RNA–Protein interactions for RNA: ENST00000439977.6

HERPUD1-204, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERPUD1, Length 2,946 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-204ENST00000439977 CCPG1Q9ULG6 757 aa14.63□□□□□ -0.07
HERPUD1-204ENST00000439977 BCRP11274 1271 aa14.63□□□□□ -0.07
HERPUD1-204ENST00000439977 COMTP21964 271 aa14.63□□□□□ -0.07
HERPUD1-204ENST00000439977 JAMLQ86YT9 394 aa14.63□□□□□ -0.07
HERPUD1-204ENST00000439977 CHURC1Q8WUH1 139 aa14.63□□□□□ -0.07
HERPUD1-204ENST00000439977 CYFIP2Q96F07 1278 aa14.63□□□□□ -0.07
HERPUD1-204ENST00000439977 SEL1LQ9UBV2 794 aa14.63□□□□□ -0.07
HERPUD1-204ENST00000439977 ODF2LQ9ULJ1 636 aa14.63□□□□□ -0.07
HERPUD1-204ENST00000439977 NCANO14594 1321 aa14.63□□□□□ -0.07
HERPUD1-204ENST00000439977 FAM107AO95990 144 aa14.62□□□□□ -0.07
HERPUD1-204ENST00000439977 ANXA13P27216 316 aa14.62□□□□□ -0.07
HERPUD1-204ENST00000439977 HSPA1LP34931 641 aa14.62□□□□□ -0.07
HERPUD1-204ENST00000439977 PPP2R2AP63151 447 aa14.62□□□□□ -0.07
HERPUD1-204ENST00000439977 PPP2R5AQ15172 486 aa14.62□□□□□ -0.07
HERPUD1-204ENST00000439977 EPC2Q52LR7 807 aa14.62□□□□□ -0.07
HERPUD1-204ENST00000439977 PLA2G4FQ68DD2 849 aa14.62□□□□□ -0.07
HERPUD1-204ENST00000439977 CBWD2Q8IUF1 395 aa14.62□□□□□ -0.07
HERPUD1-204ENST00000439977 MXRA8Q9BRK3 442 aa14.62□□□□□ -0.07
HERPUD1-204ENST00000439977 LARSQ9P2J5 1176 aaKnown RBP14.62□□□□□ -0.07
HERPUD1-204ENST00000439977 LRRC37AA6NMS7 1700 aa14.62□□□□□ -0.07
HERPUD1-204ENST00000439977 GOLGA6L10A0A0M3HER8 536 aa14.62□□□□□ -0.07
HERPUD1-204ENST00000439977 GMNCA6NCL1 334 aa14.62□□□□□ -0.07
HERPUD1-204ENST00000439977 A6NNZ2 444 aa14.62□□□□□ -0.07
HERPUD1-204ENST00000439977 SORBS3O60504 671 aa14.62□□□□□ -0.07
HERPUD1-204ENST00000439977 CCDC172P0C7W6 258 aa14.62□□□□□ -0.07
HERPUD1-204ENST00000439977 VCAM1P19320 739 aa14.62□□□□□ -0.07
HERPUD1-204ENST00000439977 EIF2AK2P19525 551 aaKnown RBP14.62□□□□□ -0.07
HERPUD1-204ENST00000439977 PDE4CQ08493 712 aa14.62□□□□□ -0.07
HERPUD1-204ENST00000439977 SPP2Q13103 211 aa14.62□□□□□ -0.07
HERPUD1-204ENST00000439977 TUBB8Q3ZCM7 444 aa14.62□□□□□ -0.07
HERPUD1-204ENST00000439977 C2CD6Q53TS8 623 aa14.62□□□□□ -0.07
HERPUD1-204ENST00000439977 C1orf220Q5T0J3 134 aa14.62□□□□□ -0.07
HERPUD1-204ENST00000439977 TTC27Q6P3X3 843 aa14.62□□□□□ -0.07
HERPUD1-204ENST00000439977 RAPGEF5Q92565 580 aa14.62□□□□□ -0.07
HERPUD1-204ENST00000439977 CARD9Q9H257 536 aa14.62□□□□□ -0.07
HERPUD1-204ENST00000439977 RANBP17Q9H2T7 1088 aaKnown RBP14.62□□□□□ -0.07
HERPUD1-204ENST00000439977 FAM114A2Q9NRY5 505 aa14.62□□□□□ -0.07
HERPUD1-204ENST00000439977 TOPORSQ9NS56 1045 aaPredicted RBP14.62□□□□□ -0.07
HERPUD1-204ENST00000439977 HSPBP1Q9NZL4 362 aa14.62□□□□□ -0.07
HERPUD1-204ENST00000439977 ANKRD31Q8N7Z5 1873 aa14.62□□□□□ -0.07
HERPUD1-204ENST00000439977 MMEP08473 750 aa14.62□□□□□ -0.07
HERPUD1-204ENST00000439977 PYGMP11217 842 aa14.62□□□□□ -0.07
HERPUD1-204ENST00000439977 MYCLP12524 364 aaPredicted RBP14.62□□□□□ -0.07
HERPUD1-204ENST00000439977 ALAS1P13196 640 aa14.62□□□□□ -0.07
HERPUD1-204ENST00000439977 KIF22Q14807 665 aa14.62□□□□□ -0.07
HERPUD1-204ENST00000439977 UGCGQ16739 394 aa14.62□□□□□ -0.07
HERPUD1-204ENST00000439977 SPRED3Q2MJR0 410 aa14.62□□□□□ -0.07
HERPUD1-204ENST00000439977 NOP9Q86U38 636 aaKnown RBP14.62□□□□□ -0.07
HERPUD1-204ENST00000439977 CCDC25Q86WR0 208 aa14.62□□□□□ -0.07
HERPUD1-204ENST00000439977 ARFGAP2Q8N6H7 521 aa14.62□□□□□ -0.07
HERPUD1-204ENST00000439977 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.62□□□□□ -0.07
HERPUD1-204ENST00000439977 SEMA4AQ9H3S1 761 aa14.62□□□□□ -0.07
HERPUD1-204ENST00000439977 VCPKMTQ9H867 229 aa14.62□□□□□ -0.07
HERPUD1-204ENST00000439977 SPDYE2BA6NHP3 402 aa14.61□□□□□ -0.07
HERPUD1-204ENST00000439977 CCDC169A6NNP5 214 aa14.61□□□□□ -0.07
HERPUD1-204ENST00000439977 BHMG1C9JSJ3 638 aaPredicted RBP14.61□□□□□ -0.07
HERPUD1-204ENST00000439977 SPDYE6P0CI01 402 aa14.61□□□□□ -0.07
HERPUD1-204ENST00000439977 FGFR4P22455 802 aa14.61□□□□□ -0.07
HERPUD1-204ENST00000439977 RARRES1P49788 294 aa14.61□□□□□ -0.07
HERPUD1-204ENST00000439977 SF3B2Q13435 895 aaKnown RBP14.61□□□□□ -0.07
HERPUD1-204ENST00000439977 MTMR3Q13615 1198 aa14.61□□□□□ -0.07
HERPUD1-204ENST00000439977 SLC29A2Q14542 456 aa14.61□□□□□ -0.07
HERPUD1-204ENST00000439977 DLGAP5Q15398 846 aa14.61□□□□□ -0.07
HERPUD1-204ENST00000439977 FAM102BQ5T8I3 360 aa14.61□□□□□ -0.07
HERPUD1-204ENST00000439977 DUPD1Q68J44 220 aa14.61□□□□□ -0.07
HERPUD1-204ENST00000439977 HAUS6Q7Z4H7 955 aa14.61□□□□□ -0.07
HERPUD1-204ENST00000439977 PRELID2Q8N945 189 aa14.61□□□□□ -0.07
HERPUD1-204ENST00000439977 DHX38Q92620 1227 aaKnown RBP14.61□□□□□ -0.07
HERPUD1-204ENST00000439977 SEMA4DQ92854 862 aa14.61□□□□□ -0.07
HERPUD1-204ENST00000439977 RAB17Q9H0T7 212 aa14.61□□□□□ -0.07
HERPUD1-204ENST00000439977 ZNF70Q9UC06 446 aaPredicted RBP14.61□□□□□ -0.07
HERPUD1-204ENST00000439977 DDX20Q9UHI6 824 aaKnown RBP14.61□□□□□ -0.07
HERPUD1-204ENST00000439977 USP20Q9Y2K6 914 aa14.61□□□□□ -0.07
HERPUD1-204ENST00000439977 ATRNL1Q5VV63 1379 aa14.61□□□□□ -0.07
HERPUD1-204ENST00000439977 ANKRD63C9JTQ0 380 aa14.61□□□□□ -0.07
HERPUD1-204ENST00000439977 HNRNPH1P31943 449 aaKnown RBP14.61□□□□□ -0.07
HERPUD1-204ENST00000439977 NBPF9Q3BBW0 867 aa14.61□□□□□ -0.07
HERPUD1-204ENST00000439977 EMC10Q5UCC4 262 aa14.61□□□□□ -0.07
HERPUD1-204ENST00000439977 AKT1S1Q96B36 256 aa14.61□□□□□ -0.07
HERPUD1-204ENST00000439977 RNF25Q96BH1 459 aaPredicted RBP14.61□□□□□ -0.07
HERPUD1-204ENST00000439977 SELENOSQ9BQE4 189 aa14.61□□□□□ -0.07
HERPUD1-204ENST00000439977 TMEM117Q9H0C3 514 aa14.61□□□□□ -0.07
HERPUD1-204ENST00000439977 ZDHHC18Q9NUE0 388 aa14.61□□□□□ -0.07
HERPUD1-204ENST00000439977 HERC5Q9UII4 1024 aaKnown RBP14.61□□□□□ -0.07
HERPUD1-204ENST00000439977 SPOPO43791 374 aa14.6□□□□□ -0.07
HERPUD1-204ENST00000439977 ADRB2P07550 413 aa14.6□□□□□ -0.07
HERPUD1-204ENST00000439977 RPL21P46778 160 aaKnown RBP14.6□□□□□ -0.07
HERPUD1-204ENST00000439977 MXI1P50539 228 aa14.6□□□□□ -0.07
HERPUD1-204ENST00000439977 PMS2P54278 862 aa14.6□□□□□ -0.07
HERPUD1-204ENST00000439977 GPC5P78333 572 aa14.6□□□□□ -0.07
HERPUD1-204ENST00000439977 IFI35P80217 286 aaPredicted RBP14.6□□□□□ -0.07
HERPUD1-204ENST00000439977 SP4Q02446 784 aa14.6□□□□□ -0.07
HERPUD1-204ENST00000439977 CETN1Q12798 172 aa14.6□□□□□ -0.07
HERPUD1-204ENST00000439977 INTS8Q75QN2 995 aaKnown RBP14.6□□□□□ -0.07
HERPUD1-204ENST00000439977 EIF1ADQ8N9N8 165 aaKnown RBP14.6□□□□□ -0.07
HERPUD1-204ENST00000439977 XXYLT1Q8NBI6 393 aa14.6□□□□□ -0.07
HERPUD1-204ENST00000439977 SEC14L1Q92503 715 aa14.6□□□□□ -0.07
HERPUD1-204ENST00000439977 STRA6Q9BX79 667 aa14.6□□□□□ -0.07
HERPUD1-204ENST00000439977 CCDC113Q9H0I3 377 aa14.6□□□□□ -0.07
HERPUD1-204ENST00000439977 EPB41L4BQ9H329 900 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms