RNA–Protein interactions for RNA: ENST00000441602.5

VPS50-205, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-205ENST00000441602 TARBP2Q15633 366 aaKnown RBP6.55□□□□□ -1.36
VPS50-205ENST00000441602 SNRNP35Q16560 246 aaKnown RBP6.55□□□□□ -1.36
VPS50-205ENST00000441602 MAPK6Q16659 721 aa6.55□□□□□ -1.36
VPS50-205ENST00000441602 WDR44Q5JSH3 913 aa6.55□□□□□ -1.36
VPS50-205ENST00000441602 KRT39Q6A163 491 aa6.55□□□□□ -1.36
VPS50-205ENST00000441602 IQCEQ6IPM2 695 aa6.55□□□□□ -1.36
VPS50-205ENST00000441602 MAMDC4Q6UXC1 1216 aa6.55□□□□□ -1.36
VPS50-205ENST00000441602 ENOSF1Q7L5Y1 443 aa6.55□□□□□ -1.36
VPS50-205ENST00000441602 RASAL3Q86YV0 1011 aa6.55□□□□□ -1.36
VPS50-205ENST00000441602 CEP112Q8N8E3 955 aa6.55□□□□□ -1.36
VPS50-205ENST00000441602 OR6J1Q8NGC5 347 aa6.55□□□□□ -1.36
VPS50-205ENST00000441602 SOCS4Q8WXH5 440 aa6.55□□□□□ -1.36
VPS50-205ENST00000441602 NT5C1BQ96P26 610 aa6.55□□□□□ -1.36
VPS50-205ENST00000441602 SH2D3AQ9BRG2 576 aa6.55□□□□□ -1.36
VPS50-205ENST00000441602 CBWD1Q9BRT8 395 aa6.55□□□□□ -1.36
VPS50-205ENST00000441602 SUGCTQ9HAC7 445 aa6.55□□□□□ -1.36
VPS50-205ENST00000441602 TMEM8AQ9HCN3 771 aa6.55□□□□□ -1.36
VPS50-205ENST00000441602 NMRK2Q9NPI5 230 aa6.55□□□□□ -1.36
VPS50-205ENST00000441602 DNAJC12Q9UKB3 198 aa6.55□□□□□ -1.36
VPS50-205ENST00000441602 RRN3P2A6NIE6 340 aa6.54□□□□□ -1.36
VPS50-205ENST00000441602 ADCY3O60266 1144 aa6.54□□□□□ -1.36
VPS50-205ENST00000441602 TRIM49P0CI25 452 aa6.54□□□□□ -1.36
VPS50-205ENST00000441602 TRIM49CP0CI26 452 aa6.54□□□□□ -1.36
VPS50-205ENST00000441602 GLRA2P23416 452 aa6.54□□□□□ -1.36
VPS50-205ENST00000441602 MFAP3P55082 362 aa6.54□□□□□ -1.36
VPS50-205ENST00000441602 NAP1L1P55209 391 aaKnown RBP6.54□□□□□ -1.36
VPS50-205ENST00000441602 CDC42EP1Q00587 391 aa6.54□□□□□ -1.36
VPS50-205ENST00000441602 MAP2K5Q13163 448 aa6.54□□□□□ -1.36
VPS50-205ENST00000441602 PLCB4Q15147 1175 aa6.54□□□□□ -1.36
VPS50-205ENST00000441602 KYAT1Q16773 422 aa6.54□□□□□ -1.36
VPS50-205ENST00000441602 WDR59Q6PJI9 974 aa6.54□□□□□ -1.36
VPS50-205ENST00000441602 TRIM58Q8NG06 486 aa6.54□□□□□ -1.36
VPS50-205ENST00000441602 PPTC7Q8NI37 304 aa6.54□□□□□ -1.36
VPS50-205ENST00000441602 EMID1Q96A84 441 aaPredicted RBP6.54□□□□□ -1.36
VPS50-205ENST00000441602 BORCS6Q96GS4 357 aa6.54□□□□□ -1.36
VPS50-205ENST00000441602 TINF2Q9BSI4 451 aa6.54□□□□□ -1.36
VPS50-205ENST00000441602 TCHPQ9BT92 498 aa6.54□□□□□ -1.36
VPS50-205ENST00000441602 IMPG2Q9BZV3 1241 aa6.54□□□□□ -1.36
VPS50-205ENST00000441602 AP5M1Q9H0R1 490 aa6.54□□□□□ -1.36
VPS50-205ENST00000441602 SUCLA2Q9P2R7 463 aaPredicted RBP6.54□□□□□ -1.36
VPS50-205ENST00000441602 TSKSQ9UJT2 592 aa6.54□□□□□ -1.36
VPS50-205ENST00000441602 AGO2Q9UKV8 859 aaKnown RBP6.54□□□□□ -1.36
VPS50-205ENST00000441602 PCDHA13Q9Y5I0 950 aa6.54□□□□□ -1.36
VPS50-205ENST00000441602 ATP8B3O60423 1300 aa6.54□□□□□ -1.36
VPS50-205ENST00000441602 RASSF10A6NK89 507 aa6.54□□□□□ -1.36
VPS50-205ENST00000441602 RNF225M0QZC1 329 aaPredicted RBP6.54□□□□□ -1.36
VPS50-205ENST00000441602 ZC3H11AO75152 810 aaKnown RBP eCLIP6.54□□□□□ -1.36
VPS50-205ENST00000441602 PPFIA4O75335 1185 aa6.54□□□□□ -1.36
VPS50-205ENST00000441602 CLSTN1O94985 981 aa6.54□□□□□ -1.36
VPS50-205ENST00000441602 SLC9A1P19634 815 aa6.54□□□□□ -1.36
VPS50-205ENST00000441602 MARK3P27448 753 aa6.54□□□□□ -1.36
VPS50-205ENST00000441602 SOX5P35711 763 aa6.54□□□□□ -1.36
VPS50-205ENST00000441602 FSTL1Q12841 308 aa6.54□□□□□ -1.36
VPS50-205ENST00000441602 SMYD5Q6GMV2 418 aa6.54□□□□□ -1.36
VPS50-205ENST00000441602 TRIM65Q6PJ69 517 aa6.54□□□□□ -1.36
VPS50-205ENST00000441602 ASAP3Q8TDY4 903 aa6.54□□□□□ -1.36
VPS50-205ENST00000441602 ZNF526Q8TF50 670 aaPredicted RBP6.54□□□□□ -1.36
VPS50-205ENST00000441602 LMBR1Q8WVP7 490 aa6.54□□□□□ -1.36
VPS50-205ENST00000441602 BSNDQ8WZ55 320 aa6.54□□□□□ -1.36
VPS50-205ENST00000441602 FGD4Q96M96 766 aa6.54□□□□□ -1.36
VPS50-205ENST00000441602 SCLT1Q96NL6 688 aa6.54□□□□□ -1.36
VPS50-205ENST00000441602 NOX5Q96PH1 765 aa6.54□□□□□ -1.36
VPS50-205ENST00000441602 MSTO1Q9BUK6 570 aa6.54□□□□□ -1.36
VPS50-205ENST00000441602 APEX2Q9UBZ4 518 aa6.54□□□□□ -1.36
VPS50-205ENST00000441602 ANO9A1A5B4 782 aa6.53□□□□□ -1.36
VPS50-205ENST00000441602 GOLGA8IPA6NC78 632 aa6.53□□□□□ -1.36
VPS50-205ENST00000441602 GOLGA8JA6NMD2 632 aa6.53□□□□□ -1.36
VPS50-205ENST00000441602 PHACTR2O75167 634 aa6.53□□□□□ -1.36
VPS50-205ENST00000441602 ALDH1A1P00352 501 aa6.53□□□□□ -1.36
VPS50-205ENST00000441602 PRKCBP05771 671 aa6.53□□□□□ -1.36
VPS50-205ENST00000441602 TNFAIP3P21580 790 aa6.53□□□□□ -1.36
VPS50-205ENST00000441602 PRKCIP41743 596 aa6.53□□□□□ -1.36
VPS50-205ENST00000441602 TNFAIP2Q03169 654 aa6.53□□□□□ -1.36
VPS50-205ENST00000441602 ARID5AQ03989 594 aa6.53□□□□□ -1.36
VPS50-205ENST00000441602 CYP24A1Q07973 514 aa6.53□□□□□ -1.36
VPS50-205ENST00000441602 ACVR2BQ13705 512 aa6.53□□□□□ -1.36
VPS50-205ENST00000441602 DGKDQ16760 1214 aa6.53□□□□□ -1.36
VPS50-205ENST00000441602 WHAMMP3Q1A5X7 153 aa6.53□□□□□ -1.36
VPS50-205ENST00000441602 DUSP28Q4G0W2 176 aa6.53□□□□□ -1.36
VPS50-205ENST00000441602 CCDC70Q6NSX1 233 aa6.53□□□□□ -1.36
VPS50-205ENST00000441602 RNF10Q8N5U6 811 aaKnown RBP6.53□□□□□ -1.36
VPS50-205ENST00000441602 CCDC155Q8N6L0 562 aa6.53□□□□□ -1.36
VPS50-205ENST00000441602 MAML3Q96JK9 1138 aa6.53□□□□□ -1.36
VPS50-205ENST00000441602 CALR3Q96L12 384 aaKnown RBP6.53□□□□□ -1.36
VPS50-205ENST00000441602 PCYT2Q99447 389 aa6.53□□□□□ -1.36
VPS50-205ENST00000441602 L2HGDHQ9H9P8 463 aa6.53□□□□□ -1.36
VPS50-205ENST00000441602 CPA4Q9UI42 421 aa6.53□□□□□ -1.36
VPS50-205ENST00000441602 FHOD1Q9Y613 1164 aa6.53□□□□□ -1.36
VPS50-205ENST00000441602 MYH11P35749 1972 aa6.53□□□□□ -1.36
VPS50-205ENST00000441602 ANKRD63C9JTQ0 380 aa6.53□□□□□ -1.36
VPS50-205ENST00000441602 ZEB2O60315 1214 aa6.53□□□□□ -1.36
VPS50-205ENST00000441602 ARIH2O95376 493 aa6.53□□□□□ -1.36
VPS50-205ENST00000441602 LGALS2P05162 132 aa6.53□□□□□ -1.36
VPS50-205ENST00000441602 SLC10A3P09131 477 aa6.53□□□□□ -1.36
VPS50-205ENST00000441602 ATP4AP20648 1035 aa6.53□□□□□ -1.36
VPS50-205ENST00000441602 POU5F1BQ06416 359 aa6.53□□□□□ -1.36
VPS50-205ENST00000441602 ARHGAP1Q07960 439 aa6.53□□□□□ -1.36
VPS50-205ENST00000441602 NCBP1Q09161 790 aaKnown RBP6.53□□□□□ -1.36
VPS50-205ENST00000441602 PSMD6Q15008 389 aa6.53□□□□□ -1.36
VPS50-205ENST00000441602 SLC18A3Q16572 532 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms