RNA–Protein interactions for RNA: ENST00000440480.6

CDKN1C-204, Transcript of cyclin dependent kinase inhibitor 1C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDKN1C, Length 1,811 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1C-204ENST00000440480 UBE4BO95155 1302 aa23.42■■□□□ 1.34
CDKN1C-204ENST00000440480 COL1A2P08123 1366 aa23.41■■□□□ 1.34
CDKN1C-204ENST00000440480 PDXKO00764 312 aa23.41■■□□□ 1.34
CDKN1C-204ENST00000440480 CALUO43852 315 aaPredicted RBP23.41■■□□□ 1.34
CDKN1C-204ENST00000440480 PPP1R37O75864 691 aa23.41■■□□□ 1.34
CDKN1C-204ENST00000440480 KLRC1P26715 233 aa23.41■■□□□ 1.34
CDKN1C-204ENST00000440480 GTF2BQ00403 316 aa23.41■■□□□ 1.34
CDKN1C-204ENST00000440480 CDK17Q00537 523 aa23.41■■□□□ 1.34
CDKN1C-204ENST00000440480 EFCAB12Q6NXP0 572 aa23.41■■□□□ 1.34
CDKN1C-204ENST00000440480 KSR1Q8IVT5 923 aa23.41■■□□□ 1.34
CDKN1C-204ENST00000440480 CCDC170Q8IYT3 715 aa23.41■■□□□ 1.34
CDKN1C-204ENST00000440480 LRRC71Q8N4P6 559 aa23.41■■□□□ 1.34
CDKN1C-204ENST00000440480 PRPF31Q8WWY3 499 aaKnown RBP23.41■■□□□ 1.34
CDKN1C-204ENST00000440480 ANKRD7Q92527 254 aa23.41■■□□□ 1.34
CDKN1C-204ENST00000440480 KATNAL1Q9BW62 490 aa23.41■■□□□ 1.34
CDKN1C-204ENST00000440480 ZEB2O60315 1214 aa23.4■■□□□ 1.34
CDKN1C-204ENST00000440480 NDUFA10O95299 355 aa23.4■■□□□ 1.34
CDKN1C-204ENST00000440480 GLRA2P23416 452 aa23.4■■□□□ 1.34
CDKN1C-204ENST00000440480 MFSD10Q14728 455 aa23.4■■□□□ 1.34
CDKN1C-204ENST00000440480 SYCP3Q8IZU3 236 aa23.4■■□□□ 1.34
CDKN1C-204ENST00000440480 TMEM161BQ8NDZ6 487 aa23.4■■□□□ 1.34
CDKN1C-204ENST00000440480 PSPC1Q8WXF1 523 aaKnown RBP23.4■■□□□ 1.34
CDKN1C-204ENST00000440480 UPF3AQ9H1J1 476 aaKnown RBP23.4■■□□□ 1.34
CDKN1C-204ENST00000440480 TMEM206Q9H813 350 aa23.4■■□□□ 1.34
CDKN1C-204ENST00000440480 LZTFL1Q9NQ48 299 aa23.4■■□□□ 1.34
CDKN1C-204ENST00000440480 TRAF3IP3Q9Y228 551 aa23.4■■□□□ 1.34
CDKN1C-204ENST00000440480 WDR81Q562E7 1941 aa23.4■■□□□ 1.34
CDKN1C-204ENST00000440480 CASP8AP2Q9UKL3 1982 aa23.4■■□□□ 1.34
CDKN1C-204ENST00000440480 MYADML2A6NDP7 307 aa23.4■■□□□ 1.34
CDKN1C-204ENST00000440480 RRN3P2A6NIE6 340 aa23.4■■□□□ 1.34
CDKN1C-204ENST00000440480 H0YCG3 227 aa23.4■■□□□ 1.34
CDKN1C-204ENST00000440480 INHAP05111 366 aa23.4■■□□□ 1.34
CDKN1C-204ENST00000440480 NAMPTP43490 491 aa23.4■■□□□ 1.34
CDKN1C-204ENST00000440480 PURAQ00577 322 aaKnown RBP23.4■■□□□ 1.34
CDKN1C-204ENST00000440480 DRP2Q13474 957 aa23.4■■□□□ 1.34
CDKN1C-204ENST00000440480 TUBB2AQ13885 445 aa23.4■■□□□ 1.34
CDKN1C-204ENST00000440480 MXD4Q14582 209 aaPredicted RBP23.4■■□□□ 1.34
CDKN1C-204ENST00000440480 GRIK4Q16099 956 aa23.4■■□□□ 1.34
CDKN1C-204ENST00000440480 ZC3H3Q8IXZ2 948 aaKnown RBP23.4■■□□□ 1.34
CDKN1C-204ENST00000440480 ASAP3Q8TDY4 903 aa23.4■■□□□ 1.34
CDKN1C-204ENST00000440480 TSC1Q92574 1164 aa23.4■■□□□ 1.34
CDKN1C-204ENST00000440480 TUBB2BQ9BVA1 445 aa23.4■■□□□ 1.34
CDKN1C-204ENST00000440480 KIFC3Q9BVG8 833 aa23.4■■□□□ 1.34
CDKN1C-204ENST00000440480 TYW1Q9NV66 732 aaKnown RBP23.4■■□□□ 1.34
CDKN1C-204ENST00000440480 SUCLA2Q9P2R7 463 aaPredicted RBP23.4■■□□□ 1.34
CDKN1C-204ENST00000440480 DDX20Q9UHI6 824 aaKnown RBP23.4■■□□□ 1.34
CDKN1C-204ENST00000440480 PTCH2Q9Y6C5 1203 aa23.4■■□□□ 1.34
CDKN1C-204ENST00000440480 HTTP42858 3142 aa23.39■■□□□ 1.33
CDKN1C-204ENST00000440480 DENND3A2RUS2 1198 aa23.39■■□□□ 1.33
CDKN1C-204ENST00000440480 C22orf31O95567 290 aa23.39■■□□□ 1.33
CDKN1C-204ENST00000440480 RPL13P26373 211 aaKnown RBP23.39■■□□□ 1.33
CDKN1C-204ENST00000440480 ABCD1P33897 745 aa23.39■■□□□ 1.33
CDKN1C-204ENST00000440480 PSEN2P49810 448 aa23.39■■□□□ 1.33
CDKN1C-204ENST00000440480 NKX3-2P78367 333 aa23.39■■□□□ 1.33
CDKN1C-204ENST00000440480 PPP2R3AQ06190 1150 aa23.39■■□□□ 1.33
CDKN1C-204ENST00000440480 NCBP1Q09161 790 aaKnown RBP23.39■■□□□ 1.33
CDKN1C-204ENST00000440480 MKRN4PQ13434 485 aaPredicted RBP23.39■■□□□ 1.33
CDKN1C-204ENST00000440480 ADAM9Q13443 819 aa23.39■■□□□ 1.33
CDKN1C-204ENST00000440480 ACCSQ96QU6 501 aa23.39■■□□□ 1.33
CDKN1C-204ENST00000440480 GBP3Q9H0R5 595 aa23.39■■□□□ 1.33
CDKN1C-204ENST00000440480 HMX1Q9NP08 348 aaPredicted RBP23.39■■□□□ 1.33
CDKN1C-204ENST00000440480 SETD4Q9NVD3 440 aa23.39■■□□□ 1.33
CDKN1C-204ENST00000440480 NRCAMQ92823 1304 aa23.39■■□□□ 1.33
CDKN1C-204ENST00000440480 TMOD1P28289 359 aa23.38■■□□□ 1.33
CDKN1C-204ENST00000440480 MTHFD1LQ6UB35 978 aa23.38■■□□□ 1.33
CDKN1C-204ENST00000440480 HS2ST1Q7LGA3 356 aa23.38■■□□□ 1.33
CDKN1C-204ENST00000440480 MNS1Q8NEH6 495 aa23.38■■□□□ 1.33
CDKN1C-204ENST00000440480 NEK11Q8NG66 645 aa23.38■■□□□ 1.33
CDKN1C-204ENST00000440480 DEPTORQ8TB45 409 aa23.38■■□□□ 1.33
CDKN1C-204ENST00000440480 NUCKS1Q9H1E3 243 aaKnown RBP23.38■■□□□ 1.33
CDKN1C-204ENST00000440480 MMRN2Q9H8L6 949 aa23.38■■□□□ 1.33
CDKN1C-204ENST00000440480 AGPAT5Q9NUQ2 364 aa23.38■■□□□ 1.33
CDKN1C-204ENST00000440480 TBX20Q9UMR3 447 aa23.38■■□□□ 1.33
CDKN1C-204ENST00000440480 SIK3Q9Y2K2 1263 aa23.38■■□□□ 1.33
CDKN1C-204ENST00000440480 LRRIQ4A6NIV6 560 aa23.38■■□□□ 1.33
CDKN1C-204ENST00000440480 HAS3O00219 553 aa23.38■■□□□ 1.33
CDKN1C-204ENST00000440480 TGFB1I1O43294 461 aa23.38■■□□□ 1.33
CDKN1C-204ENST00000440480 ADAMTS4O75173 837 aa23.38■■□□□ 1.33
CDKN1C-204ENST00000440480 MYCNP04198 464 aaPredicted RBP23.38■■□□□ 1.33
CDKN1C-204ENST00000440480 SMIM10L2AP0DMW4 78 aa23.38■■□□□ 1.33
CDKN1C-204ENST00000440480 SMIM10L2BP0DMW5 78 aa23.38■■□□□ 1.33
CDKN1C-204ENST00000440480 SCP2P22307 547 aa23.38■■□□□ 1.33
CDKN1C-204ENST00000440480 ZBTB10Q96DT7 871 aa23.38■■□□□ 1.33
CDKN1C-204ENST00000440480 CHP1Q99653 195 aa23.38■■□□□ 1.33
CDKN1C-204ENST00000440480 HAUS4Q9H6D7 363 aa23.38■■□□□ 1.33
CDKN1C-204ENST00000440480 UTP18Q9Y5J1 556 aaKnown RBP eCLIP23.38■■□□□ 1.33
CDKN1C-204ENST00000440480 MSCO60682 206 aa23.37■■□□□ 1.33
CDKN1C-204ENST00000440480 HNRNPH3P31942 346 aaKnown RBP23.37■■□□□ 1.33
CDKN1C-204ENST00000440480 LAMTOR4Q0VGL1 99 aa23.37■■□□□ 1.33
CDKN1C-204ENST00000440480 MARCH8Q5T0T0 291 aa23.37■■□□□ 1.33
CDKN1C-204ENST00000440480 RHPN2Q8IUC4 686 aa23.37■■□□□ 1.33
CDKN1C-204ENST00000440480 ZNF710Q8N1W2 664 aa23.37■■□□□ 1.33
CDKN1C-204ENST00000440480 ACRBPQ8NEB7 543 aa23.37■■□□□ 1.33
CDKN1C-204ENST00000440480 GOLGA5Q8TBA6 731 aa23.37■■□□□ 1.33
CDKN1C-204ENST00000440480 HVCN1Q96D96 273 aa23.37■■□□□ 1.33
CDKN1C-204ENST00000440480 MTG1Q9BT17 334 aaPredicted RBP23.37■■□□□ 1.33
CDKN1C-204ENST00000440480 CGNQ9P2M7 1197 aaKnown RBP23.37■■□□□ 1.33
CDKN1C-204ENST00000440480 ARHGAP28Q9P2N2 729 aa23.37■■□□□ 1.33
CDKN1C-204ENST00000440480 EXOC7Q9UPT5 735 aa23.37■■□□□ 1.33
CDKN1C-204ENST00000440480 ASAP2O43150 1006 aa23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms