RNA–Protein interactions for RNA: ENST00000449131.6

BEST1-202, Transcript of bestrophin 1, humanhuman

TSL 1 (best) BASIC

Gene BEST1, Length 4,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-202ENST00000449131 AGPAT1Q99943 283 aa7.66□□□□□ -1.18
BEST1-202ENST00000449131 SLITRK6Q9H5Y7 841 aa7.66□□□□□ -1.18
BEST1-202ENST00000449131 ODF2LQ9ULJ1 636 aa7.66□□□□□ -1.18
BEST1-202ENST00000449131 SCINQ9Y6U3 715 aa7.66□□□□□ -1.18
BEST1-202ENST00000449131 NALCNQ8IZF0 1738 aa7.65□□□□□ -1.18
BEST1-202ENST00000449131 WNT7AO00755 349 aa7.65□□□□□ -1.18
BEST1-202ENST00000449131 MT-ND3P03897 115 aa7.65□□□□□ -1.18
BEST1-202ENST00000449131 PSMA2P25787 234 aa7.65□□□□□ -1.18
BEST1-202ENST00000449131 FMO5P49326 533 aa7.65□□□□□ -1.18
BEST1-202ENST00000449131 PPP2R2AP63151 447 aa7.65□□□□□ -1.18
BEST1-202ENST00000449131 DALRD3Q5D0E6 543 aaKnown RBP7.65□□□□□ -1.18
BEST1-202ENST00000449131 ZNF772Q68DY9 489 aaPredicted RBP7.65□□□□□ -1.18
BEST1-202ENST00000449131 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.65□□□□□ -1.18
BEST1-202ENST00000449131 C1orf54Q8WWF1 131 aa7.65□□□□□ -1.18
BEST1-202ENST00000449131 HEXIM2Q96MH2 286 aaKnown RBP7.65□□□□□ -1.18
BEST1-202ENST00000449131 A0A1W2PQJ5 194 aa7.65□□□□□ -1.18
BEST1-202ENST00000449131 GMNCA6NCL1 334 aa7.65□□□□□ -1.18
BEST1-202ENST00000449131 RNF225M0QZC1 329 aaPredicted RBP7.65□□□□□ -1.18
BEST1-202ENST00000449131 TBX3O15119 743 aa7.65□□□□□ -1.18
BEST1-202ENST00000449131 TTI1O43156 1089 aa7.65□□□□□ -1.18
BEST1-202ENST00000449131 MED7O43513 233 aa7.65□□□□□ -1.18
BEST1-202ENST00000449131 RPA1P27694 616 aa7.65□□□□□ -1.18
BEST1-202ENST00000449131 CHRNA3P32297 505 aa7.65□□□□□ -1.18
BEST1-202ENST00000449131 SSTR3P32745 418 aaPredicted RBP7.65□□□□□ -1.18
BEST1-202ENST00000449131 SARSP49591 514 aaKnown RBP7.65□□□□□ -1.18
BEST1-202ENST00000449131 MRPS9P82933 396 aaKnown RBP7.65□□□□□ -1.18
BEST1-202ENST00000449131 IRF5Q13568 498 aa7.65□□□□□ -1.18
BEST1-202ENST00000449131 STXBP2Q15833 593 aa7.65□□□□□ -1.18
BEST1-202ENST00000449131 CDO1Q16878 200 aa7.65□□□□□ -1.18
BEST1-202ENST00000449131 MUM1Q2TAK8 710 aa7.65□□□□□ -1.18
BEST1-202ENST00000449131 MMS22LQ6ZRQ5 1243 aa7.65□□□□□ -1.18
BEST1-202ENST00000449131 BARGINQ6ZT62 677 aa7.65□□□□□ -1.18
BEST1-202ENST00000449131 CATSPER3Q86XQ3 398 aa7.65□□□□□ -1.18
BEST1-202ENST00000449131 TRIM59Q8IWR1 403 aa7.65□□□□□ -1.18
BEST1-202ENST00000449131 HACE1Q8IYU2 909 aa7.65□□□□□ -1.18
BEST1-202ENST00000449131 PDIK1LQ8N165 341 aa7.65□□□□□ -1.18
BEST1-202ENST00000449131 TMEM35BQ8NCS4 154 aa7.65□□□□□ -1.18
BEST1-202ENST00000449131 FBXL13Q8NEE6 735 aa7.65□□□□□ -1.18
BEST1-202ENST00000449131 CFAP61Q8NHU2 1237 aa7.65□□□□□ -1.18
BEST1-202ENST00000449131 NKX2-3Q8TAU0 364 aa7.65□□□□□ -1.18
BEST1-202ENST00000449131 SLC35G2Q8TBE7 412 aa7.65□□□□□ -1.18
BEST1-202ENST00000449131 PYROXD1Q8WU10 500 aa7.65□□□□□ -1.18
BEST1-202ENST00000449131 STK33Q9BYT3 514 aa7.65□□□□□ -1.18
BEST1-202ENST00000449131 RPF1Q9H9Y2 349 aaKnown RBP7.65□□□□□ -1.18
BEST1-202ENST00000449131 NGRNQ9NPE2 291 aaKnown RBP7.65□□□□□ -1.18
BEST1-202ENST00000449131 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.65□□□□□ -1.18
BEST1-202ENST00000449131 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.65□□□□□ -1.18
BEST1-202ENST00000449131 ZBTB12Q9Y330 459 aaPredicted RBP7.65□□□□□ -1.18
BEST1-202ENST00000449131 AKAP12Q02952 1782 aa7.65□□□□□ -1.19
BEST1-202ENST00000449131 CRCPO75575 148 aa7.65□□□□□ -1.19
BEST1-202ENST00000449131 BAG2O95816 211 aa7.65□□□□□ -1.19
BEST1-202ENST00000449131 SFNP31947 248 aa7.65□□□□□ -1.19
BEST1-202ENST00000449131 NFIAQ12857 509 aa7.65□□□□□ -1.19
BEST1-202ENST00000449131 ZNF667Q5HYK9 610 aa7.65□□□□□ -1.19
BEST1-202ENST00000449131 DPY19L2Q6NUT2 758 aa7.65□□□□□ -1.19
BEST1-202ENST00000449131 FAM47EQ6ZV65 393 aa7.65□□□□□ -1.19
BEST1-202ENST00000449131 CENPUQ71F23 418 aa7.65□□□□□ -1.19
BEST1-202ENST00000449131 SRRM1Q8IYB3 904 aaKnown RBP7.65□□□□□ -1.19
BEST1-202ENST00000449131 KIRREL3Q8IZU9 778 aa7.65□□□□□ -1.19
BEST1-202ENST00000449131 CCNYQ8ND76 341 aa7.65□□□□□ -1.19
BEST1-202ENST00000449131 GABPB2Q8TAK5 448 aaPredicted RBP7.65□□□□□ -1.19
BEST1-202ENST00000449131 CCHCR1Q8TD31 782 aa7.65□□□□□ -1.19
BEST1-202ENST00000449131 N4BP2L2Q92802 583 aaPredicted RBP7.65□□□□□ -1.19
BEST1-202ENST00000449131 VIPAS39Q9H9C1 493 aa7.65□□□□□ -1.19
BEST1-202ENST00000449131 ACTR5Q9H9F9 607 aaPredicted RBP7.65□□□□□ -1.19
BEST1-202ENST00000449131 KIAA1586Q9HCI6 787 aa7.65□□□□□ -1.19
BEST1-202ENST00000449131 A0A087X0T9 212 aa7.64□□□□□ -1.19
BEST1-202ENST00000449131 PHF20L1A8MW92 1017 aa7.64□□□□□ -1.19
BEST1-202ENST00000449131 PRPSAP2O60256 369 aa7.64□□□□□ -1.19
BEST1-202ENST00000449131 FAM228BP0C875 321 aa7.64□□□□□ -1.19
BEST1-202ENST00000449131 MTM1Q13496 603 aa7.64□□□□□ -1.19
BEST1-202ENST00000449131 SURF1Q15526 300 aa7.64□□□□□ -1.19
BEST1-202ENST00000449131 NAB2Q15742 525 aa7.64□□□□□ -1.19
BEST1-202ENST00000449131 SCYL3Q8IZE3 742 aa7.64□□□□□ -1.19
BEST1-202ENST00000449131 VGLL2Q8N8G2 317 aa7.64□□□□□ -1.19
BEST1-202ENST00000449131 NLRP7Q8WX94 980 aa7.64□□□□□ -1.19
BEST1-202ENST00000449131 CCT6BQ92526 530 aa7.64□□□□□ -1.19
BEST1-202ENST00000449131 CDKL2Q92772 493 aa7.64□□□□□ -1.19
BEST1-202ENST00000449131 ZIM3Q96PE6 472 aa7.64□□□□□ -1.19
BEST1-202ENST00000449131 DNAJC7Q99615 494 aa7.64□□□□□ -1.19
BEST1-202ENST00000449131 TRIM51Q9BSJ1 452 aa7.64□□□□□ -1.19
BEST1-202ENST00000449131 CELF4Q9BZC1 486 aaKnown RBP7.64□□□□□ -1.19
BEST1-202ENST00000449131 GINM1Q9NU53 330 aa7.64□□□□□ -1.19
BEST1-202ENST00000449131 APEX2Q9UBZ4 518 aa7.64□□□□□ -1.19
BEST1-202ENST00000449131 SCAF8Q9UPN6 1271 aaKnown RBP7.64□□□□□ -1.19
BEST1-202ENST00000449131 PCDHA10Q9Y5I2 948 aa7.64□□□□□ -1.19
BEST1-202ENST00000449131 KNDC1Q76NI1 1749 aa7.64□□□□□ -1.19
BEST1-202ENST00000449131 FAM187AA6NFU0 413 aa7.64□□□□□ -1.19
BEST1-202ENST00000449131 SLC16A3O15427 465 aaKnown RBP7.64□□□□□ -1.19
BEST1-202ENST00000449131 TJP3O95049 919 aa7.64□□□□□ -1.19
BEST1-202ENST00000449131 CPP00450 1065 aa7.64□□□□□ -1.19
BEST1-202ENST00000449131 CYP11B2P19099 503 aa7.64□□□□□ -1.19
BEST1-202ENST00000449131 YWHABP31946 246 aaKnown RBP7.64□□□□□ -1.19
BEST1-202ENST00000449131 GCKP35557 465 aa7.64□□□□□ -1.19
BEST1-202ENST00000449131 RCN2Q14257 317 aa7.64□□□□□ -1.19
BEST1-202ENST00000449131 MAPK6Q16659 721 aa7.64□□□□□ -1.19
BEST1-202ENST00000449131 Q3C1V9 767 aa7.64□□□□□ -1.19
BEST1-202ENST00000449131 GJB7Q6PEY0 223 aa7.64□□□□□ -1.19
BEST1-202ENST00000449131 SLC30A10Q6XR72 485 aa7.64□□□□□ -1.19
BEST1-202ENST00000449131 PDZD4Q76G19 769 aaPredicted RBP7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms