RNA–Protein interactions for RNA: ENST00000443503.6

CTDSPL-206, Transcript of CTD small phosphatase like, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-206ENST00000443503 VCX3BQ9H321 246 aa23.96■■□□□ 1.43
CTDSPL-206ENST00000443503 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.96■■□□□ 1.43
CTDSPL-206ENST00000443503 DGAT1O75907 488 aa23.96■■□□□ 1.43
CTDSPL-206ENST00000443503 GPC3P51654 580 aa23.96■■□□□ 1.43
CTDSPL-206ENST00000443503 RPS6KA2Q15349 733 aa23.96■■□□□ 1.43
CTDSPL-206ENST00000443503 ILDR1Q86SU0 546 aaPredicted RBP23.96■■□□□ 1.43
CTDSPL-206ENST00000443503 NOA1Q8NC60 698 aaKnown RBP23.96■■□□□ 1.43
CTDSPL-206ENST00000443503 SLITRK6Q9H5Y7 841 aa23.96■■□□□ 1.43
CTDSPL-206ENST00000443503 PLA2G4FQ68DD2 849 aa23.95■■□□□ 1.43
CTDSPL-206ENST00000443503 CCDC137Q6PK04 289 aaKnown RBP23.95■■□□□ 1.43
CTDSPL-206ENST00000443503 ENOSF1Q7L5Y1 443 aa23.95■■□□□ 1.43
CTDSPL-206ENST00000443503 FAM217BQ9NTX9 383 aaPredicted RBP23.95■■□□□ 1.43
CTDSPL-206ENST00000443503 KBTBD4Q9NVX7 518 aa23.95■■□□□ 1.43
CTDSPL-206ENST00000443503 STAT5BP51692 787 aa23.95■■□□□ 1.42
CTDSPL-206ENST00000443503 TTLL4Q14679 1199 aa23.95■■□□□ 1.42
CTDSPL-206ENST00000443503 METTL23Q86XA0 190 aa23.95■■□□□ 1.42
CTDSPL-206ENST00000443503 ACER1Q8TDN7 264 aa23.95■■□□□ 1.42
CTDSPL-206ENST00000443503 TNS2Q63HR2 1409 aa23.95■■□□□ 1.42
CTDSPL-206ENST00000443503 TARSL2A2RTX5 802 aaKnown RBP23.95■■□□□ 1.42
CTDSPL-206ENST00000443503 ACOT2P49753 483 aa23.95■■□□□ 1.42
CTDSPL-206ENST00000443503 SESN3P58005 492 aa23.95■■□□□ 1.42
CTDSPL-206ENST00000443503 RNF149Q8NC42 400 aa23.95■■□□□ 1.42
CTDSPL-206ENST00000443503 TMEM143Q96AN5 459 aa23.95■■□□□ 1.42
CTDSPL-206ENST00000443503 PLCD3Q8N3E9 789 aa23.95■■□□□ 1.42
CTDSPL-206ENST00000443503 PRMT6Q96LA8 375 aaPredicted RBP23.95■■□□□ 1.42
CTDSPL-206ENST00000443503 SPATA33Q96N06 139 aa23.95■■□□□ 1.42
CTDSPL-206ENST00000443503 MMEP08473 750 aa23.94■■□□□ 1.42
CTDSPL-206ENST00000443503 CYP11B2P19099 503 aa23.94■■□□□ 1.42
CTDSPL-206ENST00000443503 XKR3Q5GH77 459 aa23.94■■□□□ 1.42
CTDSPL-206ENST00000443503 RAPH1Q70E73 1250 aa23.94■■□□□ 1.42
CTDSPL-206ENST00000443503 C1orf54Q8WWF1 131 aa23.94■■□□□ 1.42
CTDSPL-206ENST00000443503 ELAC2Q9BQ52 826 aaKnown RBP23.94■■□□□ 1.42
CTDSPL-206ENST00000443503 RCN2Q14257 317 aa23.94■■□□□ 1.42
CTDSPL-206ENST00000443503 ZNF526Q8TF50 670 aaPredicted RBP23.94■■□□□ 1.42
CTDSPL-206ENST00000443503 SLC4A9Q96Q91 983 aa23.94■■□□□ 1.42
CTDSPL-206ENST00000443503 C2orf40Q9H1Z8 148 aa23.94■■□□□ 1.42
CTDSPL-206ENST00000443503 TOPORSQ9NS56 1045 aaPredicted RBP23.94■■□□□ 1.42
CTDSPL-206ENST00000443503 RNF181Q9P0P0 153 aa23.94■■□□□ 1.42
CTDSPL-206ENST00000443503 COL5A2P05997 1499 aaPredicted RBP23.94■■□□□ 1.42
CTDSPL-206ENST00000443503 NPEPPSP55786 919 aa23.94■■□□□ 1.42
CTDSPL-206ENST00000443503 PSMC1P62191 440 aaKnown RBP23.94■■□□□ 1.42
CTDSPL-206ENST00000443503 PRPSAP1Q14558 356 aa23.94■■□□□ 1.42
CTDSPL-206ENST00000443503 HEY1Q9Y5J3 304 aa23.94■■□□□ 1.42
CTDSPL-206ENST00000443503 SLC30A5Q8TAD4 765 aa23.93■■□□□ 1.42
CTDSPL-206ENST00000443503 ANKRD7Q92527 254 aa23.93■■□□□ 1.42
CTDSPL-206ENST00000443503 MXRA8Q9BRK3 442 aa23.93■■□□□ 1.42
CTDSPL-206ENST00000443503 WNT8AQ9H1J5 351 aa23.93■■□□□ 1.42
CTDSPL-206ENST00000443503 FBXL5Q9UKA1 691 aa23.93■■□□□ 1.42
CTDSPL-206ENST00000443503 PLEKP08567 350 aaPredicted RBP23.93■■□□□ 1.42
CTDSPL-206ENST00000443503 PMS2P54278 862 aa23.93■■□□□ 1.42
CTDSPL-206ENST00000443503 TFDP2Q14188 446 aa23.93■■□□□ 1.42
CTDSPL-206ENST00000443503 DUOXA2Q1HG44 320 aa23.93■■□□□ 1.42
CTDSPL-206ENST00000443503 RIT2Q99578 217 aa23.93■■□□□ 1.42
CTDSPL-206ENST00000443503 WTIPA6NIX2 430 aaPredicted RBP23.93■■□□□ 1.42
CTDSPL-206ENST00000443503 GOLGA8MH3BSY2 632 aa23.93■■□□□ 1.42
CTDSPL-206ENST00000443503 MSH4O15457 936 aa23.93■■□□□ 1.42
CTDSPL-206ENST00000443503 OATP04181 439 aa23.93■■□□□ 1.42
CTDSPL-206ENST00000443503 PLS3P13797 630 aa23.93■■□□□ 1.42
CTDSPL-206ENST00000443503 SCP2P22307 547 aa23.93■■□□□ 1.42
CTDSPL-206ENST00000443503 KLRC1P26715 233 aa23.93■■□□□ 1.42
CTDSPL-206ENST00000443503 SRRM1Q8IYB3 904 aaKnown RBP23.93■■□□□ 1.42
CTDSPL-206ENST00000443503 SCYL3Q8IZE3 742 aa23.93■■□□□ 1.42
CTDSPL-206ENST00000443503 VGLL2Q8N8G2 317 aa23.93■■□□□ 1.42
CTDSPL-206ENST00000443503 CFAP36Q96G28 342 aa23.93■■□□□ 1.42
CTDSPL-206ENST00000443503 CCDC68Q9H2F9 335 aa23.93■■□□□ 1.42
CTDSPL-206ENST00000443503 STRIP2Q9ULQ0 834 aa23.93■■□□□ 1.42
CTDSPL-206ENST00000443503 PLAGL2Q9UPG8 496 aa23.93■■□□□ 1.42
CTDSPL-206ENST00000443503 CTIFO43310 598 aaKnown RBP23.93■■□□□ 1.42
CTDSPL-206ENST00000443503 BAG2O95816 211 aa23.93■■□□□ 1.42
CTDSPL-206ENST00000443503 HDLBPQ00341 1268 aaKnown RBP23.93■■□□□ 1.42
CTDSPL-206ENST00000443503 ZNF280CQ8ND82 737 aa23.93■■□□□ 1.42
CTDSPL-206ENST00000443503 KCNH7Q9NS40 1196 aa23.93■■□□□ 1.42
CTDSPL-206ENST00000443503 ERVK-24P63145 666 aa23.92■■□□□ 1.42
CTDSPL-206ENST00000443503 TNFAIP2Q03169 654 aa23.92■■□□□ 1.42
CTDSPL-206ENST00000443503 RNASELQ05823 741 aaKnown RBP23.92■■□□□ 1.42
CTDSPL-206ENST00000443503 SNRNP35Q16560 246 aaKnown RBP23.92■■□□□ 1.42
CTDSPL-206ENST00000443503 TTI2Q6NXR4 508 aa23.92■■□□□ 1.42
CTDSPL-206ENST00000443503 PCGF5Q86SE9 256 aa23.92■■□□□ 1.42
CTDSPL-206ENST00000443503 RHOT1Q8IXI2 618 aa23.92■■□□□ 1.42
CTDSPL-206ENST00000443503 SLC35G2Q8TBE7 412 aa23.92■■□□□ 1.42
CTDSPL-206ENST00000443503 CERKQ8TCT0 537 aa23.92■■□□□ 1.42
CTDSPL-206ENST00000443503 HIBCHQ6NVY1 386 aaPredicted RBP23.92■■□□□ 1.42
CTDSPL-206ENST00000443503 DSTYKQ6XUX3 929 aa23.92■■□□□ 1.42
CTDSPL-206ENST00000443503 GOLPH3Q9H4A6 298 aa23.92■■□□□ 1.42
CTDSPL-206ENST00000443503 MLXIPLQ9NP71 852 aa23.92■■□□□ 1.42
CTDSPL-206ENST00000443503 GSTA1P08263 222 aa23.92■■□□□ 1.42
CTDSPL-206ENST00000443503 GSTA2P09210 222 aa23.92■■□□□ 1.42
CTDSPL-206ENST00000443503 MUM1Q2TAK8 710 aa23.92■■□□□ 1.42
CTDSPL-206ENST00000443503 MICAL1Q8TDZ2 1067 aa23.92■■□□□ 1.42
CTDSPL-206ENST00000443503 FAM187AA6NFU0 413 aa23.91■■□□□ 1.42
CTDSPL-206ENST00000443503 GGPS1O95749 300 aa23.91■■□□□ 1.42
CTDSPL-206ENST00000443503 EIF2AK3Q9NZJ5 1116 aaKnown RBP23.91■■□□□ 1.42
CTDSPL-206ENST00000443503 A0A1W2PQJ5 194 aa23.91■■□□□ 1.42
CTDSPL-206ENST00000443503 COL9A3Q14050 684 aaPredicted RBP23.91■■□□□ 1.42
CTDSPL-206ENST00000443503 NAB2Q15742 525 aa23.91■■□□□ 1.42
CTDSPL-206ENST00000443503 PHLDB3Q6NSJ2 640 aa23.91■■□□□ 1.42
CTDSPL-206ENST00000443503 FAF2Q96CS3 445 aa23.91■■□□□ 1.42
CTDSPL-206ENST00000443503 BEGAINQ9BUH8 593 aa23.91■■□□□ 1.42
CTDSPL-206ENST00000443503 IL17RBQ9NRM6 502 aa23.91■■□□□ 1.42
CTDSPL-206ENST00000443503 KCND2Q9NZV8 630 aa23.91■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms