RNA–Protein interactions for RNA: ENST00000446312.5

DDR1-238, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 5 BASIC

Gene DDR1, Length 3,202 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-238	ENST00000446312	KYNU	Q16719	465 aa		13.5	□□□□□ -0.25
DDR1-238	ENST00000446312	CCDC137	Q6PK04	289 aa	Known RBP	13.5	□□□□□ -0.25
DDR1-238	ENST00000446312	ZNF572	Q7Z3I7	529 aa	Predicted RBP	13.5	□□□□□ -0.25
DDR1-238	ENST00000446312	PASD1	Q8IV76	773 aa		13.5	□□□□□ -0.25
DDR1-238	ENST00000446312	CCDC50	Q8IVM0	306 aa		13.5	□□□□□ -0.25
DDR1-238	ENST00000446312	CPXCR1	Q8N123	301 aa		13.5	□□□□□ -0.25
DDR1-238	ENST00000446312	NEK9	Q8TD19	979 aa		13.5	□□□□□ -0.25
DDR1-238	ENST00000446312	RSRC1	Q96IZ7	334 aa	Known RBP	13.5	□□□□□ -0.25
DDR1-238	ENST00000446312	YIPF3	Q9GZM5	350 aa		13.5	□□□□□ -0.25
DDR1-238	ENST00000446312	INTS2	Q9H0H0	1204 aa	Known RBP	13.5	□□□□□ -0.25
DDR1-238	ENST00000446312	WRAP73	Q9P2S5	460 aa	Predicted RBP	13.5	□□□□□ -0.25
DDR1-238	ENST00000446312	TTC7A	Q9ULT0	858 aa	Predicted RBP	13.5	□□□□□ -0.25
DDR1-238	ENST00000446312	EMSY	Q7Z589	1322 aa		13.49	□□□□□ -0.25
DDR1-238	ENST00000446312	GOLGA6L10	A0A0M3HER8	536 aa		13.49	□□□□□ -0.25
DDR1-238	ENST00000446312	CLRN2	A0PK11	232 aa		13.49	□□□□□ -0.25
DDR1-238	ENST00000446312	MEIS2	O14770	477 aa		13.49	□□□□□ -0.25
DDR1-238	ENST00000446312	RPS6KA4	O75676	772 aa		13.49	□□□□□ -0.25
DDR1-238	ENST00000446312	TRIM37	O94972	964 aa		13.49	□□□□□ -0.25
DDR1-238	ENST00000446312	GH2	P01242	217 aa		13.49	□□□□□ -0.25
DDR1-238	ENST00000446312	KRT5	P13647	590 aa		13.49	□□□□□ -0.25
DDR1-238	ENST00000446312	ICA1	Q05084	483 aa		13.49	□□□□□ -0.25
DDR1-238	ENST00000446312	IFI16	Q16666	785 aa	Known RBP	13.49	□□□□□ -0.25
DDR1-238	ENST00000446312	CERKL	Q49MI3	558 aa	Predicted RBP	13.49	□□□□□ -0.25
DDR1-238	ENST00000446312	THEMIS2	Q5TEJ8	643 aa		13.49	□□□□□ -0.25
DDR1-238	ENST00000446312	C3orf20	Q8ND61	904 aa		13.49	□□□□□ -0.25
DDR1-238	ENST00000446312	CBWD1	Q9BRT8	395 aa		13.49	□□□□□ -0.25
DDR1-238	ENST00000446312	A1CF	Q9NQ94	594 aa	Known RBP	13.49	□□□□□ -0.25
DDR1-238	ENST00000446312	SAMD15	Q9P1V8	674 aa		13.49	□□□□□ -0.25
DDR1-238	ENST00000446312	ARAP2	Q8WZ64	1704 aa		13.49	□□□□□ -0.25
DDR1-238	ENST00000446312	DOCK2	Q92608	1830 aa		13.49	□□□□□ -0.25
DDR1-238	ENST00000446312		F5H6K3	240 aa		13.49	□□□□□ -0.25
DDR1-238	ENST00000446312	SERPINB2	P05120	415 aa		13.49	□□□□□ -0.25
DDR1-238	ENST00000446312	SOX5	P35711	763 aa		13.49	□□□□□ -0.25
DDR1-238	ENST00000446312	FMO5	P49326	533 aa		13.49	□□□□□ -0.25
DDR1-238	ENST00000446312	MYL7	Q01449	175 aa		13.49	□□□□□ -0.25
DDR1-238	ENST00000446312	KLRC3	Q07444	240 aa		13.49	□□□□□ -0.25
DDR1-238	ENST00000446312	KIAA1755	Q5JYT7	1200 aa		13.49	□□□□□ -0.25
DDR1-238	ENST00000446312	MFSD4B	Q5TF39	518 aa		13.49	□□□□□ -0.25
DDR1-238	ENST00000446312	KAZN	Q674X7	775 aa		13.49	□□□□□ -0.25
DDR1-238	ENST00000446312	RINT1	Q6NUQ1	792 aa		13.49	□□□□□ -0.25
DDR1-238	ENST00000446312	ERP44	Q9BS26	406 aa		13.49	□□□□□ -0.25
DDR1-238	ENST00000446312	ALG13	Q9NP73	1137 aa	Known RBP	13.49	□□□□□ -0.25
DDR1-238	ENST00000446312	RNF14	Q9UBS8	474 aa		13.49	□□□□□ -0.25
DDR1-238	ENST00000446312	MYH7B	A7E2Y1	1941 aa		13.49	□□□□□ -0.25
DDR1-238	ENST00000446312		K7ENM7	598 aa		13.49	□□□□□ -0.25
DDR1-238	ENST00000446312	TOM1	O60784	492 aa		13.49	□□□□□ -0.25
DDR1-238	ENST00000446312	GNA14	O95837	355 aa		13.49	□□□□□ -0.25
DDR1-238	ENST00000446312	SETSIP	P0DME0	302 aa		13.49	□□□□□ -0.25
DDR1-238	ENST00000446312	USP4	Q13107	963 aa		13.49	□□□□□ -0.25
DDR1-238	ENST00000446312	DGKZ	Q13574	1117 aa		13.49	□□□□□ -0.25
DDR1-238	ENST00000446312	PPP4R3A	Q6IN85	833 aa		13.49	□□□□□ -0.25
DDR1-238	ENST00000446312	MIGA2	Q7L4E1	593 aa		13.49	□□□□□ -0.25
DDR1-238	ENST00000446312	FBXO11	Q86XK2	927 aa		13.49	□□□□□ -0.25
DDR1-238	ENST00000446312	SRRM1	Q8IYB3	904 aa	Known RBP	13.49	□□□□□ -0.25
DDR1-238	ENST00000446312	ERMN	Q8TAM6	284 aa		13.49	□□□□□ -0.25
DDR1-238	ENST00000446312	LMBR1	Q8WVP7	490 aa		13.49	□□□□□ -0.25
DDR1-238	ENST00000446312	SPOCK2	Q92563	424 aa		13.49	□□□□□ -0.25
DDR1-238	ENST00000446312	FBXO28	Q9NVF7	368 aa		13.49	□□□□□ -0.25
DDR1-238	ENST00000446312	FRMD4B	Q9Y2L6	1034 aa		13.49	□□□□□ -0.25
DDR1-238	ENST00000446312	ANKRD33B	A6NCL7	494 aa		13.48	□□□□□ -0.25
DDR1-238	ENST00000446312	HLA-DOA	P06340	250 aa		13.48	□□□□□ -0.25
DDR1-238	ENST00000446312	CHKA	P35790	457 aa		13.48	□□□□□ -0.25
DDR1-238	ENST00000446312	SMTN	P53814	917 aa		13.48	□□□□□ -0.25
DDR1-238	ENST00000446312	SLC10A5	Q5PT55	438 aa		13.48	□□□□□ -0.25
DDR1-238	ENST00000446312	HS2ST1	Q7LGA3	356 aa		13.48	□□□□□ -0.25
DDR1-238	ENST00000446312	TDRD3	Q9H7E2	651 aa	Known RBP	13.48	□□□□□ -0.25
DDR1-238	ENST00000446312	TMEM165	Q9HC07	324 aa		13.48	□□□□□ -0.25
DDR1-238	ENST00000446312	NOD2	Q9HC29	1040 aa		13.48	□□□□□ -0.25
DDR1-238	ENST00000446312		O00370	1275 aa		13.48	□□□□□ -0.25
DDR1-238	ENST00000446312	RASGRF2	O14827	1237 aa		13.48	□□□□□ -0.25
DDR1-238	ENST00000446312	RPL13	P26373	211 aa	Known RBP	13.48	□□□□□ -0.25
DDR1-238	ENST00000446312	SLC47A2	Q86VL8	602 aa		13.48	□□□□□ -0.25
DDR1-238	ENST00000446312	ACTRT1	Q8TDG2	376 aa		13.48	□□□□□ -0.25
DDR1-238	ENST00000446312	C12orf65	Q9H3J6	166 aa	Known RBP	13.48	□□□□□ -0.25
DDR1-238	ENST00000446312	DNAJC18	Q9H819	358 aa		13.48	□□□□□ -0.25
DDR1-238	ENST00000446312	C10orf88	Q9H8K7	445 aa		13.48	□□□□□ -0.25
DDR1-238	ENST00000446312	CHCHD3	Q9NX63	227 aa	Known RBP	13.48	□□□□□ -0.25
DDR1-238	ENST00000446312	TMEM59L	Q9UK28	342 aa		13.48	□□□□□ -0.25
DDR1-238	ENST00000446312	PLCH1	Q4KWH8	1693 aa		13.48	□□□□□ -0.25
DDR1-238	ENST00000446312	ROBO1	Q9Y6N7	1651 aa		13.48	□□□□□ -0.25
DDR1-238	ENST00000446312	WNK3	Q9BYP7	1800 aa		13.48	□□□□□ -0.25
DDR1-238	ENST00000446312		A0A1B0GUL6	1792 aa		13.48	□□□□□ -0.25
DDR1-238	ENST00000446312	KDM3A	Q9Y4C1	1321 aa		13.47	□□□□□ -0.25
DDR1-238	ENST00000446312	PHLPP1	O60346	1717 aa		13.47	□□□□□ -0.25
DDR1-238	ENST00000446312	DIAPH2	O60879	1101 aa		13.47	□□□□□ -0.25
DDR1-238	ENST00000446312	PECAM1	P16284	738 aa	Predicted RBP	13.47	□□□□□ -0.25
DDR1-238	ENST00000446312	SESN3	P58005	492 aa		13.47	□□□□□ -0.25
DDR1-238	ENST00000446312	PDCD2	Q16342	344 aa	Predicted RBP	13.47	□□□□□ -0.25
DDR1-238	ENST00000446312	ZNF449	Q6P9G9	518 aa		13.47	□□□□□ -0.25
DDR1-238	ENST00000446312	RFX8	Q6ZV50	586 aa		13.47	□□□□□ -0.25
DDR1-238	ENST00000446312	SUPT20H	Q8NEM7	779 aa		13.47	□□□□□ -0.25
DDR1-238	ENST00000446312	TCP10L2	B9ZVM9	353 aa		13.47	□□□□□ -0.25
DDR1-238	ENST00000446312	GOLGA8S	H3BPF8	625 aa		13.47	□□□□□ -0.25
DDR1-238	ENST00000446312	GOLGA8M	H3BSY2	632 aa		13.47	□□□□□ -0.25
DDR1-238	ENST00000446312	DDX3Y	O15523	660 aa	Known RBP	13.47	□□□□□ -0.25
DDR1-238	ENST00000446312	RASSF9	O75901	435 aa		13.47	□□□□□ -0.25
DDR1-238	ENST00000446312	AR	P10275	920 aa		13.47	□□□□□ -0.25
DDR1-238	ENST00000446312	PSMC2	P35998	433 aa	Known RBP	13.47	□□□□□ -0.25
DDR1-238	ENST00000446312	C6orf89	Q6UWU4	347 aa		13.47	□□□□□ -0.25
DDR1-238	ENST00000446312	PRELID2	Q8N945	189 aa		13.47	□□□□□ -0.25

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