RNA–Protein interactions for RNA: ENST00000444746.6

RIF1-205, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 7,897 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-205ENST00000444746 PDZD8Q8NEN9 1154 aa8.54□□□□□ -1.04
RIF1-205ENST00000444746 DDX27Q96GQ7 796 aaKnown RBP8.54□□□□□ -1.04
RIF1-205ENST00000444746 KLHL8Q9P2G9 620 aaPredicted RBP8.54□□□□□ -1.04
RIF1-205ENST00000444746 CPSF3Q9UKF6 684 aaKnown RBP8.54□□□□□ -1.04
RIF1-205ENST00000444746 AGO2Q9UKV8 859 aaKnown RBP8.54□□□□□ -1.04
RIF1-205ENST00000444746 NOC2LQ9Y3T9 749 aaKnown RBP8.54□□□□□ -1.04
RIF1-205ENST00000444746 PCDHAC2Q9Y5I4 1007 aa8.54□□□□□ -1.04
RIF1-205ENST00000444746 GGPS1O95749 300 aa8.54□□□□□ -1.04
RIF1-205ENST00000444746 GPS1Q13098 491 aa8.54□□□□□ -1.04
RIF1-205ENST00000444746 EARS2Q5JPH6 523 aaKnown RBP8.54□□□□□ -1.04
RIF1-205ENST00000444746 FAM102AQ5T9C2 384 aaPredicted RBP8.54□□□□□ -1.04
RIF1-205ENST00000444746 TMEM117Q9H0C3 514 aa8.54□□□□□ -1.04
RIF1-205ENST00000444746 HSPBP1Q9NZL4 362 aa8.54□□□□□ -1.04
RIF1-205ENST00000444746 DFFAO00273 331 aa8.54□□□□□ -1.04
RIF1-205ENST00000444746 ANXA13P27216 316 aa8.54□□□□□ -1.04
RIF1-205ENST00000444746 JAK3P52333 1124 aa8.54□□□□□ -1.04
RIF1-205ENST00000444746 SNCBQ16143 134 aa8.54□□□□□ -1.04
RIF1-205ENST00000444746 KLHL29Q96CT2 875 aa8.54□□□□□ -1.04
RIF1-205ENST00000444746 POP1Q99575 1024 aaKnown RBP8.54□□□□□ -1.04
RIF1-205ENST00000444746 MAD2L2Q9UI95 211 aa8.54□□□□□ -1.04
RIF1-205ENST00000444746 ORC4O43929 436 aa8.54□□□□□ -1.04
RIF1-205ENST00000444746 PMS2P54278 862 aa8.54□□□□□ -1.04
RIF1-205ENST00000444746 GLRA4Q5JXX5 417 aa8.54□□□□□ -1.04
RIF1-205ENST00000444746 CEP120Q8N960 986 aa8.54□□□□□ -1.04
RIF1-205ENST00000444746 FBXL5Q9UKA1 691 aa8.54□□□□□ -1.04
RIF1-205ENST00000444746 TLK1Q9UKI8 766 aa8.54□□□□□ -1.04
RIF1-205ENST00000444746 PIN4Q9Y237 131 aaKnown RBP8.54□□□□□ -1.04
RIF1-205ENST00000444746 ABCA6Q8N139 1617 aa8.54□□□□□ -1.04
RIF1-205ENST00000444746 CNTNAP5Q8WYK1 1306 aa8.54□□□□□ -1.04
RIF1-205ENST00000444746 TMEM150BA6NC51 233 aa8.54□□□□□ -1.04
RIF1-205ENST00000444746 MMEP08473 750 aa8.54□□□□□ -1.04
RIF1-205ENST00000444746 YWHAHQ04917 246 aaPredicted RBP8.54□□□□□ -1.04
RIF1-205ENST00000444746 ALX1Q15699 326 aa8.54□□□□□ -1.04
RIF1-205ENST00000444746 RC3H1Q5TC82 1133 aaKnown RBP8.54□□□□□ -1.04
RIF1-205ENST00000444746 PDCD7Q8N8D1 485 aaKnown RBP8.54□□□□□ -1.04
RIF1-205ENST00000444746 AKT1S1Q96B36 256 aa8.54□□□□□ -1.04
RIF1-205ENST00000444746 ACAD9Q9H845 621 aa8.54□□□□□ -1.04
RIF1-205ENST00000444746 AGAP1Q9UPQ3 857 aa8.54□□□□□ -1.04
RIF1-205ENST00000444746 DUSP10Q9Y6W6 482 aa8.54□□□□□ -1.04
RIF1-205ENST00000444746 CASQ2O14958 399 aaPredicted RBP8.54□□□□□ -1.04
RIF1-205ENST00000444746 CALCAP01258 141 aa8.54□□□□□ -1.04
RIF1-205ENST00000444746 HADHAP40939 763 aa8.54□□□□□ -1.04
RIF1-205ENST00000444746 KCNJ1P48048 391 aa8.54□□□□□ -1.04
RIF1-205ENST00000444746 PLCB4Q15147 1175 aa8.54□□□□□ -1.04
RIF1-205ENST00000444746 TMEM259Q4ZIN3 620 aa8.54□□□□□ -1.04
RIF1-205ENST00000444746 SGMS1Q86VZ5 419 aa8.54□□□□□ -1.04
RIF1-205ENST00000444746 TRIM9Q9C026 710 aa8.54□□□□□ -1.04
RIF1-205ENST00000444746 MRPL46Q9H2W6 279 aaKnown RBP8.54□□□□□ -1.04
RIF1-205ENST00000444746 CHD1O14646 1710 aa8.53□□□□□ -1.04
RIF1-205ENST00000444746 MADDQ8WXG6 1647 aa8.53□□□□□ -1.04
RIF1-205ENST00000444746 SUN1O94901 812 aa8.53□□□□□ -1.04
RIF1-205ENST00000444746 PRKCBP05771 671 aa8.53□□□□□ -1.04
RIF1-205ENST00000444746 PGK2P07205 417 aa8.53□□□□□ -1.04
RIF1-205ENST00000444746 DGKZQ13574 1117 aa8.53□□□□□ -1.04
RIF1-205ENST00000444746 COG2Q14746 738 aa8.53□□□□□ -1.04
RIF1-205ENST00000444746 IQCB1Q15051 598 aa8.53□□□□□ -1.04
RIF1-205ENST00000444746 LONRF1Q17RB8 773 aa8.53□□□□□ -1.04
RIF1-205ENST00000444746 GPD1LQ8N335 351 aa8.53□□□□□ -1.04
RIF1-205ENST00000444746 JPH2Q9BR39 696 aaPredicted RBP8.53□□□□□ -1.04
RIF1-205ENST00000444746 PNPLA7Q6ZV29 1317 aa8.53□□□□□ -1.04
RIF1-205ENST00000444746 KRT14P02533 472 aa8.53□□□□□ -1.04
RIF1-205ENST00000444746 DMTNQ08495 405 aa8.53□□□□□ -1.04
RIF1-205ENST00000444746 TRIM67Q6ZTA4 783 aa8.53□□□□□ -1.04
RIF1-205ENST00000444746 ZNF579Q8NAF0 562 aaKnown RBP8.53□□□□□ -1.04
RIF1-205ENST00000444746 OR6J1Q8NGC5 347 aa8.53□□□□□ -1.04
RIF1-205ENST00000444746 SLC35G2Q8TBE7 412 aa8.53□□□□□ -1.04
RIF1-205ENST00000444746 AGPAT1Q99943 283 aa8.53□□□□□ -1.04
RIF1-205ENST00000444746 SPON2Q9BUD6 331 aa8.53□□□□□ -1.04
RIF1-205ENST00000444746 SUCLA2Q9P2R7 463 aaPredicted RBP8.53□□□□□ -1.04
RIF1-205ENST00000444746 KCNG1Q9UIX4 513 aa8.53□□□□□ -1.04
RIF1-205ENST00000444746 SLC4A7Q9Y6M7 1214 aa8.53□□□□□ -1.04
RIF1-205ENST00000444746 TTI1O43156 1089 aa8.53□□□□□ -1.04
RIF1-205ENST00000444746 UNC45AQ9H3U1 944 aa8.53□□□□□ -1.04
RIF1-205ENST00000444746 MED4Q9NPJ6 270 aa8.53□□□□□ -1.04
RIF1-205ENST00000444746 TOPORSQ9NS56 1045 aaPredicted RBP8.53□□□□□ -1.04
RIF1-205ENST00000444746 IRAK4Q9NWZ3 460 aa8.53□□□□□ -1.04
RIF1-205ENST00000444746 HACL1Q9UJ83 578 aa8.53□□□□□ -1.04
RIF1-205ENST00000444746 COL9A3Q14050 684 aaPredicted RBP8.53□□□□□ -1.04
RIF1-205ENST00000444746 ANGPTL8Q6UXH0 198 aa8.53□□□□□ -1.04
RIF1-205ENST00000444746 CCNYL1Q8N7R7 359 aa8.53□□□□□ -1.04
RIF1-205ENST00000444746 PIP4K2CQ8TBX8 421 aa8.53□□□□□ -1.04
RIF1-205ENST00000444746 PSPC1Q8WXF1 523 aaKnown RBP8.53□□□□□ -1.04
RIF1-205ENST00000444746 RUSC1Q9BVN2 902 aa8.53□□□□□ -1.04
RIF1-205ENST00000444746 SNX9Q9Y5X1 595 aa8.53□□□□□ -1.04
RIF1-205ENST00000444746 RASA4BC9J798 803 aa8.53□□□□□ -1.04
RIF1-205ENST00000444746 NVLO15381 856 aaKnown RBP8.53□□□□□ -1.04
RIF1-205ENST00000444746 RASA4O43374 803 aa8.53□□□□□ -1.04
RIF1-205ENST00000444746 XPOTO43592 962 aaKnown RBP8.53□□□□□ -1.04
RIF1-205ENST00000444746 EVI5O60447 810 aa8.53□□□□□ -1.04
RIF1-205ENST00000444746 RFC1P35251 1148 aaPredicted RBP8.53□□□□□ -1.04
RIF1-205ENST00000444746 WDR72Q3MJ13 1102 aa8.53□□□□□ -1.04
RIF1-205ENST00000444746 PTF1AQ7RTS3 328 aa8.53□□□□□ -1.04
RIF1-205ENST00000444746 BBOF1Q8ND07 529 aa8.53□□□□□ -1.04
RIF1-205ENST00000444746 CDHR1Q96JP9 859 aa8.53□□□□□ -1.04
RIF1-205ENST00000444746 LRGUKQ96M69 825 aa8.53□□□□□ -1.04
RIF1-205ENST00000444746 MYO3AQ8NEV4 1616 aa8.53□□□□□ -1.04
RIF1-205ENST00000444746 PVALEFA0A1B0GWK0 134 aa8.53□□□□□ -1.04
RIF1-205ENST00000444746 KRT17Q04695 432 aa8.53□□□□□ -1.04
RIF1-205ENST00000444746 MMS22LQ6ZRQ5 1243 aa8.53□□□□□ -1.04
RIF1-205ENST00000444746 TRMT10CQ7L0Y3 403 aaKnown RBP8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms