RNA–Protein interactions for RNA: ENST00000449537.1

AC004540.1-204, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 727 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-204ENST00000449537 TAS1R1Q7RTX1 841 aa14.28□□□□□ -0.12
AC004540.1-204ENST00000449537 TRMT1LQ7Z2T5 733 aaKnown RBP14.28□□□□□ -0.12
AC004540.1-204ENST00000449537 ZNF668Q96K58 619 aaPredicted RBP14.28□□□□□ -0.12
AC004540.1-204ENST00000449537 SCLT1Q96NL6 688 aa14.28□□□□□ -0.12
AC004540.1-204ENST00000449537 IER2Q9BTL4 223 aa14.28□□□□□ -0.12
AC004540.1-204ENST00000449537 PHF20Q9BVI0 1012 aa14.28□□□□□ -0.12
AC004540.1-204ENST00000449537 CHRDQ9H2X0 955 aa14.28□□□□□ -0.12
AC004540.1-204ENST00000449537 MTCL1Q9Y4B5 1905 aaKnown RBP14.27□□□□□ -0.12
AC004540.1-204ENST00000449537 B4GALT3O60512 393 aa14.27□□□□□ -0.13
AC004540.1-204ENST00000449537 DDHD2O94830 711 aa14.27□□□□□ -0.13
AC004540.1-204ENST00000449537 ATP4AP20648 1035 aa14.27□□□□□ -0.13
AC004540.1-204ENST00000449537 SF3A2Q15428 464 aaKnown RBP14.27□□□□□ -0.13
AC004540.1-204ENST00000449537 TWF2Q6IBS0 349 aaKnown RBP14.27□□□□□ -0.13
AC004540.1-204ENST00000449537 PSAPL1Q6NUJ1 521 aa14.27□□□□□ -0.13
AC004540.1-204ENST00000449537 URGCPQ8TCY9 931 aa14.27□□□□□ -0.13
AC004540.1-204ENST00000449537 FGF13Q92913 245 aa14.27□□□□□ -0.13
AC004540.1-204ENST00000449537 RRP36Q96EU6 259 aaKnown RBP14.27□□□□□ -0.13
AC004540.1-204ENST00000449537 KIF12Q96FN5 646 aa14.27□□□□□ -0.13
AC004540.1-204ENST00000449537 KXD1Q9BQD3 176 aa14.27□□□□□ -0.13
AC004540.1-204ENST00000449537 TMEM175Q9BSA9 504 aa14.27□□□□□ -0.13
AC004540.1-204ENST00000449537 HERC2P3Q9BVR0 1158 aa14.27□□□□□ -0.13
AC004540.1-204ENST00000449537 TRAIPQ9BWF2 469 aa14.27□□□□□ -0.13
AC004540.1-204ENST00000449537 PCDHA6Q9UN73 950 aa14.27□□□□□ -0.13
AC004540.1-204ENST00000449537 CEP131Q9UPN4 1083 aa14.27□□□□□ -0.13
AC004540.1-204ENST00000449537 PCDHA8Q9Y5H6 950 aa14.27□□□□□ -0.13
AC004540.1-204ENST00000449537 DOCK6Q96HP0 2047 aa14.27□□□□□ -0.13
AC004540.1-204ENST00000449537 GCN1Q92616 2671 aaKnown RBP14.26□□□□□ -0.13
AC004540.1-204ENST00000449537 DDX39AO00148 427 aaKnown RBP14.26□□□□□ -0.13
AC004540.1-204ENST00000449537 NRP1O14786 923 aa14.26□□□□□ -0.13
AC004540.1-204ENST00000449537 TGM5O43548 720 aa14.26□□□□□ -0.13
AC004540.1-204ENST00000449537 CCNE2O96020 404 aa14.26□□□□□ -0.13
AC004540.1-204ENST00000449537 NEFLP07196 543 aa14.26□□□□□ -0.13
AC004540.1-204ENST00000449537 ZNF806P0C7X5 589 aa14.26□□□□□ -0.13
AC004540.1-204ENST00000449537 KIF5BP33176 963 aa14.26□□□□□ -0.13
AC004540.1-204ENST00000449537 CXCL12P48061 93 aa14.26□□□□□ -0.13
AC004540.1-204ENST00000449537 GLUD2P49448 558 aa14.26□□□□□ -0.13
AC004540.1-204ENST00000449537 FOXC1Q12948 553 aa14.26□□□□□ -0.13
AC004540.1-204ENST00000449537 SRSF5Q13243 272 aaKnown RBP14.26□□□□□ -0.13
AC004540.1-204ENST00000449537 ITGB3BPQ13352 177 aaPredicted RBP14.26□□□□□ -0.13
AC004540.1-204ENST00000449537 IMMTQ16891 758 aaKnown RBP14.26□□□□□ -0.13
AC004540.1-204ENST00000449537 MIS18BP1Q6P0N0 1132 aa14.26□□□□□ -0.13
AC004540.1-204ENST00000449537 GRASPQ7Z6J2 395 aaPredicted RBP14.26□□□□□ -0.13
AC004540.1-204ENST00000449537 CCDC60Q8IWA6 550 aaPredicted RBP14.26□□□□□ -0.13
AC004540.1-204ENST00000449537 FAM160A2Q8N612 972 aaPredicted RBP14.26□□□□□ -0.13
AC004540.1-204ENST00000449537 TMEM121BQ9BXQ6 578 aaPredicted RBP14.26□□□□□ -0.13
AC004540.1-204ENST00000449537 ADAM33Q9BZ11 813 aa14.26□□□□□ -0.13
AC004540.1-204ENST00000449537 AGO4Q9HCK5 861 aaKnown RBP14.26□□□□□ -0.13
AC004540.1-204ENST00000449537 HEBP1Q9NRV9 189 aa14.26□□□□□ -0.13
AC004540.1-204ENST00000449537 RXFP3Q9NSD7 469 aa14.26□□□□□ -0.13
AC004540.1-204ENST00000449537 KANSL3Q9P2N6 904 aa14.26□□□□□ -0.13
AC004540.1-204ENST00000449537 NDRG2Q9UN36 371 aaKnown RBP14.26□□□□□ -0.13
AC004540.1-204ENST00000449537 SDK1Q7Z5N4 2213 aa14.26□□□□□ -0.13
AC004540.1-204ENST00000449537 MEIS3P2A8K0S8 358 aa14.25□□□□□ -0.13
AC004540.1-204ENST00000449537 CHURC1-FNTBB4DL54 471 aa14.25□□□□□ -0.13
AC004540.1-204ENST00000449537 MAN2B1O00754 1011 aa14.25□□□□□ -0.13
AC004540.1-204ENST00000449537 ZNF623O75123 536 aa14.25□□□□□ -0.13
AC004540.1-204ENST00000449537 CSDE1O75534 798 aaKnown RBP14.25□□□□□ -0.13
AC004540.1-204ENST00000449537 ZMYND10O75800 440 aa14.25□□□□□ -0.13
AC004540.1-204ENST00000449537 SPINK2P20155 84 aa14.25□□□□□ -0.13
AC004540.1-204ENST00000449537 FNTBP49356 437 aa14.25□□□□□ -0.13
AC004540.1-204ENST00000449537 GPC3P51654 580 aa14.25□□□□□ -0.13
AC004540.1-204ENST00000449537 UBE2SQ16763 222 aa14.25□□□□□ -0.13
AC004540.1-204ENST00000449537 LILRA6Q6PI73 481 aa14.25□□□□□ -0.13
AC004540.1-204ENST00000449537 CEP68Q76N32 757 aa14.25□□□□□ -0.13
AC004540.1-204ENST00000449537 LRRC71Q8N4P6 559 aa14.25□□□□□ -0.13
AC004540.1-204ENST00000449537 NLRP7Q8WX94 980 aa14.25□□□□□ -0.13
AC004540.1-204ENST00000449537 PGBD4Q96DM1 585 aa14.25□□□□□ -0.13
AC004540.1-204ENST00000449537 LMAN1LQ9HAT1 526 aa14.25□□□□□ -0.13
AC004540.1-204ENST00000449537 FAM105AQ9NUU6 356 aa14.25□□□□□ -0.13
AC004540.1-204ENST00000449537 SEC63Q9UGP8 760 aaKnown RBP14.25□□□□□ -0.13
AC004540.1-204ENST00000449537 AXIN1O15169 862 aa14.24□□□□□ -0.13
AC004540.1-204ENST00000449537 NCLP19338 710 aaKnown RBP14.24□□□□□ -0.13
AC004540.1-204ENST00000449537 NOVA1P51513 510 aaKnown RBP14.24□□□□□ -0.13
AC004540.1-204ENST00000449537 NTHL1P78549 312 aa14.24□□□□□ -0.13
AC004540.1-204ENST00000449537 DSG1Q02413 1049 aa14.24□□□□□ -0.13
AC004540.1-204ENST00000449537 TROAPQ12815 778 aa14.24□□□□□ -0.13
AC004540.1-204ENST00000449537 AAMPQ13685 434 aa14.24□□□□□ -0.13
AC004540.1-204ENST00000449537 CYB5R4Q7L1T6 521 aa14.24□□□□□ -0.13
AC004540.1-204ENST00000449537 LONP2Q86WA8 852 aa14.24□□□□□ -0.13
AC004540.1-204ENST00000449537 ZCCHC14Q8WYQ9 949 aaKnown RBP14.24□□□□□ -0.13
AC004540.1-204ENST00000449537 GCOM2Q9BZD3 368 aaPredicted RBP14.24□□□□□ -0.13
AC004540.1-204ENST00000449537 ARRDC1-AS1Q9H2J1 176 aa14.24□□□□□ -0.13
AC004540.1-204ENST00000449537 F5P12259 2224 aa14.23□□□□□ -0.13
AC004540.1-204ENST00000449537 SHISA7A6NL88 538 aa14.23□□□□□ -0.13
AC004540.1-204ENST00000449537 RBM25P49756 843 aaKnown RBP14.23□□□□□ -0.13
AC004540.1-204ENST00000449537 RAB27AP51159 221 aa14.23□□□□□ -0.13
AC004540.1-204ENST00000449537 SATB1Q01826 763 aa14.23□□□□□ -0.13
AC004540.1-204ENST00000449537 CEP55Q53EZ4 464 aa14.23□□□□□ -0.13
AC004540.1-204ENST00000449537 SOWAHCQ53LP3 525 aaPredicted RBP14.23□□□□□ -0.13
AC004540.1-204ENST00000449537 GLYCTKQ8IVS8 523 aa14.23□□□□□ -0.13
AC004540.1-204ENST00000449537 ZNF687Q8N1G0 1237 aa14.23□□□□□ -0.13
AC004540.1-204ENST00000449537 LINC01465Q8N7H1 131 aa14.23□□□□□ -0.13
AC004540.1-204ENST00000449537 ITFG1Q8TB96 612 aa14.23□□□□□ -0.13
AC004540.1-204ENST00000449537 GATA6Q92908 595 aa14.23□□□□□ -0.13
AC004540.1-204ENST00000449537 SPZ1Q9BXG8 430 aa14.23□□□□□ -0.13
AC004540.1-204ENST00000449537 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.23□□□□□ -0.13
AC004540.1-204ENST00000449537 WASF3Q9UPY6 502 aa14.23□□□□□ -0.13
AC004540.1-204ENST00000449537 PRG3Q9Y2Y8 225 aaPredicted RBP14.23□□□□□ -0.13
AC004540.1-204ENST00000449537 MAFBQ9Y5Q3 323 aaPredicted RBP14.23□□□□□ -0.13
AC004540.1-204ENST00000449537 GREB1Q4ZG55 1949 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms