RNA–Protein interactions for RNA: ENST00000445184.1

LINC01004-201, Transcript of long intergenic non-protein coding RNA 1004, humanhuman

TSL 5 BASIC

Gene LINC01004, Length 686 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01004-201ENST00000445184 TLR9Q9NR96 1032 aa5.3□□□□□ -1.56
LINC01004-201ENST00000445184 ZNF277Q9NRM2 450 aaPredicted RBP5.3□□□□□ -1.56
LINC01004-201ENST00000445184 TOPORSQ9NS56 1045 aaPredicted RBP5.3□□□□□ -1.56
LINC01004-201ENST00000445184 C14orf119Q9NWQ9 140 aa5.3□□□□□ -1.56
LINC01004-201ENST00000445184 CEP72Q9P209 647 aa5.3□□□□□ -1.56
LINC01004-201ENST00000445184 ARHGAP20Q9P2F6 1191 aa5.3□□□□□ -1.56
LINC01004-201ENST00000445184 SRPK3Q9UPE1 567 aa5.3□□□□□ -1.56
LINC01004-201ENST00000445184 ANKRD6Q9Y2G4 727 aa5.3□□□□□ -1.56
LINC01004-201ENST00000445184 LUC7L2Q9Y383 392 aaKnown RBP5.3□□□□□ -1.56
LINC01004-201ENST00000445184 GOLGA6CA6NDK9 693 aa5.29□□□□□ -1.56
LINC01004-201ENST00000445184 GOLGA6BA6NDN3 693 aa5.29□□□□□ -1.56
LINC01004-201ENST00000445184 CLASP2O75122 1294 aaKnown RBP5.29□□□□□ -1.56
LINC01004-201ENST00000445184 NUDT3O95989 172 aa5.29□□□□□ -1.56
LINC01004-201ENST00000445184 CFBP00751 764 aa5.29□□□□□ -1.56
LINC01004-201ENST00000445184 LTFP02788 710 aa5.29□□□□□ -1.56
LINC01004-201ENST00000445184 KRT18P05783 430 aaKnown RBP5.29□□□□□ -1.56
LINC01004-201ENST00000445184 GOLGA6DP0CG33 693 aa5.29□□□□□ -1.56
LINC01004-201ENST00000445184 ITGB6P18564 788 aa5.29□□□□□ -1.56
LINC01004-201ENST00000445184 GLRBP48167 497 aa5.29□□□□□ -1.56
LINC01004-201ENST00000445184 SEC23AQ15436 765 aa5.29□□□□□ -1.56
LINC01004-201ENST00000445184 VPS72Q15906 364 aa5.29□□□□□ -1.56
LINC01004-201ENST00000445184 SKIDA1Q1XH10 827 aa5.29□□□□□ -1.56
LINC01004-201ENST00000445184 ZMAT1Q5H9K5 638 aa5.29□□□□□ -1.56
LINC01004-201ENST00000445184 GORABQ5T7V8 394 aa5.29□□□□□ -1.56
LINC01004-201ENST00000445184 ESRP1Q6NXG1 681 aaKnown RBP5.29□□□□□ -1.56
LINC01004-201ENST00000445184 OSTM1Q86WC4 334 aa5.29□□□□□ -1.56
LINC01004-201ENST00000445184 TRIM48Q8IWZ4 208 aa5.29□□□□□ -1.56
LINC01004-201ENST00000445184 TTLL11Q8NHH1 800 aa5.29□□□□□ -1.56
LINC01004-201ENST00000445184 UHMK1Q8TAS1 419 aaKnown RBP5.29□□□□□ -1.56
LINC01004-201ENST00000445184 SSH1Q8WYL5 1049 aa5.29□□□□□ -1.56
LINC01004-201ENST00000445184 ZNF764Q96H86 408 aaPredicted RBP5.29□□□□□ -1.56
LINC01004-201ENST00000445184 C16orf92Q96LL3 132 aa5.29□□□□□ -1.56
LINC01004-201ENST00000445184 POLR3GLQ9BT43 218 aa5.29□□□□□ -1.56
LINC01004-201ENST00000445184 ZDHHC5Q9C0B5 715 aa5.29□□□□□ -1.56
LINC01004-201ENST00000445184 SLC12A5Q9H2X9 1139 aa5.29□□□□□ -1.56
LINC01004-201ENST00000445184 C12orf65Q9H3J6 166 aaKnown RBP5.29□□□□□ -1.56
LINC01004-201ENST00000445184 ANLNQ9NQW6 1124 aa5.29□□□□□ -1.56
LINC01004-201ENST00000445184 DDX21Q9NR30 783 aaKnown RBP eCLIP5.29□□□□□ -1.56
LINC01004-201ENST00000445184 GOLGA6AQ9NYA3 693 aa5.29□□□□□ -1.56
LINC01004-201ENST00000445184 ASH2LQ9UBL3 628 aa5.29□□□□□ -1.56
LINC01004-201ENST00000445184 H7C1D1 291 aa5.28□□□□□ -1.56
LINC01004-201ENST00000445184 MASP2O00187 686 aa5.28□□□□□ -1.56
LINC01004-201ENST00000445184 NKRFO15226 690 aaKnown RBP eCLIP5.28□□□□□ -1.561e-6■□□□□ 10.8
LINC01004-201ENST00000445184 MT-CO1P00395 513 aa5.28□□□□□ -1.56
LINC01004-201ENST00000445184 MYBL2P10244 700 aa5.28□□□□□ -1.56
LINC01004-201ENST00000445184 SDHAP31040 664 aa5.28□□□□□ -1.56
LINC01004-201ENST00000445184 ST5P78524 1137 aa5.28□□□□□ -1.56
LINC01004-201ENST00000445184 IRF9Q00978 393 aa5.28□□□□□ -1.56
LINC01004-201ENST00000445184 FOXL1Q12952 345 aa5.28□□□□□ -1.56
LINC01004-201ENST00000445184 PDCD1Q15116 288 aa5.28□□□□□ -1.56
LINC01004-201ENST00000445184 CYP4F22Q6NT55 531 aa5.28□□□□□ -1.56
LINC01004-201ENST00000445184 CC2D1AQ6P1N0 951 aaPredicted RBP5.28□□□□□ -1.56
LINC01004-201ENST00000445184 TMPRSS6Q8IU80 811 aa5.28□□□□□ -1.56
LINC01004-201ENST00000445184 TPH2Q8IWU9 490 aa5.28□□□□□ -1.56
LINC01004-201ENST00000445184 CMIPQ8IY22 773 aa5.28□□□□□ -1.56
LINC01004-201ENST00000445184 KIAA1958Q8N8K9 716 aa5.28□□□□□ -1.56
LINC01004-201ENST00000445184 CHAMP1Q96JM3 812 aa5.28□□□□□ -1.56
LINC01004-201ENST00000445184 PSMD1Q99460 953 aa5.28□□□□□ -1.56
LINC01004-201ENST00000445184 JAM3Q9BX67 310 aa5.28□□□□□ -1.56
LINC01004-201ENST00000445184 EPB41L1Q9H4G0 881 aa5.28□□□□□ -1.56
LINC01004-201ENST00000445184 ADARB2Q9NS39 739 aaKnown RBP5.28□□□□□ -1.56
LINC01004-201ENST00000445184 CLDND1Q9NY35 253 aa5.28□□□□□ -1.56
LINC01004-201ENST00000445184 IP6K2Q9UHH9 426 aa5.28□□□□□ -1.56
LINC01004-201ENST00000445184 CUTAO60888 179 aa5.27□□□□□ -1.57
LINC01004-201ENST00000445184 H2AFYO75367 372 aaKnown RBP5.27□□□□□ -1.57
LINC01004-201ENST00000445184 PF4V1P10720 104 aa5.27□□□□□ -1.57
LINC01004-201ENST00000445184 LSP1P33241 339 aa5.27□□□□□ -1.57
LINC01004-201ENST00000445184 CYP2C19P33261 490 aa5.27□□□□□ -1.57
LINC01004-201ENST00000445184 MTNR1BP49286 362 aa5.27□□□□□ -1.57
LINC01004-201ENST00000445184 FNTBP49356 437 aa5.27□□□□□ -1.57
LINC01004-201ENST00000445184 HHEXQ03014 270 aa5.27□□□□□ -1.57
LINC01004-201ENST00000445184 BIRC2Q13490 618 aa5.27□□□□□ -1.57
LINC01004-201ENST00000445184 EPHA7Q15375 998 aa5.27□□□□□ -1.57
LINC01004-201ENST00000445184 ARHGAP36Q6ZRI8 547 aa5.27□□□□□ -1.57
LINC01004-201ENST00000445184 HDGFL2Q7Z4V5 671 aaPredicted RBP5.27□□□□□ -1.57
LINC01004-201ENST00000445184 FAM43AQ8N2R8 423 aa5.27□□□□□ -1.57
LINC01004-201ENST00000445184 SARGQ9BW04 601 aa5.27□□□□□ -1.57
LINC01004-201ENST00000445184 SLC6A20Q9NP91 592 aa5.27□□□□□ -1.57
LINC01004-201ENST00000445184 PRDM11Q9NQV5 511 aa5.27□□□□□ -1.57
LINC01004-201ENST00000445184 ACSS2Q9NR19 701 aa5.27□□□□□ -1.57
LINC01004-201ENST00000445184 CATSPERZQ9NTU4 200 aa5.27□□□□□ -1.57
LINC01004-201ENST00000445184 USP36Q9P275 1121 aaKnown RBP5.27□□□□□ -1.57
LINC01004-201ENST00000445184 NOB1Q9ULX3 412 aaKnown RBP5.27□□□□□ -1.57
LINC01004-201ENST00000445184 NR2E1Q9Y466 385 aa5.27□□□□□ -1.57
LINC01004-201ENST00000445184 WASHC2AQ641Q2 1341 aa5.26□□□□□ -1.57
LINC01004-201ENST00000445184 VSTM5A8MXK1 200 aa5.26□□□□□ -1.57
LINC01004-201ENST00000445184 KRIT1O00522 736 aa5.26□□□□□ -1.57
LINC01004-201ENST00000445184 ERC2O15083 957 aa5.26□□□□□ -1.57
LINC01004-201ENST00000445184 PLIN1O60240 522 aa5.26□□□□□ -1.57
LINC01004-201ENST00000445184 SNUPNO95149 360 aaKnown RBP5.26□□□□□ -1.57
LINC01004-201ENST00000445184 CYP17A1P05093 508 aa5.26□□□□□ -1.57
LINC01004-201ENST00000445184 ENO2P09104 434 aaPredicted RBP5.26□□□□□ -1.57
LINC01004-201ENST00000445184 VCAM1P19320 739 aa5.26□□□□□ -1.57
LINC01004-201ENST00000445184 SLC9A1P19634 815 aa5.26□□□□□ -1.57
LINC01004-201ENST00000445184 POLD1P28340 1107 aa5.26□□□□□ -1.57
LINC01004-201ENST00000445184 MSX2P35548 267 aaPredicted RBP5.26□□□□□ -1.57
LINC01004-201ENST00000445184 C21orf58P58505 322 aa5.26□□□□□ -1.57
LINC01004-201ENST00000445184 SPIRE1Q08AE8 756 aa5.26□□□□□ -1.57
LINC01004-201ENST00000445184 TCIRG1Q13488 830 aa5.26□□□□□ -1.57
LINC01004-201ENST00000445184 HDAC1Q13547 482 aaPredicted RBP5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms