RNA–Protein interactions for RNA: ENST00000440421.2

LTBR-202, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 729 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-202ENST00000440421 SYMPKQ92797 1274 aaKnown RBP15.2■□□□□ 0.02
LTBR-202ENST00000440421 CDK5RAP3Q96JB5 506 aa15.2■□□□□ 0.02
LTBR-202ENST00000440421 PNMA5Q96PV4 448 aa15.2■□□□□ 0.02
LTBR-202ENST00000440421 KIFC3Q9BVG8 833 aa15.2■□□□□ 0.02
LTBR-202ENST00000440421 RUSC1Q9BVN2 902 aa15.2■□□□□ 0.02
LTBR-202ENST00000440421 GBP3Q9H0R5 595 aa15.2■□□□□ 0.02
LTBR-202ENST00000440421 CSRNP2Q9H175 543 aa15.2■□□□□ 0.02
LTBR-202ENST00000440421 IGFLR1Q9H665 355 aa15.2■□□□□ 0.02
LTBR-202ENST00000440421 IPPQ9Y573 584 aa15.2■□□□□ 0.02
LTBR-202ENST00000440421 CLIC4Q9Y696 253 aa15.2■□□□□ 0.02
LTBR-202ENST00000440421 NT5C1B-RDH14C9J2C7 533 aa15.19■□□□□ 0.02
LTBR-202ENST00000440421 ZC3H11AO75152 810 aaKnown RBP eCLIP15.19■□□□□ 0.02
LTBR-202ENST00000440421 BMP15O95972 392 aa15.19■□□□□ 0.02
LTBR-202ENST00000440421 ITGA4P13612 1032 aa15.19■□□□□ 0.02
LTBR-202ENST00000440421 NCLP19338 710 aaKnown RBP15.19■□□□□ 0.02
LTBR-202ENST00000440421 GTF2F1P35269 517 aaKnown RBP eCLIP15.19■□□□□ 0.02
LTBR-202ENST00000440421 NAMPTP43490 491 aa15.19■□□□□ 0.02
LTBR-202ENST00000440421 RNASELQ05823 741 aaKnown RBP15.19■□□□□ 0.02
LTBR-202ENST00000440421 HYAL1Q12794 435 aa15.19■□□□□ 0.02
LTBR-202ENST00000440421 PPP2R5AQ15172 486 aa15.19■□□□□ 0.02
LTBR-202ENST00000440421 TMEM132AQ24JP5 1023 aa15.19■□□□□ 0.02
LTBR-202ENST00000440421 CDCA2Q69YH5 1023 aaPredicted RBP15.19■□□□□ 0.02
LTBR-202ENST00000440421 ADGRD2Q7Z7M1 963 aa15.19■□□□□ 0.02
LTBR-202ENST00000440421 CABP7Q86V35 215 aa15.19■□□□□ 0.02
LTBR-202ENST00000440421 URGCPQ8TCY9 931 aa15.19■□□□□ 0.02
LTBR-202ENST00000440421 KIFAP3Q92845 792 aa15.19■□□□□ 0.02
LTBR-202ENST00000440421 CCDC51Q96ER9 411 aa15.19■□□□□ 0.02
LTBR-202ENST00000440421 IFT74Q96LB3 600 aa15.19■□□□□ 0.02
LTBR-202ENST00000440421 APOL6Q9BWW8 343 aa15.19■□□□□ 0.02
LTBR-202ENST00000440421 TRIM6Q9C030 488 aaPredicted RBP15.19■□□□□ 0.02
LTBR-202ENST00000440421 C2orf40Q9H1Z8 148 aa15.19■□□□□ 0.02
LTBR-202ENST00000440421 RSAD1Q9HA92 442 aa15.19■□□□□ 0.02
LTBR-202ENST00000440421 TLR9Q9NR96 1032 aa15.19■□□□□ 0.02
LTBR-202ENST00000440421 TBC1D13Q9NVG8 400 aa15.19■□□□□ 0.02
LTBR-202ENST00000440421 PRMT7Q9NVM4 692 aaPredicted RBP15.19■□□□□ 0.02
LTBR-202ENST00000440421 CLDND1Q9NY35 253 aa15.19■□□□□ 0.02
LTBR-202ENST00000440421 SPG21Q9NZD8 308 aa15.19■□□□□ 0.02
LTBR-202ENST00000440421 MTMR6Q9Y217 621 aa15.19■□□□□ 0.02
LTBR-202ENST00000440421 USP20Q9Y2K6 914 aa15.19■□□□□ 0.02
LTBR-202ENST00000440421 HES2Q9Y543 173 aa15.19■□□□□ 0.02
LTBR-202ENST00000440421 MYO7AQ13402 2215 aa15.19■□□□□ 0.02
LTBR-202ENST00000440421 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.18■□□□□ 0.02
LTBR-202ENST00000440421 TTLL13PA6NNM8 815 aa15.18■□□□□ 0.02
LTBR-202ENST00000440421 STX6O43752 255 aa15.18■□□□□ 0.02
LTBR-202ENST00000440421 HIP1RO75146 1068 aa15.18■□□□□ 0.02
LTBR-202ENST00000440421 NPTXRO95502 500 aa15.18■□□□□ 0.02
LTBR-202ENST00000440421 PRKCBP05771 671 aa15.18■□□□□ 0.02
LTBR-202ENST00000440421 HSP90AA1P07900 732 aaKnown RBP15.18■□□□□ 0.02
LTBR-202ENST00000440421 BMP1P13497 986 aa15.18■□□□□ 0.02
LTBR-202ENST00000440421 PPM1AP35813 382 aa15.18■□□□□ 0.02
LTBR-202ENST00000440421 ALDH7A1P49419 539 aaKnown RBP15.18■□□□□ 0.02
LTBR-202ENST00000440421 AFF1P51825 1210 aaKnown RBP15.18■□□□□ 0.02
LTBR-202ENST00000440421 BCAR1P56945 870 aa15.18■□□□□ 0.02
LTBR-202ENST00000440421 ERVFC1P60507 584 aa15.18■□□□□ 0.02
LTBR-202ENST00000440421 CEBPZQ03701 1054 aaKnown RBP15.18■□□□□ 0.02
LTBR-202ENST00000440421 UBE3AQ05086 875 aa15.18■□□□□ 0.02
LTBR-202ENST00000440421 GRIN1Q05586 938 aa15.18■□□□□ 0.02
LTBR-202ENST00000440421 HYIQ5T013 277 aa15.18■□□□□ 0.02
LTBR-202ENST00000440421 RINT1Q6NUQ1 792 aa15.18■□□□□ 0.02
LTBR-202ENST00000440421 RBM23Q86U06 439 aaKnown RBP15.18■□□□□ 0.02
LTBR-202ENST00000440421 SLC39A11Q8N1S5 342 aa15.18■□□□□ 0.02
LTBR-202ENST00000440421 CNNM3Q8NE01 707 aa15.18■□□□□ 0.02
LTBR-202ENST00000440421 ADAMTS19Q8TE59 1207 aa15.18■□□□□ 0.02
LTBR-202ENST00000440421 MRPS27Q92552 414 aaKnown RBP15.18■□□□□ 0.02
LTBR-202ENST00000440421 PABPC5Q96DU9 382 aaKnown RBP15.18■□□□□ 0.02
LTBR-202ENST00000440421 NT5C3AQ9H0P0 336 aa15.18■□□□□ 0.02
LTBR-202ENST00000440421 RNF39Q9H2S5 420 aa15.18■□□□□ 0.02
LTBR-202ENST00000440421 FZD8Q9H461 694 aa15.18■□□□□ 0.02
LTBR-202ENST00000440421 NXF3Q9H4D5 531 aaKnown RBP15.18■□□□□ 0.02
LTBR-202ENST00000440421 CNTNAP2Q9UHC6 1331 aa15.17■□□□□ 0.02
LTBR-202ENST00000440421 TCF20Q9UGU0 1960 aaKnown RBP15.17■□□□□ 0.02
LTBR-202ENST00000440421 A0A1B0GUA9 196 aa15.17■□□□□ 0.02
LTBR-202ENST00000440421 CCDC169A6NNP5 214 aa15.17■□□□□ 0.02
LTBR-202ENST00000440421 SFI1A8K8P3 1242 aa15.17■□□□□ 0.02
LTBR-202ENST00000440421 H3BQ06 376 aaPredicted RBP15.17■□□□□ 0.02
LTBR-202ENST00000440421 LINC01565O15544 149 aa15.17■□□□□ 0.02
LTBR-202ENST00000440421 POMCP01189 267 aa15.17■□□□□ 0.02
LTBR-202ENST00000440421 MARCKSP29966 332 aaPredicted RBP15.17■□□□□ 0.02
LTBR-202ENST00000440421 UBA7P41226 1012 aa15.17■□□□□ 0.02
LTBR-202ENST00000440421 NRIP1P48552 1158 aa15.17■□□□□ 0.02
LTBR-202ENST00000440421 PEX3P56589 373 aa15.17■□□□□ 0.02
LTBR-202ENST00000440421 PLCB3Q01970 1234 aa15.17■□□□□ 0.02
LTBR-202ENST00000440421 KRT17Q04695 432 aa15.17■□□□□ 0.02
LTBR-202ENST00000440421 RAD51AP2Q09MP3 1159 aa15.17■□□□□ 0.02
LTBR-202ENST00000440421 PRPF4BQ13523 1007 aaKnown RBP15.17■□□□□ 0.02
LTBR-202ENST00000440421 MAPK6Q16659 721 aa15.17■□□□□ 0.02
LTBR-202ENST00000440421 TMEM119Q4V9L6 283 aa15.17■□□□□ 0.02
LTBR-202ENST00000440421 SLC27A1Q6PCB7 646 aa15.17■□□□□ 0.02
LTBR-202ENST00000440421 PPP4R3CPQ6ZMV5 832 aa15.17■□□□□ 0.02
LTBR-202ENST00000440421 C1orf186Q6ZWK4 172 aa15.17■□□□□ 0.02
LTBR-202ENST00000440421 ZNF280BQ86YH2 543 aa15.17■□□□□ 0.02
LTBR-202ENST00000440421 PPP2R3CQ969Q6 453 aa15.17■□□□□ 0.02
LTBR-202ENST00000440421 CALML4Q96GE6 196 aa15.17■□□□□ 0.02
LTBR-202ENST00000440421 AK8Q96MA6 479 aa15.17■□□□□ 0.02
LTBR-202ENST00000440421 CCDC113Q9H0I3 377 aa15.17■□□□□ 0.02
LTBR-202ENST00000440421 NRDE2Q9H7Z3 1164 aa15.17■□□□□ 0.02
LTBR-202ENST00000440421 DNAJB4Q9UDY4 337 aa15.17■□□□□ 0.02
LTBR-202ENST00000440421 PUF60Q9UHX1 559 aaKnown RBP15.17■□□□□ 0.02
LTBR-202ENST00000440421 B4GALT3O60512 393 aa15.16■□□□□ 0.02
LTBR-202ENST00000440421 DDHD2O94830 711 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms