RNA–Protein interactions for RNA: ENST00000439775.1

SNRPD3-204, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

TSL 3

Gene SNRPD3, Length 640 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-204ENST00000439775 OR52Z1P0C646 297 aa18.1■□□□□ 0.49
SNRPD3-204ENST00000439775 SPATA31C1P0DKV0 1188 aa18.1■□□□□ 0.49
SNRPD3-204ENST00000439775 NCLP19338 710 aaKnown RBP18.1■□□□□ 0.49
SNRPD3-204ENST00000439775 RBM10P98175 930 aaKnown RBP18.1■□□□□ 0.49
SNRPD3-204ENST00000439775 RNASELQ05823 741 aaKnown RBP18.1■□□□□ 0.49
SNRPD3-204ENST00000439775 CAPSQ13938 189 aa18.1■□□□□ 0.49
SNRPD3-204ENST00000439775 NOSTRINQ8IVI9 506 aa18.1■□□□□ 0.49
SNRPD3-204ENST00000439775 MRPL43Q8N983 215 aaKnown RBP18.1■□□□□ 0.49
SNRPD3-204ENST00000439775 FAM184AQ8NB25 1140 aa18.1■□□□□ 0.49
SNRPD3-204ENST00000439775 CNNM3Q8NE01 707 aa18.1■□□□□ 0.49
SNRPD3-204ENST00000439775 URGCPQ8TCY9 931 aa18.1■□□□□ 0.49
SNRPD3-204ENST00000439775 PIGOQ8TEQ8 1089 aa18.1■□□□□ 0.49
SNRPD3-204ENST00000439775 NRDE2Q9H7Z3 1164 aa18.1■□□□□ 0.49
SNRPD3-204ENST00000439775 RSAD1Q9HA92 442 aa18.1■□□□□ 0.49
SNRPD3-204ENST00000439775 FAM86C2PA6NEL3 165 aa18.09■□□□□ 0.49
SNRPD3-204ENST00000439775 C2orf71A6NGG8 1288 aa18.09■□□□□ 0.49
SNRPD3-204ENST00000439775 NT5C1B-RDH14C9J2C7 533 aa18.09■□□□□ 0.49
SNRPD3-204ENST00000439775 GALTP07902 379 aa18.09■□□□□ 0.49
SNRPD3-204ENST00000439775 ATP2B1P20020 1258 aa18.09■□□□□ 0.49
SNRPD3-204ENST00000439775 TRAPPC10P48553 1259 aa18.09■□□□□ 0.49
SNRPD3-204ENST00000439775 MBTD1Q05BQ5 628 aa18.09■□□□□ 0.49
SNRPD3-204ENST00000439775 BMS1Q14692 1282 aaKnown RBP18.09■□□□□ 0.49
SNRPD3-204ENST00000439775 NOTUMQ6P988 496 aa18.09■□□□□ 0.49
SNRPD3-204ENST00000439775 DDX53Q86TM3 631 aaKnown RBP18.09■□□□□ 0.49
SNRPD3-204ENST00000439775 TMEM173Q86WV6 379 aaPredicted RBP18.09■□□□□ 0.49
SNRPD3-204ENST00000439775 CATSPER3Q86XQ3 398 aa18.09■□□□□ 0.49
SNRPD3-204ENST00000439775 ASAP3Q8TDY4 903 aa18.09■□□□□ 0.49
SNRPD3-204ENST00000439775 SUSD6Q92537 303 aa18.09■□□□□ 0.49
SNRPD3-204ENST00000439775 IGSF21Q96ID5 467 aa18.09■□□□□ 0.49
SNRPD3-204ENST00000439775 POLR3CQ9BUI4 534 aaPredicted RBP18.09■□□□□ 0.49
SNRPD3-204ENST00000439775 ZBP1Q9H171 429 aa18.09■□□□□ 0.49
SNRPD3-204ENST00000439775 UBN1Q9NPG3 1134 aa18.09■□□□□ 0.49
SNRPD3-204ENST00000439775 KANSL3Q9P2N6 904 aa18.09■□□□□ 0.49
SNRPD3-204ENST00000439775 STK39Q9UEW8 545 aa18.09■□□□□ 0.49
SNRPD3-204ENST00000439775 DBR1Q9UK59 544 aaKnown RBP18.09■□□□□ 0.49
SNRPD3-204ENST00000439775 IRAK3Q9Y616 596 aa18.09■□□□□ 0.49
SNRPD3-204ENST00000439775 PRR33A8MZF0 331 aa18.08■□□□□ 0.48
SNRPD3-204ENST00000439775 INO80B-WBP1J3KQ70 363 aa18.08■□□□□ 0.48
SNRPD3-204ENST00000439775 INPPL1O15357 1258 aa18.08■□□□□ 0.48
SNRPD3-204ENST00000439775 USO1O60763 962 aaKnown RBP18.08■□□□□ 0.48
SNRPD3-204ENST00000439775 MED24O75448 989 aa18.08■□□□□ 0.48
SNRPD3-204ENST00000439775 HOXB8P17481 243 aaPredicted RBP18.08■□□□□ 0.48
SNRPD3-204ENST00000439775 GLRA2P23416 452 aa18.08■□□□□ 0.48
SNRPD3-204ENST00000439775 NCBP1Q09161 790 aaKnown RBP18.08■□□□□ 0.48
SNRPD3-204ENST00000439775 AMHR2Q16671 573 aa18.08■□□□□ 0.48
SNRPD3-204ENST00000439775 TTC38Q5R3I4 469 aa18.08■□□□□ 0.48
SNRPD3-204ENST00000439775 ANKRD54Q6NXT1 300 aa18.08■□□□□ 0.48
SNRPD3-204ENST00000439775 VPS52Q8N1B4 723 aa18.08■□□□□ 0.48
SNRPD3-204ENST00000439775 MCPH1Q8NEM0 835 aa18.08■□□□□ 0.48
SNRPD3-204ENST00000439775 ERMNQ8TAM6 284 aa18.08■□□□□ 0.48
SNRPD3-204ENST00000439775 CASP10Q92851 521 aa18.08■□□□□ 0.48
SNRPD3-204ENST00000439775 POLR3FQ9H1D9 316 aaPredicted RBP18.08■□□□□ 0.48
SNRPD3-204ENST00000439775 DNAJB4Q9UDY4 337 aa18.08■□□□□ 0.48
SNRPD3-204ENST00000439775 RAPGEFL1Q9UHV5 662 aa18.08■□□□□ 0.48
SNRPD3-204ENST00000439775 LOC730098B7Z3J9 87 aa18.07■□□□□ 0.48
SNRPD3-204ENST00000439775 B4GALT3O60512 393 aa18.07■□□□□ 0.48
SNRPD3-204ENST00000439775 CTSAP10619 480 aa18.07■□□□□ 0.48
SNRPD3-204ENST00000439775 MUTP22033 750 aa18.07■□□□□ 0.48
SNRPD3-204ENST00000439775 U2AF2P26368 475 aaKnown RBP eCLIP18.07■□□□□ 0.48
SNRPD3-204ENST00000439775 RPA1P27694 616 aa18.07■□□□□ 0.48
SNRPD3-204ENST00000439775 TECP42680 631 aa18.07■□□□□ 0.48
SNRPD3-204ENST00000439775 SLC11A1P49279 550 aa18.07■□□□□ 0.48
SNRPD3-204ENST00000439775 GNL2Q13823 731 aaKnown RBP18.07■□□□□ 0.48
SNRPD3-204ENST00000439775 GIT2Q14161 759 aa18.07■□□□□ 0.48
SNRPD3-204ENST00000439775 CBX2Q14781 532 aaPredicted RBP18.07■□□□□ 0.48
SNRPD3-204ENST00000439775 ZNF174Q15697 407 aa18.07■□□□□ 0.48
SNRPD3-204ENST00000439775 HERC4Q5GLZ8 1057 aaPredicted RBP18.07■□□□□ 0.48
SNRPD3-204ENST00000439775 RNF135Q8IUD6 432 aa18.07■□□□□ 0.48
SNRPD3-204ENST00000439775 SMG8Q8ND04 991 aaKnown RBP18.07■□□□□ 0.48
SNRPD3-204ENST00000439775 BCL7CQ8WUZ0 217 aaPredicted RBP18.07■□□□□ 0.48
SNRPD3-204ENST00000439775 NACC1Q96RE7 527 aa18.07■□□□□ 0.48
SNRPD3-204ENST00000439775 TMEM175Q9BSA9 504 aa18.07■□□□□ 0.48
SNRPD3-204ENST00000439775 PHF7Q9BWX1 381 aaPredicted RBP18.07■□□□□ 0.48
SNRPD3-204ENST00000439775 GBP3Q9H0R5 595 aa18.07■□□□□ 0.48
SNRPD3-204ENST00000439775 CSRNP2Q9H175 543 aa18.07■□□□□ 0.48
SNRPD3-204ENST00000439775 S1PR5Q9H228 398 aa18.07■□□□□ 0.48
SNRPD3-204ENST00000439775 NOL7Q9UMY1 257 aaKnown RBP18.07■□□□□ 0.48
SNRPD3-204ENST00000439775 HCN4Q9Y3Q4 1203 aa18.07■□□□□ 0.48
SNRPD3-204ENST00000439775 ARIH1Q9Y4X5 557 aaPredicted RBP18.07■□□□□ 0.48
SNRPD3-204ENST00000439775 IPPQ9Y573 584 aa18.07■□□□□ 0.48
SNRPD3-204ENST00000439775 HCFC2Q9Y5Z7 792 aa18.07■□□□□ 0.48
SNRPD3-204ENST00000439775 ITGA4P13612 1032 aa18.06■□□□□ 0.48
SNRPD3-204ENST00000439775 AFF1P51825 1210 aaKnown RBP18.06■□□□□ 0.48
SNRPD3-204ENST00000439775 RABEP1Q15276 862 aa18.06■□□□□ 0.48
SNRPD3-204ENST00000439775 HAUS3Q68CZ6 603 aa18.06■□□□□ 0.48
SNRPD3-204ENST00000439775 LLGL2Q6P1M3 1020 aa18.06■□□□□ 0.48
SNRPD3-204ENST00000439775 SYCE2Q6PIF2 218 aa18.06■□□□□ 0.48
SNRPD3-204ENST00000439775 POTEGQ6S5H5 508 aa18.06■□□□□ 0.48
SNRPD3-204ENST00000439775 ZNF280BQ86YH2 543 aa18.06■□□□□ 0.48
SNRPD3-204ENST00000439775 CPB2Q96IY4 423 aa18.06■□□□□ 0.48
SNRPD3-204ENST00000439775 EIF2AQ9BY44 585 aaKnown RBP18.06■□□□□ 0.48
SNRPD3-204ENST00000439775 ZMYM2Q9UBW7 1377 aa18.05■□□□□ 0.48
SNRPD3-204ENST00000439775 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.05■□□□□ 0.48
SNRPD3-204ENST00000439775 CLASP2O75122 1294 aaKnown RBP18.05■□□□□ 0.48
SNRPD3-204ENST00000439775 DDHD2O94830 711 aa18.05■□□□□ 0.48
SNRPD3-204ENST00000439775 CXCL14O95715 111 aa18.05■□□□□ 0.48
SNRPD3-204ENST00000439775 ARF4P18085 180 aaPredicted RBP18.05■□□□□ 0.48
SNRPD3-204ENST00000439775 FXR2P51116 673 aaKnown RBP eCLIP18.05■□□□□ 0.48
SNRPD3-204ENST00000439775 TPRNQ4KMQ1 711 aa18.05■□□□□ 0.48
SNRPD3-204ENST00000439775 CDCA2Q69YH5 1023 aaPredicted RBP18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms