RNA–Protein interactions for RNA: ENST00000448471.2

CDK3-202, Transcript of cyclin dependent kinase 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDK3, Length 1,570 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3-202ENST00000448471 NAP1L5Q96NT1 182 aaPredicted RBP16.07■□□□□ 0.16
CDK3-202ENST00000448471 KCNF1Q9H3M0 494 aa16.07■□□□□ 0.16
CDK3-202ENST00000448471 UNC45AQ9H3U1 944 aa16.07■□□□□ 0.16
CDK3-202ENST00000448471 RNPEPQ9H4A4 650 aa16.07■□□□□ 0.16
CDK3-202ENST00000448471 TUT1Q9H6E5 874 aaKnown RBP16.07■□□□□ 0.16
CDK3-202ENST00000448471 MLXIPQ9HAP2 919 aa16.07■□□□□ 0.16
CDK3-202ENST00000448471 AGO4Q9HCK5 861 aaKnown RBP16.07■□□□□ 0.16
CDK3-202ENST00000448471 TBC1D22BQ9NU19 505 aa16.07■□□□□ 0.16
CDK3-202ENST00000448471 FRMD3A2A2Y4 597 aa16.06■□□□□ 0.16
CDK3-202ENST00000448471 DHX15O43143 795 aaKnown RBP16.06■□□□□ 0.16
CDK3-202ENST00000448471 NCK2O43639 380 aa16.06■□□□□ 0.16
CDK3-202ENST00000448471 STAM2O75886 525 aa16.06■□□□□ 0.16
CDK3-202ENST00000448471 SLITRK3O94933 977 aa16.06■□□□□ 0.16
CDK3-202ENST00000448471 LGALS2P05162 132 aa16.06■□□□□ 0.16
CDK3-202ENST00000448471 MTMR1Q13613 665 aa16.06■□□□□ 0.16
CDK3-202ENST00000448471 TTI2Q6NXR4 508 aa16.06■□□□□ 0.16
CDK3-202ENST00000448471 VSTM4Q8IW00 320 aa16.06■□□□□ 0.16
CDK3-202ENST00000448471 FIBCD1Q8N539 461 aa16.06■□□□□ 0.16
CDK3-202ENST00000448471 P2RX5Q93086 422 aa16.06■□□□□ 0.16
CDK3-202ENST00000448471 ZFP91Q96JP5 570 aaPredicted RBP16.06■□□□□ 0.16
CDK3-202ENST00000448471 ZNF830Q96NB3 372 aaPredicted RBP16.06■□□□□ 0.16
CDK3-202ENST00000448471 THAP9Q9H5L6 903 aa16.06■□□□□ 0.16
CDK3-202ENST00000448471 LIMA1Q9UHB6 759 aaKnown RBP16.06■□□□□ 0.16
CDK3-202ENST00000448471 MAPK8IP1Q9UQF2 711 aa16.06■□□□□ 0.16
CDK3-202ENST00000448471 SSBP05455 408 aaKnown RBP eCLIP16.05■□□□□ 0.16
CDK3-202ENST00000448471 TGFB3P10600 412 aa16.05■□□□□ 0.16
CDK3-202ENST00000448471 IDEP14735 1019 aa16.05■□□□□ 0.16
CDK3-202ENST00000448471 COASYQ13057 564 aa16.05■□□□□ 0.16
CDK3-202ENST00000448471 NR1I3Q14994 352 aa16.05■□□□□ 0.16
CDK3-202ENST00000448471 SMAD2Q15796 467 aaKnown RBP16.05■□□□□ 0.16
CDK3-202ENST00000448471 CLUL1Q15846 466 aa16.05■□□□□ 0.16
CDK3-202ENST00000448471 CTC1Q2NKJ3 1217 aa16.05■□□□□ 0.16
CDK3-202ENST00000448471 ARSHQ5FYA8 562 aa16.05■□□□□ 0.16
CDK3-202ENST00000448471 CENPPQ6IPU0 288 aa16.05■□□□□ 0.16
CDK3-202ENST00000448471 TMC6Q7Z403 805 aa16.05■□□□□ 0.16
CDK3-202ENST00000448471 FILIP1Q7Z7B0 1213 aa16.05■□□□□ 0.16
CDK3-202ENST00000448471 ANKRD20A12PQ8NF67 263 aa16.05■□□□□ 0.16
CDK3-202ENST00000448471 APBB2Q92870 758 aa16.05■□□□□ 0.16
CDK3-202ENST00000448471 GPRASP2Q96D09 838 aa16.05■□□□□ 0.16
CDK3-202ENST00000448471 MFSD14AQ96MC6 490 aa16.05■□□□□ 0.16
CDK3-202ENST00000448471 PANK4Q9NVE7 773 aa16.05■□□□□ 0.16
CDK3-202ENST00000448471 INTS13Q9NVM9 706 aa16.05■□□□□ 0.16
CDK3-202ENST00000448471 RGL1Q9NZL6 768 aa16.05■□□□□ 0.16
CDK3-202ENST00000448471 NLRC5Q86WI3 1866 aa16.05■□□□□ 0.16
CDK3-202ENST00000448471 C5orf67F2Z3F1 127 aa16.04■□□□□ 0.16
CDK3-202ENST00000448471 MBTPS2O43462 519 aa16.04■□□□□ 0.16
CDK3-202ENST00000448471 CYP4A11Q02928 519 aa16.04■□□□□ 0.16
CDK3-202ENST00000448471 HYAL1Q12794 435 aa16.04■□□□□ 0.16
CDK3-202ENST00000448471 FILIP1LQ4L180 1135 aa16.04■□□□□ 0.16
CDK3-202ENST00000448471 LRRC8AQ8IWT6 810 aa16.04■□□□□ 0.16
CDK3-202ENST00000448471 CCDC150Q8NCX0 1101 aa16.04■□□□□ 0.16
CDK3-202ENST00000448471 CACTINQ8WUQ7 758 aaKnown RBP16.04■□□□□ 0.16
CDK3-202ENST00000448471 DYDC2Q96IM9 177 aa16.04■□□□□ 0.16
CDK3-202ENST00000448471 INPP4AQ96PE3 977 aaPredicted RBP16.04■□□□□ 0.16
CDK3-202ENST00000448471 NACC1Q96RE7 527 aa16.04■□□□□ 0.16
CDK3-202ENST00000448471 POP1Q99575 1024 aaKnown RBP16.04■□□□□ 0.16
CDK3-202ENST00000448471 LMAN2LQ9H0V9 348 aa16.04■□□□□ 0.16
CDK3-202ENST00000448471 SLC39A2Q9NP94 309 aa16.04■□□□□ 0.16
CDK3-202ENST00000448471 MUTYHQ9UIF7 546 aa16.04■□□□□ 0.16
CDK3-202ENST00000448471 RALGAPA2Q2PPJ7 1873 aa16.04■□□□□ 0.16
CDK3-202ENST00000448471 GRM6O15303 877 aa16.04■□□□□ 0.16
CDK3-202ENST00000448471 RB1P06400 928 aa16.04■□□□□ 0.16
CDK3-202ENST00000448471 EEF1GP26641 437 aaKnown RBP16.04■□□□□ 0.16
CDK3-202ENST00000448471 PMS1P54277 932 aaKnown RBP16.04■□□□□ 0.16
CDK3-202ENST00000448471 DLX2Q07687 328 aaPredicted RBP16.04■□□□□ 0.16
CDK3-202ENST00000448471 ITGB3BPQ13352 177 aaPredicted RBP16.04■□□□□ 0.16
CDK3-202ENST00000448471 HSP90AA4PQ58FG1 418 aa16.04■□□□□ 0.16
CDK3-202ENST00000448471 HERC4Q5GLZ8 1057 aaPredicted RBP16.04■□□□□ 0.16
CDK3-202ENST00000448471 TCP11X2Q5H9J9 407 aa16.04■□□□□ 0.16
CDK3-202ENST00000448471 FAM26FQ5R3K3 315 aa16.04■□□□□ 0.16
CDK3-202ENST00000448471 NLRX1Q86UT6 975 aa16.04■□□□□ 0.16
CDK3-202ENST00000448471 DUSP9Q99956 384 aaKnown RBP16.04■□□□□ 0.16
CDK3-202ENST00000448471 C11orf84Q9BUA3 381 aaPredicted RBP16.04■□□□□ 0.16
CDK3-202ENST00000448471 BCAS3Q9H6U6 928 aa16.04■□□□□ 0.16
CDK3-202ENST00000448471 SETD4Q9NVD3 440 aa16.04■□□□□ 0.16
CDK3-202ENST00000448471 KCND2Q9NZV8 630 aa16.04■□□□□ 0.16
CDK3-202ENST00000448471 NOP56O00567 594 aaKnown RBP16.03■□□□□ 0.16
CDK3-202ENST00000448471 CHMP2AO43633 222 aa16.03■□□□□ 0.16
CDK3-202ENST00000448471 KIF20AO95235 890 aa16.03■□□□□ 0.16
CDK3-202ENST00000448471 P4HBP07237 508 aaKnown RBP16.03■□□□□ 0.16
CDK3-202ENST00000448471 LINC00271P0C7V0 271 aa16.03■□□□□ 0.16
CDK3-202ENST00000448471 GNAT1P11488 350 aa16.03■□□□□ 0.16
CDK3-202ENST00000448471 BMPR1AP36894 532 aa16.03■□□□□ 0.16
CDK3-202ENST00000448471 LRRC63Q05C16 580 aa16.03■□□□□ 0.16
CDK3-202ENST00000448471 GIT2Q14161 759 aa16.03■□□□□ 0.16
CDK3-202ENST00000448471 CTTNQ14247 550 aaKnown RBP16.03■□□□□ 0.16
CDK3-202ENST00000448471 KRT31Q15323 416 aa16.03■□□□□ 0.16
CDK3-202ENST00000448471 MIER3Q7Z3K6 550 aa16.03■□□□□ 0.16
CDK3-202ENST00000448471 IRF2BP1Q8IU81 584 aa16.03■□□□□ 0.16
CDK3-202ENST00000448471 TPH2Q8IWU9 490 aa16.03■□□□□ 0.16
CDK3-202ENST00000448471 RDM1Q8NG50 284 aa16.03■□□□□ 0.16
CDK3-202ENST00000448471 KIAA1524Q8TCG1 905 aa16.03■□□□□ 0.16
CDK3-202ENST00000448471 CDHR1Q96JP9 859 aa16.03■□□□□ 0.16
CDK3-202ENST00000448471 BHMT2Q9H2M3 363 aa16.03■□□□□ 0.16
CDK3-202ENST00000448471 RTN4Q9NQC3 1192 aaKnown RBP16.03■□□□□ 0.16
CDK3-202ENST00000448471 RWDD3Q9Y3V2 267 aa16.03■□□□□ 0.16
CDK3-202ENST00000448471 PCDHA2Q9Y5H9 948 aa16.03■□□□□ 0.16
CDK3-202ENST00000448471 ADGRA3Q8IWK6 1321 aa16.02■□□□□ 0.16
CDK3-202ENST00000448471 TRIM49BA6NDI0 452 aa16.02■□□□□ 0.16
CDK3-202ENST00000448471 KCNJ18B7U540 433 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms