RNA–Protein interactions for RNA: ENST00000448056.1

AC004540.1-206, humanhuman

TSL 3

Gene AC004540.1, Length 567 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-206ENST00000448056 OSBPL7Q9BZF2 842 aa8.33□□□□□ -1.08
AC004540.1-206ENST00000448056 PPP1R12CQ9BZL4 782 aa8.33□□□□□ -1.08
AC004540.1-206ENST00000448056 CLSTN2Q9H4D0 955 aa8.33□□□□□ -1.08
AC004540.1-206ENST00000448056 PRDM5Q9NQX1 630 aaPredicted RBP8.33□□□□□ -1.08
AC004540.1-206ENST00000448056 SEL1LQ9UBV2 794 aa8.33□□□□□ -1.08
AC004540.1-206ENST00000448056 PRKAG2Q9UGJ0 569 aa8.33□□□□□ -1.08
AC004540.1-206ENST00000448056 GINS2Q9Y248 185 aa8.33□□□□□ -1.08
AC004540.1-206ENST00000448056 PCDHA5Q9Y5H7 936 aa8.33□□□□□ -1.08
AC004540.1-206ENST00000448056 TRPV2Q9Y5S1 764 aa8.33□□□□□ -1.08
AC004540.1-206ENST00000448056 SQORQ9Y6N5 450 aa8.33□□□□□ -1.08
AC004540.1-206ENST00000448056 KAT6AQ92794 2004 aa8.32□□□□□ -1.08
AC004540.1-206ENST00000448056 TRIP12Q14669 1992 aaPredicted RBP8.32□□□□□ -1.08
AC004540.1-206ENST00000448056 LRRIQ4A6NIV6 560 aa8.32□□□□□ -1.08
AC004540.1-206ENST00000448056 SLC16A4O15374 487 aa8.32□□□□□ -1.08
AC004540.1-206ENST00000448056 TRAK2O60296 914 aa8.32□□□□□ -1.08
AC004540.1-206ENST00000448056 CSDE1O75534 798 aaKnown RBP8.32□□□□□ -1.08
AC004540.1-206ENST00000448056 SMC2O95347 1197 aa8.32□□□□□ -1.08
AC004540.1-206ENST00000448056 PARNO95453 639 aaKnown RBP8.32□□□□□ -1.08
AC004540.1-206ENST00000448056 MAPTP10636 758 aaKnown RBP8.32□□□□□ -1.08
AC004540.1-206ENST00000448056 DARSP14868 501 aaKnown RBP8.32□□□□□ -1.08
AC004540.1-206ENST00000448056 PHKA2P46019 1235 aa8.32□□□□□ -1.08
AC004540.1-206ENST00000448056 SARSP49591 514 aaKnown RBP8.32□□□□□ -1.08
AC004540.1-206ENST00000448056 EFNA5P52803 228 aa8.32□□□□□ -1.08
AC004540.1-206ENST00000448056 EHHADHQ08426 723 aa8.32□□□□□ -1.08
AC004540.1-206ENST00000448056 COASYQ13057 564 aa8.32□□□□□ -1.08
AC004540.1-206ENST00000448056 MBTPS1Q14703 1052 aa8.32□□□□□ -1.08
AC004540.1-206ENST00000448056 KMT5BQ4FZB7 885 aa8.32□□□□□ -1.08
AC004540.1-206ENST00000448056 FBXO47Q5MNV8 452 aa8.32□□□□□ -1.08
AC004540.1-206ENST00000448056 NT5DC1Q5TFE4 455 aa8.32□□□□□ -1.08
AC004540.1-206ENST00000448056 CDCA2Q69YH5 1023 aaPredicted RBP8.32□□□□□ -1.08
AC004540.1-206ENST00000448056 MFSD5Q6N075 450 aa8.32□□□□□ -1.08
AC004540.1-206ENST00000448056 ZNF720Q7Z2F6 126 aa8.32□□□□□ -1.08
AC004540.1-206ENST00000448056 SRGAP1Q7Z6B7 1085 aa8.32□□□□□ -1.08
AC004540.1-206ENST00000448056 SFR1Q86XK3 245 aa8.32□□□□□ -1.08
AC004540.1-206ENST00000448056 FAM178BQ8IXR5 827 aa8.32□□□□□ -1.08
AC004540.1-206ENST00000448056 USP38Q8NB14 1042 aa8.32□□□□□ -1.08
AC004540.1-206ENST00000448056 TMEM161BQ8NDZ6 487 aa8.32□□□□□ -1.08
AC004540.1-206ENST00000448056 DEPTORQ8TB45 409 aa8.32□□□□□ -1.08
AC004540.1-206ENST00000448056 TMEM40Q8WWA1 233 aa8.32□□□□□ -1.08
AC004540.1-206ENST00000448056 ERCC4Q92889 916 aaPredicted RBP8.32□□□□□ -1.08
AC004540.1-206ENST00000448056 HPS3Q969F9 1004 aa8.32□□□□□ -1.08
AC004540.1-206ENST00000448056 SCLT1Q96NL6 688 aa8.32□□□□□ -1.08
AC004540.1-206ENST00000448056 GSDMAQ96QA5 445 aa8.32□□□□□ -1.08
AC004540.1-206ENST00000448056 FIZ1Q96SL8 496 aa8.32□□□□□ -1.08
AC004540.1-206ENST00000448056 OSMRQ99650 979 aa8.32□□□□□ -1.08
AC004540.1-206ENST00000448056 KIFC3Q9BVG8 833 aa8.32□□□□□ -1.08
AC004540.1-206ENST00000448056 REPIN1Q9BWE0 567 aaKnown RBP8.32□□□□□ -1.08
AC004540.1-206ENST00000448056 INO80BQ9C086 356 aaPredicted RBP8.32□□□□□ -1.08
AC004540.1-206ENST00000448056 WNT8AQ9H1J5 351 aa8.32□□□□□ -1.08
AC004540.1-206ENST00000448056 C2orf40Q9H1Z8 148 aa8.32□□□□□ -1.08
AC004540.1-206ENST00000448056 MINDY3Q9H8M7 445 aa8.32□□□□□ -1.08
AC004540.1-206ENST00000448056 MRPL44Q9H9J2 332 aaKnown RBP8.32□□□□□ -1.08
AC004540.1-206ENST00000448056 KMT5AQ9NQR1 393 aa8.32□□□□□ -1.08
AC004540.1-206ENST00000448056 OLFML3Q9NRN5 406 aa8.32□□□□□ -1.08
AC004540.1-206ENST00000448056 TBC1D7Q9P0N9 293 aa8.32□□□□□ -1.08
AC004540.1-206ENST00000448056 PCDH10Q9P2E7 1040 aa8.32□□□□□ -1.08
AC004540.1-206ENST00000448056 ARHGAP28Q9P2N2 729 aa8.32□□□□□ -1.08
AC004540.1-206ENST00000448056 NR2E3Q9Y5X4 410 aa8.32□□□□□ -1.08
AC004540.1-206ENST00000448056 H0YCG3 227 aa8.31□□□□□ -1.08
AC004540.1-206ENST00000448056 K7ERI5 159 aa8.31□□□□□ -1.08
AC004540.1-206ENST00000448056 GPR182O15218 404 aa8.31□□□□□ -1.08
AC004540.1-206ENST00000448056 NBNO60934 754 aa8.31□□□□□ -1.08
AC004540.1-206ENST00000448056 RHOBTB3O94955 611 aa8.31□□□□□ -1.08
AC004540.1-206ENST00000448056 CXCL10P02778 98 aa8.31□□□□□ -1.08
AC004540.1-206ENST00000448056 GHRP10912 638 aa8.31□□□□□ -1.08
AC004540.1-206ENST00000448056 SYN1P17600 705 aa8.31□□□□□ -1.08
AC004540.1-206ENST00000448056 SCP2P22307 547 aa8.31□□□□□ -1.08
AC004540.1-206ENST00000448056 DNAJB2P25686 324 aa8.31□□□□□ -1.08
AC004540.1-206ENST00000448056 NMT1P30419 496 aaKnown RBP8.31□□□□□ -1.08
AC004540.1-206ENST00000448056 RFC2P35250 354 aa8.31□□□□□ -1.08
AC004540.1-206ENST00000448056 NCKAP1LP55160 1127 aa8.31□□□□□ -1.08
AC004540.1-206ENST00000448056 GTF2BQ00403 316 aa8.31□□□□□ -1.08
AC004540.1-206ENST00000448056 MLLT1Q03111 559 aaPredicted RBP8.31□□□□□ -1.08
AC004540.1-206ENST00000448056 MBTD1Q05BQ5 628 aa8.31□□□□□ -1.08
AC004540.1-206ENST00000448056 PSMD2Q13200 908 aa8.31□□□□□ -1.08
AC004540.1-206ENST00000448056 LPIN1Q14693 890 aa8.31□□□□□ -1.08
AC004540.1-206ENST00000448056 KCNB1Q14721 858 aa8.31□□□□□ -1.08
AC004540.1-206ENST00000448056 PCBP1Q15365 356 aaKnown RBP eCLIP8.31□□□□□ -1.08
AC004540.1-206ENST00000448056 KLHL40Q2TBA0 621 aa8.31□□□□□ -1.08
AC004540.1-206ENST00000448056 SKOR2Q2VWA4 1001 aaPredicted RBP8.31□□□□□ -1.08
AC004540.1-206ENST00000448056 TSHZ1Q6ZSZ6 1077 aa8.31□□□□□ -1.08
AC004540.1-206ENST00000448056 HAUS6Q7Z4H7 955 aa8.31□□□□□ -1.08
AC004540.1-206ENST00000448056 ZBTB8OSQ8IWT0 167 aa8.31□□□□□ -1.08
AC004540.1-206ENST00000448056 TMEM199Q8N511 208 aa8.31□□□□□ -1.08
AC004540.1-206ENST00000448056 SLC17A8Q8NDX2 589 aa8.31□□□□□ -1.08
AC004540.1-206ENST00000448056 BADQ92934 168 aa8.31□□□□□ -1.08
AC004540.1-206ENST00000448056 KCNN1Q92952 543 aa8.31□□□□□ -1.08
AC004540.1-206ENST00000448056 SMARCE1Q969G3 411 aa8.31□□□□□ -1.08
AC004540.1-206ENST00000448056 CCDC47Q96A33 483 aaKnown RBP8.31□□□□□ -1.08
AC004540.1-206ENST00000448056 SCLYQ96I15 445 aa8.31□□□□□ -1.08
AC004540.1-206ENST00000448056 STRA6Q9BX79 667 aa8.31□□□□□ -1.08
AC004540.1-206ENST00000448056 NUP62CLQ9H1M0 184 aa8.31□□□□□ -1.08
AC004540.1-206ENST00000448056 FZD8Q9H461 694 aa8.31□□□□□ -1.08
AC004540.1-206ENST00000448056 ST6GALNAC4Q9H4F1 302 aa8.31□□□□□ -1.08
AC004540.1-206ENST00000448056 TMEM134Q9H6X4 195 aa8.31□□□□□ -1.08
AC004540.1-206ENST00000448056 AGO3Q9H9G7 860 aaKnown RBP8.31□□□□□ -1.08
AC004540.1-206ENST00000448056 SLC39A2Q9NP94 309 aa8.31□□□□□ -1.08
AC004540.1-206ENST00000448056 EXOC1Q9NV70 894 aa8.31□□□□□ -1.08
AC004540.1-206ENST00000448056 ST3GAL5Q9UNP4 418 aa8.31□□□□□ -1.08
AC004540.1-206ENST00000448056 NOC2LQ9Y3T9 749 aaKnown RBP8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms