RNA–Protein interactions for RNA: ENST00000443443.1

VPS50-206, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-206ENST00000443443 CEP72Q9P209 647 aa6.43□□□□□ -1.38
VPS50-206ENST00000443443 ARID4BQ4LE39 1312 aaPredicted RBP6.43□□□□□ -1.38
VPS50-206ENST00000443443 A0A087X0B3 334 aa6.42□□□□□ -1.38
VPS50-206ENST00000443443 GSG1L2A8MUP6 293 aa6.42□□□□□ -1.38
VPS50-206ENST00000443443 KDM1AO60341 852 aa6.42□□□□□ -1.38
VPS50-206ENST00000443443 NRP2O60462 931 aa6.42□□□□□ -1.38
VPS50-206ENST00000443443 STC2O76061 302 aa6.42□□□□□ -1.38
VPS50-206ENST00000443443 IPO13O94829 963 aaKnown RBP6.42□□□□□ -1.38
VPS50-206ENST00000443443 LY86O95711 162 aa6.42□□□□□ -1.38
VPS50-206ENST00000443443 PFKMP08237 780 aa6.42□□□□□ -1.38
VPS50-206ENST00000443443 CLEC2LP0C7M8 214 aa6.42□□□□□ -1.38
VPS50-206ENST00000443443 NRG3P56975 720 aa6.42□□□□□ -1.38
VPS50-206ENST00000443443 SPIDRQ14159 915 aa6.42□□□□□ -1.38
VPS50-206ENST00000443443 DDX46Q7L014 1031 aaKnown RBP6.42□□□□□ -1.38
VPS50-206ENST00000443443 CXorf67Q86X51 503 aaPredicted RBP6.42□□□□□ -1.38
VPS50-206ENST00000443443 UBE2Q2Q8WVN8 375 aa6.42□□□□□ -1.38
VPS50-206ENST00000443443 NEU4Q8WWR8 484 aaPredicted RBP6.42□□□□□ -1.38
VPS50-206ENST00000443443 SLC5A5Q92911 643 aa6.42□□□□□ -1.38
VPS50-206ENST00000443443 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.42□□□□□ -1.38
VPS50-206ENST00000443443 XDHP47989 1333 aa6.42□□□□□ -1.38
VPS50-206ENST00000443443 GOLGA6L6A8MZA4 724 aa6.41□□□□□ -1.38
VPS50-206ENST00000443443 NRP1O14786 923 aa6.41□□□□□ -1.38
VPS50-206ENST00000443443 NCLP19338 710 aaKnown RBP6.41□□□□□ -1.38
VPS50-206ENST00000443443 CASRP41180 1078 aa6.41□□□□□ -1.38
VPS50-206ENST00000443443 TGFB2P61812 414 aa6.41□□□□□ -1.38
VPS50-206ENST00000443443 PPARAQ07869 468 aa6.41□□□□□ -1.38
VPS50-206ENST00000443443 MGAT5Q09328 741 aa6.41□□□□□ -1.38
VPS50-206ENST00000443443 FAM214AQ32MH5 1076 aa6.41□□□□□ -1.38
VPS50-206ENST00000443443 CCDC62Q6P9F0 684 aa6.41□□□□□ -1.38
VPS50-206ENST00000443443 UNC5BQ8IZJ1 945 aa6.41□□□□□ -1.38
VPS50-206ENST00000443443 ST8SIA2Q92186 375 aa6.41□□□□□ -1.38
VPS50-206ENST00000443443 MNTQ99583 582 aa6.41□□□□□ -1.38
VPS50-206ENST00000443443 MAPRE3Q9UPY8 281 aa6.41□□□□□ -1.38
VPS50-206ENST00000443443 NUMBLQ9Y6R0 609 aa6.41□□□□□ -1.38
VPS50-206ENST00000443443 ENPP3O14638 875 aa6.4□□□□□ -1.38
VPS50-206ENST00000443443 MTSS1O43312 755 aa6.4□□□□□ -1.38
VPS50-206ENST00000443443 HOXA3O43365 443 aaPredicted RBP6.4□□□□□ -1.38
VPS50-206ENST00000443443 FAM20BO75063 409 aa6.4□□□□□ -1.38
VPS50-206ENST00000443443 RPS6KA4O75676 772 aa6.4□□□□□ -1.38
VPS50-206ENST00000443443 ADH4P08319 380 aa6.4□□□□□ -1.38
VPS50-206ENST00000443443 HK1P19367 917 aa6.4□□□□□ -1.38
VPS50-206ENST00000443443 MAKP20794 623 aa6.4□□□□□ -1.38
VPS50-206ENST00000443443 GPR15P49685 360 aa6.4□□□□□ -1.38
VPS50-206ENST00000443443 UBR7Q8N806 425 aa6.4□□□□□ -1.38
VPS50-206ENST00000443443 PPP1R14CQ8TAE6 165 aa6.4□□□□□ -1.38
VPS50-206ENST00000443443 ZNF483Q8TF39 744 aaPredicted RBP6.4□□□□□ -1.38
VPS50-206ENST00000443443 CLIP3Q96DZ5 547 aa6.4□□□□□ -1.38
VPS50-206ENST00000443443 CPPED1Q9BRF8 314 aaPredicted RBP6.4□□□□□ -1.38
VPS50-206ENST00000443443 FDXACB1Q9BRP7 624 aaPredicted RBP6.4□□□□□ -1.38
VPS50-206ENST00000443443 TRIM8Q9BZR9 551 aa6.4□□□□□ -1.38
VPS50-206ENST00000443443 SLKQ9H2G2 1235 aaPredicted RBP6.4□□□□□ -1.38
VPS50-206ENST00000443443 HDAC5Q9UQL6 1122 aa6.4□□□□□ -1.38
VPS50-206ENST00000443443 PPP2R3BQ9Y5P8 575 aa6.4□□□□□ -1.38
VPS50-206ENST00000443443 SUV39H1O43463 412 aa6.39□□□□□ -1.39
VPS50-206ENST00000443443 MANFP55145 182 aaKnown RBP6.39□□□□□ -1.39
VPS50-206ENST00000443443 DUSP2Q05923 314 aa6.39□□□□□ -1.39
VPS50-206ENST00000443443 STRN3Q13033 797 aa6.39□□□□□ -1.39
VPS50-206ENST00000443443 PLEKHG4Q58EX7 1191 aa6.39□□□□□ -1.39
VPS50-206ENST00000443443 FNDC7Q5VTL7 733 aa6.39□□□□□ -1.39
VPS50-206ENST00000443443 TAS1R1Q7RTX1 841 aa6.39□□□□□ -1.39
VPS50-206ENST00000443443 HDGFL2Q7Z4V5 671 aaPredicted RBP6.39□□□□□ -1.39
VPS50-206ENST00000443443 RASSF3Q86WH2 238 aa6.39□□□□□ -1.39
VPS50-206ENST00000443443 GLB1L2Q8IW92 636 aa6.39□□□□□ -1.39
VPS50-206ENST00000443443 MDGA1Q8NFP4 955 aa6.39□□□□□ -1.39
VPS50-206ENST00000443443 PRSS50Q9UI38 385 aa6.39□□□□□ -1.39
VPS50-206ENST00000443443 TBX22Q9Y458 520 aa6.39□□□□□ -1.39
VPS50-206ENST00000443443 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.38□□□□□ -1.39
VPS50-206ENST00000443443 TLDC2A0PJX2 215 aa6.38□□□□□ -1.39
VPS50-206ENST00000443443 PRAMEF4O60810 478 aa6.38□□□□□ -1.39
VPS50-206ENST00000443443 RABGGTBP53611 331 aa6.38□□□□□ -1.39
VPS50-206ENST00000443443 CT83Q5H943 113 aa6.38□□□□□ -1.39
VPS50-206ENST00000443443 APBB1IPQ7Z5R6 666 aaPredicted RBP6.38□□□□□ -1.39
VPS50-206ENST00000443443 ANKRD13AQ8IZ07 590 aa6.38□□□□□ -1.39
VPS50-206ENST00000443443 OR14C36Q8NHC7 312 aa6.38□□□□□ -1.39
VPS50-206ENST00000443443 RSAD2Q8WXG1 361 aa6.38□□□□□ -1.39
VPS50-206ENST00000443443 FAM193BQ96PV7 902 aaPredicted RBP6.38□□□□□ -1.39
VPS50-206ENST00000443443 TTC1Q99614 292 aa6.38□□□□□ -1.39
VPS50-206ENST00000443443 IFT22Q9H7X7 185 aa6.38□□□□□ -1.39
VPS50-206ENST00000443443 NEMP1O14524 444 aa6.37□□□□□ -1.39
VPS50-206ENST00000443443 SEC24DO94855 1032 aaPredicted RBP6.37□□□□□ -1.39
VPS50-206ENST00000443443 LPLP06858 475 aa6.37□□□□□ -1.39
VPS50-206ENST00000443443 ID4P47928 161 aa6.37□□□□□ -1.39
VPS50-206ENST00000443443 LGALS4P56470 323 aa6.37□□□□□ -1.39
VPS50-206ENST00000443443 SLC25A3Q00325 362 aa6.37□□□□□ -1.39
VPS50-206ENST00000443443 TOB2Q14106 344 aaPredicted RBP6.37□□□□□ -1.39
VPS50-206ENST00000443443 UBE3CQ15386 1083 aa6.37□□□□□ -1.39
VPS50-206ENST00000443443 DHCR24Q15392 516 aa6.37□□□□□ -1.39
VPS50-206ENST00000443443 CCDC178Q5BJE1 867 aa6.37□□□□□ -1.39
VPS50-206ENST00000443443 RABL3Q5HYI8 236 aa6.37□□□□□ -1.39
VPS50-206ENST00000443443 FAM83AQ86UY5 434 aa6.37□□□□□ -1.39
VPS50-206ENST00000443443 MSL3Q8N5Y2 521 aaKnown RBP6.37□□□□□ -1.39
VPS50-206ENST00000443443 IL17RAQ96F46 866 aa6.37□□□□□ -1.39
VPS50-206ENST00000443443 WNT8AQ9H1J5 351 aa6.37□□□□□ -1.39
VPS50-206ENST00000443443 NRDE2Q9H7Z3 1164 aa6.37□□□□□ -1.39
VPS50-206ENST00000443443 EVLQ9UI08 416 aaPredicted RBP6.37□□□□□ -1.39
VPS50-206ENST00000443443 TMPRSS11EQ9UL52 423 aa6.37□□□□□ -1.39
VPS50-206ENST00000443443 KLRG2A4D1S0 409 aaPredicted RBP6.36□□□□□ -1.39
VPS50-206ENST00000443443 ZEB2O60315 1214 aa6.36□□□□□ -1.39
VPS50-206ENST00000443443 DNAJC6O75061 913 aa6.36□□□□□ -1.39
VPS50-206ENST00000443443 CFBP00751 764 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms