□□□ -0.59
LINC01004-202ENST00000450686 NR2E1Q9Y466 385 aa11.38□□□□□ -0.59
LINC01004-202ENST00000450686 PCDHB2Q9Y5E7 798 aa11.38□□□□□ -0.59
LINC01004-202ENST00000450686 DOCK6Q96HP0 2047 aa11.38□□□□□ -0.59
LINC01004-202ENST00000450686 FAM186AA6NE01 2351 aa11.37□□□□□ -0.59
LINC01004-202ENST00000450686 A0A087WWV3 80 aa11.37□□□□□ -0.59
LINC01004-202ENST00000450686 CPLX1O14810 134 aa11.37□□□□□ -0.59
LINC01004-202ENST00000450686 DEXIO95424 95 aa11.37□□□□□ -0.59
LINC01004-202ENST00000450686 CTSAP10619 480 aa11.37□□□□□ -0.59
LINC01004-202ENST00000450686 PSMA5P28066 241 aa11.37□□□□□ -0.59
LINC01004-202ENST00000450686 DNM2P50570 870 aa11.37□□□□□ -0.59
LINC01004-202ENST00000450686 EVCP57679 992 aa11.37□□□□□ -0.59
LINC01004-202ENST00000450686 PSMC5P62195 406 aa11.37□□□□□ -0.59
LINC01004-202ENST00000450686 CYP4A11Q02928 519 aa11.37□□□□□ -0.59
LINC01004-202ENST00000450686 CTTNQ14247 550 aaKnown RBP11.37□□□□□ -0.59
LINC01004-202ENST00000450686 NONOQ15233 471 aaKnown RBP eCLIP11.37□□□□□ -0.597e-7■□□□□ 10.5
LINC01004-202ENST00000450686 NCAPH2Q6IBW4 605 aa11.37□□□□□ -0.59
LINC01004-202ENST00000450686 KIAA1841Q6NSI8 718 aa11.37□□□□□ -0.59
LINC01004-202ENST00000450686 DDX53Q86TM3 631 aaKnown RBP11.37□□□□□ -0.59
LINC01004-202ENST00000450686 FBXL16Q8N461 479 aa11.37□□□□□ -0.59
LINC01004-202ENST00000450686 TDRD5Q8NAT2 981 aaKnown RBP11.37□□□□□ -0.59
LINC01004-202ENST00000450686 RDM1Q8NG50 284 aa11.37□□□□□ -0.59
LINC01004-202ENST00000450686 RABGGTAQ92696 567 aa11.37□□□□□ -0.59
LINC01004-202ENST00000450686 CPB2Q96IY4 423 aa11.37□□□□□ -0.59
LINC01004-202ENST00000450686 B3GALT6Q96L58 329 aa11.37□□□□□ -0.59
LINC01004-202ENST00000450686 APOL6Q9BWW8 343 aa11.37□□□□□ -0.59
LINC01004-202ENST00000450686 CHST12Q9NRB3 414 aa11.37□□□□□ -0.59
LINC01004-202ENST00000450686 AGPAT5Q9NUQ2 364 aa11.37□□□□□ -0.59
LINC01004-202ENST00000450686 CACNG4Q9UBN1 327 aa11.37□□□□□ -0.59
LINC01004-202ENST00000450686 SORCS3Q9UPU3 1222 aa11.37□□□□□ -0.59
LINC01004-202ENST00000450686 HES2Q9Y543 173 aa11.37□□□□□ -0.59
LINC01004-202ENST00000450686 COL4A3BPQ9Y5P4 624 aa11.37□□□□□ -0.59
LINC01004-202ENST00000450686 GVINP1Q7Z2Y8 2422 aa11.36□□□□□ -0.59
LINC01004-202ENST00000450686 FSD2A1L4K1 749 aa11.36□□□□□ -0.59
LINC01004-202ENST00000450686 GFRA3O60609 400 aa11.36□□□□□ -0.59
LINC01004-202ENST00000450686 CNPP09543 421 aaKnown RBP11.36□□□□□ -0.59
LINC01004-202ENST00000450686 SPATA31D3P0C874 917 aa11.36□□□□□ -0.59
LINC01004-202ENST00000450686 HOXA11P31270 313 aaPredicted RBP11.36□□□□□ -0.59
LINC01004-202ENST00000450686 MTHFRP42898 656 aa11.36□□□□□ -0.59
LINC01004-202ENST00000450686 POLGP54098 1239 aaPredicted RBP11.36□□□□□ -0.59
LINC01004-202ENST00000450686 ITIH3Q06033 890 aa11.36□□□□□ -0.59
LINC01004-202ENST00000450686 LAMTOR4Q0VGL1 99 aa11.36□□□□□ -0.59
LINC01004-202ENST00000450686 SCRN1Q12765 414 aa11.36□□□□□ -0.59
LINC01004-202ENST00000450686 MTMR3Q13615 1198 aa11.36□□□□□ -0.59
LINC01004-202ENST00000450686 SPATA31D4Q6ZUB0 917 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms