RNA–Protein interactions for RNA: ENST00000440903.1

CCDC140-202, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS ALT2 TSL 3

Gene CCDC140, Length 441 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-202ENST00000440903 NPEPPSP55786 919 aa5.49□□□□□ -1.53
CCDC140-202ENST00000440903 RTP1P59025 263 aa5.49□□□□□ -1.53
CCDC140-202ENST00000440903 STRN3Q13033 797 aa5.49□□□□□ -1.53
CCDC140-202ENST00000440903 PTK7Q13308 1070 aa5.49□□□□□ -1.53
CCDC140-202ENST00000440903 NFKBIBQ15653 356 aa5.49□□□□□ -1.53
CCDC140-202ENST00000440903 PTPRNQ16849 979 aa5.49□□□□□ -1.53
CCDC140-202ENST00000440903 CCSAPQ6IQ19 270 aaPredicted RBP5.49□□□□□ -1.53
CCDC140-202ENST00000440903 RINT1Q6NUQ1 792 aa5.49□□□□□ -1.53
CCDC140-202ENST00000440903 EFCAB12Q6NXP0 572 aa5.49□□□□□ -1.53
CCDC140-202ENST00000440903 CAVIN1Q6NZI2 390 aaKnown RBP5.49□□□□□ -1.53
CCDC140-202ENST00000440903 MTHFD1LQ6UB35 978 aa5.49□□□□□ -1.53
CCDC140-202ENST00000440903 SASS6Q6UVJ0 657 aa5.49□□□□□ -1.53
CCDC140-202ENST00000440903 FAM43BQ6ZT52 329 aaPredicted RBP5.49□□□□□ -1.53
CCDC140-202ENST00000440903 USP49Q70CQ1 688 aa5.49□□□□□ -1.53
CCDC140-202ENST00000440903 UNC13DQ70J99 1090 aa5.49□□□□□ -1.53
CCDC140-202ENST00000440903 MAEAQ7L5Y9 396 aa5.49□□□□□ -1.53
CCDC140-202ENST00000440903 DYMQ7RTS9 669 aa5.49□□□□□ -1.53
CCDC140-202ENST00000440903 ZNF410Q86VK4 478 aa5.49□□□□□ -1.53
CCDC140-202ENST00000440903 FAM178BQ8IXR5 827 aa5.49□□□□□ -1.53
CCDC140-202ENST00000440903 ELOA2Q8IYF1 753 aaPredicted RBP5.49□□□□□ -1.53
CCDC140-202ENST00000440903 FMR1NBQ8N0W7 255 aaPredicted RBP5.49□□□□□ -1.53
CCDC140-202ENST00000440903 NME8Q8N427 588 aa5.49□□□□□ -1.53
CCDC140-202ENST00000440903 MYCT1Q8N699 235 aa5.49□□□□□ -1.53
CCDC140-202ENST00000440903 TRIML1Q8N9V2 468 aa5.49□□□□□ -1.53
CCDC140-202ENST00000440903 KAT2BQ92831 832 aa5.49□□□□□ -1.53
CCDC140-202ENST00000440903 HVCN1Q96D96 273 aa5.49□□□□□ -1.53
CCDC140-202ENST00000440903 PAWRQ96IZ0 340 aaKnown RBP5.49□□□□□ -1.53
CCDC140-202ENST00000440903 NLRP4Q96MN2 994 aa5.49□□□□□ -1.53
CCDC140-202ENST00000440903 REEP2Q9BRK0 252 aa5.49□□□□□ -1.53
CCDC140-202ENST00000440903 GCOM2Q9BZD3 368 aaPredicted RBP5.49□□□□□ -1.53
CCDC140-202ENST00000440903 TRIM9Q9C026 710 aa5.49□□□□□ -1.53
CCDC140-202ENST00000440903 RNPEPQ9H4A4 650 aa5.49□□□□□ -1.53
CCDC140-202ENST00000440903 DHX33Q9H6R0 707 aaKnown RBP5.49□□□□□ -1.53
CCDC140-202ENST00000440903 BCAS3Q9H6U6 928 aa5.49□□□□□ -1.53
CCDC140-202ENST00000440903 KMT5AQ9NQR1 393 aa5.49□□□□□ -1.53
CCDC140-202ENST00000440903 PRDM5Q9NQX1 630 aaPredicted RBP5.49□□□□□ -1.53
CCDC140-202ENST00000440903 PANK4Q9NVE7 773 aa5.49□□□□□ -1.53
CCDC140-202ENST00000440903 EVA1BQ9NVM1 165 aa5.49□□□□□ -1.53
CCDC140-202ENST00000440903 KBTBD4Q9NVX7 518 aa5.49□□□□□ -1.53
CCDC140-202ENST00000440903 SUCLA2Q9P2R7 463 aaPredicted RBP5.49□□□□□ -1.53
CCDC140-202ENST00000440903 WRAP73Q9P2S5 460 aaPredicted RBP5.49□□□□□ -1.53
CCDC140-202ENST00000440903 EXOC7Q9UPT5 735 aa5.49□□□□□ -1.53
CCDC140-202ENST00000440903 PCDHA2Q9Y5H9 948 aa5.49□□□□□ -1.53
CCDC140-202ENST00000440903 TRPV2Q9Y5S1 764 aa5.49□□□□□ -1.53
CCDC140-202ENST00000440903 DOCK5Q9H7D0 1870 aa5.49□□□□□ -1.53
CCDC140-202ENST00000440903 TMEM150BA6NC51 233 aa5.48□□□□□ -1.53
CCDC140-202ENST00000440903 CCDC169A6NNP5 214 aa5.48□□□□□ -1.53
CCDC140-202ENST00000440903 PSMA7O14818 248 aa5.48□□□□□ -1.53
CCDC140-202ENST00000440903 TRAK2O60296 914 aa5.48□□□□□ -1.53
CCDC140-202ENST00000440903 ZMYND10O75800 440 aa5.48□□□□□ -1.53
CCDC140-202ENST00000440903 GCNT3O95395 438 aa5.48□□□□□ -1.53
CCDC140-202ENST00000440903 RPN1P04843 607 aaKnown RBP5.48□□□□□ -1.53
CCDC140-202ENST00000440903 CLTBP09497 229 aa5.48□□□□□ -1.53
CCDC140-202ENST00000440903 CTSHP09668 335 aa5.48□□□□□ -1.53
CCDC140-202ENST00000440903 MAPTP10636 758 aaKnown RBP5.48□□□□□ -1.53
CCDC140-202ENST00000440903 PLS3P13797 630 aa5.48□□□□□ -1.53
CCDC140-202ENST00000440903 THPOP40225 353 aa5.48□□□□□ -1.53
CCDC140-202ENST00000440903 CLCN3P51790 818 aa5.48□□□□□ -1.53
CCDC140-202ENST00000440903 SOX10P56693 466 aa5.48□□□□□ -1.53
CCDC140-202ENST00000440903 TPM4P67936 248 aa5.48□□□□□ -1.53
CCDC140-202ENST00000440903 MRPS6P82932 125 aaKnown RBP5.48□□□□□ -1.53
CCDC140-202ENST00000440903 RAD51AP2Q09MP3 1159 aa5.48□□□□□ -1.53
CCDC140-202ENST00000440903 KCNH2Q12809 1159 aa5.48□□□□□ -1.53
CCDC140-202ENST00000440903 PSMD2Q13200 908 aa5.48□□□□□ -1.53
CCDC140-202ENST00000440903 PCBP1Q15365 356 aaKnown RBP eCLIP5.48□□□□□ -1.53
CCDC140-202ENST00000440903 TARBP2Q15633 366 aaKnown RBP5.48□□□□□ -1.53
CCDC140-202ENST00000440903 ECM1Q16610 540 aa5.48□□□□□ -1.53
CCDC140-202ENST00000440903 MAPK6Q16659 721 aa5.48□□□□□ -1.53
CCDC140-202ENST00000440903 TRIM60Q495X7 471 aa5.48□□□□□ -1.53
CCDC140-202ENST00000440903 LONRF3Q496Y0 759 aa5.48□□□□□ -1.53
CCDC140-202ENST00000440903 NAALADL2Q58DX5 795 aa5.48□□□□□ -1.53
CCDC140-202ENST00000440903 HERC4Q5GLZ8 1057 aaPredicted RBP5.48□□□□□ -1.53
CCDC140-202ENST00000440903 FAM26FQ5R3K3 315 aa5.48□□□□□ -1.53
CCDC140-202ENST00000440903 C1orf53Q5VUE5 145 aa5.48□□□□□ -1.53
CCDC140-202ENST00000440903 ZNF385CQ66K41 422 aaPredicted RBP5.48□□□□□ -1.53
CCDC140-202ENST00000440903 GDF6Q6KF10 455 aaPredicted RBP5.48□□□□□ -1.53
CCDC140-202ENST00000440903 SLC39A5Q6ZMH5 540 aa5.48□□□□□ -1.53
CCDC140-202ENST00000440903 HS2ST1Q7LGA3 356 aa5.48□□□□□ -1.53
CCDC140-202ENST00000440903 KCNK18Q7Z418 384 aa5.48□□□□□ -1.53
CCDC140-202ENST00000440903 SERINC5Q86VE9 423 aa5.48□□□□□ -1.53
CCDC140-202ENST00000440903 RHPN2Q8IUC4 686 aa5.48□□□□□ -1.53
CCDC140-202ENST00000440903 HACE1Q8IYU2 909 aa5.48□□□□□ -1.53
CCDC140-202ENST00000440903 SYCP3Q8IZU3 236 aa5.48□□□□□ -1.53
CCDC140-202ENST00000440903 LINC00528Q8N1L1 170 aa5.48□□□□□ -1.53
CCDC140-202ENST00000440903 LRRC71Q8N4P6 559 aa5.48□□□□□ -1.53
CCDC140-202ENST00000440903 GPR161Q8N6U8 529 aaKnown RBP5.48□□□□□ -1.53
CCDC140-202ENST00000440903 USP38Q8NB14 1042 aa5.48□□□□□ -1.53
CCDC140-202ENST00000440903 GOLGA5Q8TBA6 731 aa5.48□□□□□ -1.53
CCDC140-202ENST00000440903 TRAPPC12Q8WVT3 735 aa5.48□□□□□ -1.53
CCDC140-202ENST00000440903 ITPKCQ96DU7 683 aa5.48□□□□□ -1.53
CCDC140-202ENST00000440903 BICD1Q96G01 975 aa5.48□□□□□ -1.53
CCDC140-202ENST00000440903 PAGE5Q96GU1 130 aa5.48□□□□□ -1.53
CCDC140-202ENST00000440903 TOX2Q96NM4 488 aa5.48□□□□□ -1.53
CCDC140-202ENST00000440903 GSDMAQ96QA5 445 aa5.48□□□□□ -1.53
CCDC140-202ENST00000440903 TSG101Q99816 390 aa5.48□□□□□ -1.53
CCDC140-202ENST00000440903 C7orf25Q9BPX7 421 aa5.48□□□□□ -1.53
CCDC140-202ENST00000440903 SH2D3AQ9BRG2 576 aa5.48□□□□□ -1.53
CCDC140-202ENST00000440903 RUSC1Q9BVN2 902 aa5.48□□□□□ -1.53
CCDC140-202ENST00000440903 COL25A1Q9BXS0 654 aaPredicted RBP5.48□□□□□ -1.53
CCDC140-202ENST00000440903 NAT10Q9H0A0 1025 aaKnown RBP5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms