RNA–Protein interactions for RNA: ENST00000444532.2

CCDC188-202, Transcript of coiled-coil domain containing 188, humanhuman

TSL 3

Gene CCDC188, Length 628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-202ENST00000444532 A0A1B0GUA9 196 aa20.59■□□□□ 0.89
CCDC188-202ENST00000444532 CARNS1A5YM72 827 aa20.59■□□□□ 0.89
CCDC188-202ENST00000444532 OFD1O75665 1012 aa20.59■□□□□ 0.89
CCDC188-202ENST00000444532 FGF18O76093 207 aa20.59■□□□□ 0.89
CCDC188-202ENST00000444532 EFNA5P52803 228 aa20.59■□□□□ 0.89
CCDC188-202ENST00000444532 CAMK1Q14012 370 aa20.59■□□□□ 0.89
CCDC188-202ENST00000444532 PTPAQ15257 358 aa20.59■□□□□ 0.89
CCDC188-202ENST00000444532 LONRF3Q496Y0 759 aa20.59■□□□□ 0.89
CCDC188-202ENST00000444532 NOMO2Q5JPE7 1267 aa20.59■□□□□ 0.89
CCDC188-202ENST00000444532 KCNT2Q6UVM3 1135 aa20.59■□□□□ 0.89
CCDC188-202ENST00000444532 AGMOQ6ZNB7 445 aa20.59■□□□□ 0.89
CCDC188-202ENST00000444532 C1orf186Q6ZWK4 172 aa20.59■□□□□ 0.89
CCDC188-202ENST00000444532 THNSL1Q8IYQ7 743 aa20.59■□□□□ 0.89
CCDC188-202ENST00000444532 SYT2Q8N9I0 419 aaPredicted RBP20.59■□□□□ 0.89
CCDC188-202ENST00000444532 DEPTORQ8TB45 409 aa20.59■□□□□ 0.89
CCDC188-202ENST00000444532 CALML4Q96GE6 196 aa20.59■□□□□ 0.89
CCDC188-202ENST00000444532 ZNF558Q96NG5 402 aa20.59■□□□□ 0.89
CCDC188-202ENST00000444532 ASB2Q96Q27 587 aa20.59■□□□□ 0.89
CCDC188-202ENST00000444532 DAXXQ9UER7 740 aaPredicted RBP20.59■□□□□ 0.89
CCDC188-202ENST00000444532 MEIS3P2A8K0S8 358 aa20.58■□□□□ 0.89
CCDC188-202ENST00000444532 NCK2O43639 380 aa20.58■□□□□ 0.89
CCDC188-202ENST00000444532 DNAJB1P25685 340 aa20.58■□□□□ 0.89
CCDC188-202ENST00000444532 PPM1AP35813 382 aa20.58■□□□□ 0.89
CCDC188-202ENST00000444532 PLCB3Q01970 1234 aa20.58■□□□□ 0.89
CCDC188-202ENST00000444532 MAPK6Q16659 721 aa20.58■□□□□ 0.89
CCDC188-202ENST00000444532 TMEM119Q4V9L6 283 aa20.58■□□□□ 0.89
CCDC188-202ENST00000444532 TCEAL5Q5H9L2 206 aa20.58■□□□□ 0.89
CCDC188-202ENST00000444532 TJAP1Q5JTD0 557 aa20.58■□□□□ 0.89
CCDC188-202ENST00000444532 SLC27A1Q6PCB7 646 aa20.58■□□□□ 0.89
CCDC188-202ENST00000444532 SMG8Q8ND04 991 aaKnown RBP20.58■□□□□ 0.89
CCDC188-202ENST00000444532 POF1BQ8WVV4 589 aa20.58■□□□□ 0.89
CCDC188-202ENST00000444532 SYMPKQ92797 1274 aaKnown RBP20.58■□□□□ 0.89
CCDC188-202ENST00000444532 DRC1Q96MC2 740 aa20.58■□□□□ 0.89
CCDC188-202ENST00000444532 PLIN2Q99541 437 aa20.58■□□□□ 0.89
CCDC188-202ENST00000444532 EIF2AQ9BY44 585 aaKnown RBP20.58■□□□□ 0.89
CCDC188-202ENST00000444532 RSAD1Q9HA92 442 aa20.58■□□□□ 0.89
CCDC188-202ENST00000444532 C17orf75Q9HAS0 396 aa20.58■□□□□ 0.89
CCDC188-202ENST00000444532 POLD4Q9HCU8 107 aa20.58■□□□□ 0.89
CCDC188-202ENST00000444532 KCND2Q9NZV8 630 aa20.58■□□□□ 0.89
CCDC188-202ENST00000444532 KANSL3Q9P2N6 904 aa20.58■□□□□ 0.89
CCDC188-202ENST00000444532 LZTS1Q9Y250 596 aa20.58■□□□□ 0.89
CCDC188-202ENST00000444532 IPPQ9Y573 584 aa20.58■□□□□ 0.89
CCDC188-202ENST00000444532 A0A0C4DFX4 3053 aa20.58■□□□□ 0.88
CCDC188-202ENST00000444532 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.57■□□□□ 0.88
CCDC188-202ENST00000444532 B4GALT5O43286 388 aa20.57■□□□□ 0.88
CCDC188-202ENST00000444532 HIP1RO75146 1068 aa20.57■□□□□ 0.88
CCDC188-202ENST00000444532 ITGA4P13612 1032 aa20.57■□□□□ 0.88
CCDC188-202ENST00000444532 GUCY2CP25092 1073 aa20.57■□□□□ 0.88
CCDC188-202ENST00000444532 ALDH7A1P49419 539 aaKnown RBP20.57■□□□□ 0.88
CCDC188-202ENST00000444532 FAM173BQ6P4H8 233 aa20.57■□□□□ 0.88
CCDC188-202ENST00000444532 HACE1Q8IYU2 909 aa20.57■□□□□ 0.88
CCDC188-202ENST00000444532 URGCPQ8TCY9 931 aa20.57■□□□□ 0.88
CCDC188-202ENST00000444532 RUSC1Q9BVN2 902 aa20.57■□□□□ 0.88
CCDC188-202ENST00000444532 TRIM6Q9C030 488 aaPredicted RBP20.57■□□□□ 0.88
CCDC188-202ENST00000444532 CCDC113Q9H0I3 377 aa20.57■□□□□ 0.88
CCDC188-202ENST00000444532 TBC1D13Q9NVG8 400 aa20.57■□□□□ 0.88
CCDC188-202ENST00000444532 SPG21Q9NZD8 308 aa20.57■□□□□ 0.88
CCDC188-202ENST00000444532 KCNG1Q9UIX4 513 aa20.57■□□□□ 0.88
CCDC188-202ENST00000444532 SRPRBQ9Y5M8 271 aaKnown RBP20.57■□□□□ 0.88
CCDC188-202ENST00000444532 MORC2Q9Y6X9 1032 aaPredicted RBP20.57■□□□□ 0.88
CCDC188-202ENST00000444532 ACKR2O00590 384 aa20.56■□□□□ 0.88
CCDC188-202ENST00000444532 SSBP05455 408 aaKnown RBP eCLIP20.56■□□□□ 0.88
CCDC188-202ENST00000444532 PLA2G4BP0C869 781 aa20.56■□□□□ 0.88
CCDC188-202ENST00000444532 SLC12A3P55017 1021 aa20.56■□□□□ 0.88
CCDC188-202ENST00000444532 TFF2Q03403 129 aa20.56■□□□□ 0.88
CCDC188-202ENST00000444532 KRT17Q04695 432 aa20.56■□□□□ 0.88
CCDC188-202ENST00000444532 GRIN1Q05586 938 aa20.56■□□□□ 0.88
CCDC188-202ENST00000444532 RNASELQ05823 741 aaKnown RBP20.56■□□□□ 0.88
CCDC188-202ENST00000444532 PRPF4BQ13523 1007 aaKnown RBP20.56■□□□□ 0.88
CCDC188-202ENST00000444532 PDE12Q6L8Q7 609 aaKnown RBP20.56■□□□□ 0.88
CCDC188-202ENST00000444532 DAW1Q8N136 415 aa20.56■□□□□ 0.88
CCDC188-202ENST00000444532 PPP2R3CQ969Q6 453 aa20.56■□□□□ 0.88
CCDC188-202ENST00000444532 CCSER1Q9C0I3 900 aa20.56■□□□□ 0.88
CCDC188-202ENST00000444532 PUF60Q9UHX1 559 aaKnown RBP20.56■□□□□ 0.88
CCDC188-202ENST00000444532 INPP5FQ9Y2H2 1132 aa20.56■□□□□ 0.88
CCDC188-202ENST00000444532 N4BP3O15049 544 aa20.55■□□□□ 0.88
CCDC188-202ENST00000444532 PRKCBP05771 671 aa20.55■□□□□ 0.88
CCDC188-202ENST00000444532 MARCKSP29966 332 aaPredicted RBP20.55■□□□□ 0.88
CCDC188-202ENST00000444532 NPTX2P47972 431 aa20.55■□□□□ 0.88
CCDC188-202ENST00000444532 BCAR1P56945 870 aa20.55■□□□□ 0.88
CCDC188-202ENST00000444532 COL19A1Q14993 1142 aa20.55■□□□□ 0.88
CCDC188-202ENST00000444532 MRPS27Q92552 414 aaKnown RBP20.55■□□□□ 0.88
CCDC188-202ENST00000444532 UBE2ZQ9H832 354 aaPredicted RBP20.55■□□□□ 0.88
CCDC188-202ENST00000444532 TLR9Q9NR96 1032 aa20.55■□□□□ 0.88
CCDC188-202ENST00000444532 FBXO2Q9UK22 296 aaPredicted RBP20.55■□□□□ 0.88
CCDC188-202ENST00000444532 RBM19Q9Y4C8 960 aaKnown RBP20.55■□□□□ 0.88
CCDC188-202ENST00000444532 MYH15Q9Y2K3 1946 aa20.55■□□□□ 0.88
CCDC188-202ENST00000444532 PHLPP2Q6ZVD8 1323 aa20.54■□□□□ 0.88
CCDC188-202ENST00000444532 MYH11P35749 1972 aa20.54■□□□□ 0.88
CCDC188-202ENST00000444532 CCDC169A6NNP5 214 aa20.54■□□□□ 0.88
CCDC188-202ENST00000444532 K7ERI5 159 aa20.54■□□□□ 0.88
CCDC188-202ENST00000444532 DLL1O00548 723 aa20.54■□□□□ 0.88
CCDC188-202ENST00000444532 INPPL1O15357 1258 aa20.54■□□□□ 0.88
CCDC188-202ENST00000444532 NPTXRO95502 500 aa20.54■□□□□ 0.88
CCDC188-202ENST00000444532 PEX3P56589 373 aa20.54■□□□□ 0.88
CCDC188-202ENST00000444532 CEBPZQ03701 1054 aaKnown RBP20.54■□□□□ 0.88
CCDC188-202ENST00000444532 MAPK7Q13164 816 aa20.54■□□□□ 0.88
CCDC188-202ENST00000444532 DMP1Q13316 513 aaPredicted RBP20.54■□□□□ 0.88
CCDC188-202ENST00000444532 SLC39A14Q15043 492 aa20.54■□□□□ 0.88
CCDC188-202ENST00000444532 SLC39A11Q8N1S5 342 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms