RNA–Protein interactions for RNA: ENST00000445220.5

SHANK3-203, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK3, Length 5,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-203ENST00000445220 TTC7AQ9ULT0 858 aaPredicted RBP19.79■□□□□ 0.76
SHANK3-203ENST00000445220 MAGED2Q9UNF1 606 aaPredicted RBP19.79■□□□□ 0.76
SHANK3-203ENST00000445220 PNMA6FA0A0J9YX94 578 aa19.78■□□□□ 0.76
SHANK3-203ENST00000445220 VHLP40337 213 aa19.78■□□□□ 0.76
SHANK3-203ENST00000445220 TFDP2Q14188 446 aa19.78■□□□□ 0.76
SHANK3-203ENST00000445220 KIAA1755Q5JYT7 1200 aa19.78■□□□□ 0.76
SHANK3-203ENST00000445220 EPHA10Q5JZY3 1008 aa19.78■□□□□ 0.76
SHANK3-203ENST00000445220 ZBED8Q8IZ13 594 aa19.78■□□□□ 0.76
SHANK3-203ENST00000445220 BBS5Q8N3I7 341 aa19.78■□□□□ 0.76
SHANK3-203ENST00000445220 NCLNQ969V3 563 aa19.78■□□□□ 0.76
SHANK3-203ENST00000445220 ADAM22Q9P0K1 906 aa19.78■□□□□ 0.76
SHANK3-203ENST00000445220 KIF2BQ8N4N8 673 aa19.78■□□□□ 0.76
SHANK3-203ENST00000445220 VPS11Q9H270 941 aa19.78■□□□□ 0.76
SHANK3-203ENST00000445220 SUGCTQ9HAC7 445 aa19.78■□□□□ 0.76
SHANK3-203ENST00000445220 TULP4Q9NRJ4 1543 aa19.78■□□□□ 0.76
SHANK3-203ENST00000445220 PFASO15067 1338 aa19.78■□□□□ 0.76
SHANK3-203ENST00000445220 PSMD14O00487 310 aa19.78■□□□□ 0.76
SHANK3-203ENST00000445220 CDH16O75309 829 aa19.78■□□□□ 0.76
SHANK3-203ENST00000445220 NPR1P16066 1061 aa19.78■□□□□ 0.76
SHANK3-203ENST00000445220 SKOR1P84550 965 aa19.78■□□□□ 0.76
SHANK3-203ENST00000445220 ZNF564Q8TBZ8 553 aaPredicted RBP19.78■□□□□ 0.76
SHANK3-203ENST00000445220 SKA2Q8WVK7 121 aaPredicted RBP19.78■□□□□ 0.76
SHANK3-203ENST00000445220 RNPC3Q96LT9 517 aaKnown RBP19.78■□□□□ 0.76
SHANK3-203ENST00000445220 CDC42BPBQ9Y5S2 1711 aa19.78■□□□□ 0.76
SHANK3-203ENST00000445220 CROCC2H7BZ55 1655 aa19.78■□□□□ 0.76
SHANK3-203ENST00000445220 GOLGA8MH3BSY2 632 aa19.78■□□□□ 0.76
SHANK3-203ENST00000445220 CDK8P49336 464 aa19.78■□□□□ 0.76
SHANK3-203ENST00000445220 YWHAHQ04917 246 aaPredicted RBP19.78■□□□□ 0.76
SHANK3-203ENST00000445220 KDSRQ06136 332 aa19.78■□□□□ 0.76
SHANK3-203ENST00000445220 OR6B2Q6IFH4 312 aa19.78■□□□□ 0.76
SHANK3-203ENST00000445220 GADL1Q6ZQY3 521 aa19.78■□□□□ 0.76
SHANK3-203ENST00000445220 TMCO5AQ8N6Q1 288 aa19.78■□□□□ 0.76
SHANK3-203ENST00000445220 SLC7A3Q8WY07 619 aa19.78■□□□□ 0.76
SHANK3-203ENST00000445220 ZWILCHQ9H900 591 aa19.78■□□□□ 0.76
SHANK3-203ENST00000445220 MAGEA13PA6NCF6 341 aa19.77■□□□□ 0.76
SHANK3-203ENST00000445220 PI4K2BG5E9Z4 385 aa19.77■□□□□ 0.76
SHANK3-203ENST00000445220 H0Y626 953 aa19.77■□□□□ 0.76
SHANK3-203ENST00000445220 TRIM16O95361 564 aa19.77■□□□□ 0.76
SHANK3-203ENST00000445220 PSMA2P25787 234 aa19.77■□□□□ 0.76
SHANK3-203ENST00000445220 NCAPG2Q86XI2 1143 aa19.77■□□□□ 0.76
SHANK3-203ENST00000445220 ADD3Q9UEY8 706 aaKnown RBP19.77■□□□□ 0.76
SHANK3-203ENST00000445220 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.77■□□□□ 0.76
SHANK3-203ENST00000445220 SETBP1Q9Y6X0 1596 aa19.77■□□□□ 0.76
SHANK3-203ENST00000445220 GFAPP14136 432 aa19.77■□□□□ 0.76
SHANK3-203ENST00000445220 IZUMO3Q5VZ72 239 aa19.77■□□□□ 0.76
SHANK3-203ENST00000445220 CCDC134Q9H6E4 229 aa19.77■□□□□ 0.76
SHANK3-203ENST00000445220 PKD2L2Q9NZM6 624 aa19.77■□□□□ 0.76
SHANK3-203ENST00000445220 ENO1P06733 434 aaKnown RBP19.77■□□□□ 0.76
SHANK3-203ENST00000445220 AARSP49588 968 aaKnown RBP eCLIP19.77■□□□□ 0.76
SHANK3-203ENST00000445220 MAP3K7CLP57077 242 aa19.77■□□□□ 0.76
SHANK3-203ENST00000445220 ERICH1Q86X53 443 aa19.77■□□□□ 0.76
SHANK3-203ENST00000445220 RHBDL2Q9NX52 303 aa19.77■□□□□ 0.76
SHANK3-203ENST00000445220 IL10P22301 178 aa19.77■□□□□ 0.75
SHANK3-203ENST00000445220 KCTD2Q14681 263 aa19.77■□□□□ 0.75
SHANK3-203ENST00000445220 ALX1Q15699 326 aa19.77■□□□□ 0.75
SHANK3-203ENST00000445220 USP17L2Q6R6M4 530 aa19.77■□□□□ 0.75
SHANK3-203ENST00000445220 SPICE1Q8N0Z3 855 aa19.77■□□□□ 0.75
SHANK3-203ENST00000445220 TC2NQ8N9U0 490 aa19.77■□□□□ 0.75
SHANK3-203ENST00000445220 ACBD5Q5T8D3 534 aaPredicted RBP19.76■□□□□ 0.75
SHANK3-203ENST00000445220 MTBPQ96DY7 904 aa19.76■□□□□ 0.75
SHANK3-203ENST00000445220 CHP1Q99653 195 aa19.76■□□□□ 0.75
SHANK3-203ENST00000445220 GTSE1Q9NYZ3 720 aa19.76■□□□□ 0.75
SHANK3-203ENST00000445220 XPOTO43592 962 aaKnown RBP19.76■□□□□ 0.75
SHANK3-203ENST00000445220 GPS1Q13098 491 aa19.76■□□□□ 0.75
SHANK3-203ENST00000445220 MAPRE2Q15555 327 aa19.76■□□□□ 0.75
SHANK3-203ENST00000445220 KDM7AQ6ZMT4 941 aa19.76■□□□□ 0.75
SHANK3-203ENST00000445220 MMGT1Q8N4V1 131 aa19.76■□□□□ 0.75
SHANK3-203ENST00000445220 NOA1Q8NC60 698 aaKnown RBP19.76■□□□□ 0.75
SHANK3-203ENST00000445220 COA7Q96BR5 231 aa19.76■□□□□ 0.75
SHANK3-203ENST00000445220 PAWRQ96IZ0 340 aaKnown RBP19.76■□□□□ 0.75
SHANK3-203ENST00000445220 POLD4Q9HCU8 107 aa19.76■□□□□ 0.75
SHANK3-203ENST00000445220 UBTFL6P0CB48 400 aaPredicted RBP19.76■□□□□ 0.75
SHANK3-203ENST00000445220 CCNA1P78396 465 aa19.76■□□□□ 0.75
SHANK3-203ENST00000445220 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP19.76■□□□□ 0.75
SHANK3-203ENST00000445220 CHCHD3Q9NX63 227 aaKnown RBP19.76■□□□□ 0.75
SHANK3-203ENST00000445220 E7ENQ6 273 aa19.76■□□□□ 0.75
SHANK3-203ENST00000445220 TLR3O15455 904 aaKnown RBP19.76■□□□□ 0.75
SHANK3-203ENST00000445220 LRRC36Q1X8D7 754 aa19.76■□□□□ 0.75
SHANK3-203ENST00000445220 NAIF1Q69YI7 327 aaPredicted RBP19.76■□□□□ 0.75
SHANK3-203ENST00000445220 METTL16Q86W50 562 aaKnown RBP19.76■□□□□ 0.75
SHANK3-203ENST00000445220 OR9Q1Q8NGQ5 310 aa19.76■□□□□ 0.75
SHANK3-203ENST00000445220 DYNLL2Q96FJ2 89 aa19.76■□□□□ 0.75
SHANK3-203ENST00000445220 NDUFA13Q9P0J0 144 aa19.76■□□□□ 0.75
SHANK3-203ENST00000445220 PLEKHG2Q9H7P9 1386 aa19.75■□□□□ 0.75
SHANK3-203ENST00000445220 CLRN2A0PK11 232 aa19.75■□□□□ 0.75
SHANK3-203ENST00000445220 KPNB1Q14974 876 aaKnown RBP19.75■□□□□ 0.75
SHANK3-203ENST00000445220 SUPT20HL1Q3ZLR7 823 aa19.75■□□□□ 0.75
SHANK3-203ENST00000445220 NUP85Q9BW27 656 aa19.75■□□□□ 0.75
SHANK3-203ENST00000445220 C10orf88Q9H8K7 445 aa19.75■□□□□ 0.75
SHANK3-203ENST00000445220 DBNDD1Q9H9R9 158 aa19.75■□□□□ 0.75
SHANK3-203ENST00000445220 SNUPNO95149 360 aaKnown RBP19.75■□□□□ 0.75
SHANK3-203ENST00000445220 NR3C1P04150 777 aa19.75■□□□□ 0.75
SHANK3-203ENST00000445220 SLC16A2P36021 539 aa19.75■□□□□ 0.75
SHANK3-203ENST00000445220 RAP1GDS1P52306 607 aa19.75■□□□□ 0.75
SHANK3-203ENST00000445220 AP3B2Q13367 1082 aa19.75■□□□□ 0.75
SHANK3-203ENST00000445220 TBC1D9BQ66K14 1250 aa19.75■□□□□ 0.75
SHANK3-203ENST00000445220 VCPKMTQ9H867 229 aa19.75■□□□□ 0.75
SHANK3-203ENST00000445220 RAD9BQ6WBX8 426 aa19.75■□□□□ 0.75
SHANK3-203ENST00000445220 GUF1Q8N442 669 aaKnown RBP19.75■□□□□ 0.75
SHANK3-203ENST00000445220 KCNK16Q96T55 309 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms