RNA–Protein interactions for RNA: ENST00000439518.5

NCKIPSD-206, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 1 (best)

Gene NCKIPSD, Length 1,214 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-206ENST00000439518 ZNF174Q15697 407 aa22.59■■□□□ 1.21
NCKIPSD-206ENST00000439518 TMEM173Q86WV6 379 aaPredicted RBP22.59■■□□□ 1.21
NCKIPSD-206ENST00000439518 CATSPER3Q86XQ3 398 aa22.59■■□□□ 1.21
NCKIPSD-206ENST00000439518 NOSTRINQ8IVI9 506 aa22.59■■□□□ 1.21
NCKIPSD-206ENST00000439518 USP15Q9Y4E8 981 aaPredicted RBP22.59■■□□□ 1.21
NCKIPSD-206ENST00000439518 FAM86C2PA6NEL3 165 aa22.58■■□□□ 1.21
NCKIPSD-206ENST00000439518 C2orf71A6NGG8 1288 aa22.58■■□□□ 1.21
NCKIPSD-206ENST00000439518 B4GALT3O60512 393 aa22.58■■□□□ 1.21
NCKIPSD-206ENST00000439518 TSPAN1O60635 241 aa22.58■■□□□ 1.21
NCKIPSD-206ENST00000439518 MED24O75448 989 aa22.58■■□□□ 1.21
NCKIPSD-206ENST00000439518 ERLIN2O94905 339 aa22.58■■□□□ 1.21
NCKIPSD-206ENST00000439518 OR52Z1P0C646 297 aa22.58■■□□□ 1.21
NCKIPSD-206ENST00000439518 GLRA2P23416 452 aa22.58■■□□□ 1.21
NCKIPSD-206ENST00000439518 AXLP30530 894 aa22.58■■□□□ 1.21
NCKIPSD-206ENST00000439518 TECP42680 631 aa22.58■■□□□ 1.21
NCKIPSD-206ENST00000439518 AFF1P51825 1210 aaKnown RBP22.58■■□□□ 1.21
NCKIPSD-206ENST00000439518 SMC1AQ14683 1233 aaKnown RBP22.58■■□□□ 1.21
NCKIPSD-206ENST00000439518 AMHR2Q16671 573 aa22.58■■□□□ 1.21
NCKIPSD-206ENST00000439518 FAM184AQ8NB25 1140 aa22.58■■□□□ 1.21
NCKIPSD-206ENST00000439518 TMEM169Q96HH4 297 aa22.58■■□□□ 1.21
NCKIPSD-206ENST00000439518 CCDC43Q96MW1 224 aaKnown RBP22.58■■□□□ 1.21
NCKIPSD-206ENST00000439518 POLR3CQ9BUI4 534 aaPredicted RBP22.58■■□□□ 1.21
NCKIPSD-206ENST00000439518 NFKBIZQ9BYH8 718 aa22.58■■□□□ 1.21
NCKIPSD-206ENST00000439518 RSAD1Q9HA92 442 aa22.58■■□□□ 1.21
NCKIPSD-206ENST00000439518 DNAJB4Q9UDY4 337 aa22.58■■□□□ 1.21
NCKIPSD-206ENST00000439518 CNTNAP2Q9UHC6 1331 aa22.57■■□□□ 1.2
NCKIPSD-206ENST00000439518 DCXO43602 365 aa22.57■■□□□ 1.2
NCKIPSD-206ENST00000439518 NCLP19338 710 aaKnown RBP22.57■■□□□ 1.2
NCKIPSD-206ENST00000439518 TRAPPC10P48553 1259 aa22.57■■□□□ 1.2
NCKIPSD-206ENST00000439518 RNASELQ05823 741 aaKnown RBP22.57■■□□□ 1.2
NCKIPSD-206ENST00000439518 MBTD1Q05BQ5 628 aa22.57■■□□□ 1.2
NCKIPSD-206ENST00000439518 TTC38Q5R3I4 469 aa22.57■■□□□ 1.2
NCKIPSD-206ENST00000439518 ZNF280BQ86YH2 543 aa22.57■■□□□ 1.2
NCKIPSD-206ENST00000439518 SMG8Q8ND04 991 aaKnown RBP22.57■■□□□ 1.2
NCKIPSD-206ENST00000439518 CNNM3Q8NE01 707 aa22.57■■□□□ 1.2
NCKIPSD-206ENST00000439518 BCL7CQ8WUZ0 217 aaPredicted RBP22.57■■□□□ 1.2
NCKIPSD-206ENST00000439518 SUSD6Q92537 303 aa22.57■■□□□ 1.2
NCKIPSD-206ENST00000439518 CCDC51Q96ER9 411 aa22.57■■□□□ 1.2
NCKIPSD-206ENST00000439518 IGSF21Q96ID5 467 aa22.57■■□□□ 1.2
NCKIPSD-206ENST00000439518 S1PR5Q9H228 398 aa22.57■■□□□ 1.2
NCKIPSD-206ENST00000439518 DBR1Q9UK59 544 aaKnown RBP22.57■■□□□ 1.2
NCKIPSD-206ENST00000439518 TRIOO75962 3097 aa22.56■■□□□ 1.2
NCKIPSD-206ENST00000439518 INO80B-WBP1J3KQ70 363 aa22.56■■□□□ 1.2
NCKIPSD-206ENST00000439518 USO1O60763 962 aaKnown RBP22.56■■□□□ 1.2
NCKIPSD-206ENST00000439518 U2AF2P26368 475 aaKnown RBP eCLIP22.56■■□□□ 1.2
NCKIPSD-206ENST00000439518 RPA1P27694 616 aa22.56■■□□□ 1.2
NCKIPSD-206ENST00000439518 SLC11A1P49279 550 aa22.56■■□□□ 1.2
NCKIPSD-206ENST00000439518 NOTUMQ6P988 496 aa22.56■■□□□ 1.2
NCKIPSD-206ENST00000439518 SYCE2Q6PIF2 218 aa22.56■■□□□ 1.2
NCKIPSD-206ENST00000439518 DDX53Q86TM3 631 aaKnown RBP22.56■■□□□ 1.2
NCKIPSD-206ENST00000439518 VPS52Q8N1B4 723 aa22.56■■□□□ 1.2
NCKIPSD-206ENST00000439518 C4orf32Q8N8J7 132 aa22.56■■□□□ 1.2
NCKIPSD-206ENST00000439518 URGCPQ8TCY9 931 aa22.56■■□□□ 1.2
NCKIPSD-206ENST00000439518 NACC1Q96RE7 527 aa22.56■■□□□ 1.2
NCKIPSD-206ENST00000439518 EIF2AQ9BY44 585 aaKnown RBP22.56■■□□□ 1.2
NCKIPSD-206ENST00000439518 ZBP1Q9H171 429 aa22.56■■□□□ 1.2
NCKIPSD-206ENST00000439518 POLR3FQ9H1D9 316 aaPredicted RBP22.56■■□□□ 1.2
NCKIPSD-206ENST00000439518 KANSL3Q9P2N6 904 aa22.56■■□□□ 1.2
NCKIPSD-206ENST00000439518 DDHD2O94830 711 aa22.55■■□□□ 1.2
NCKIPSD-206ENST00000439518 CXCL14O95715 111 aa22.55■■□□□ 1.2
NCKIPSD-206ENST00000439518 SRGAP2BP0DMP2 458 aa22.55■■□□□ 1.2
NCKIPSD-206ENST00000439518 NCBP1Q09161 790 aaKnown RBP22.55■■□□□ 1.2
NCKIPSD-206ENST00000439518 ANKRD54Q6NXT1 300 aa22.55■■□□□ 1.2
NCKIPSD-206ENST00000439518 LLGL2Q6P1M3 1020 aa22.55■■□□□ 1.2
NCKIPSD-206ENST00000439518 CPB2Q96IY4 423 aa22.55■■□□□ 1.2
NCKIPSD-206ENST00000439518 GBP3Q9H0R5 595 aa22.55■■□□□ 1.2
NCKIPSD-206ENST00000439518 CSRNP2Q9H175 543 aa22.55■■□□□ 1.2
NCKIPSD-206ENST00000439518 UBN1Q9NPG3 1134 aa22.55■■□□□ 1.2
NCKIPSD-206ENST00000439518 GPRC5CQ9NQ84 441 aa22.55■■□□□ 1.2
NCKIPSD-206ENST00000439518 IPPQ9Y573 584 aa22.55■■□□□ 1.2
NCKIPSD-206ENST00000439518 IRAK3Q9Y616 596 aa22.55■■□□□ 1.2
NCKIPSD-206ENST00000439518 LOC730098B7Z3J9 87 aa22.54■■□□□ 1.2
NCKIPSD-206ENST00000439518 INPPL1O15357 1258 aa22.54■■□□□ 1.2
NCKIPSD-206ENST00000439518 CLASP2O75122 1294 aaKnown RBP22.54■■□□□ 1.2
NCKIPSD-206ENST00000439518 ITGA4P13612 1032 aa22.54■■□□□ 1.2
NCKIPSD-206ENST00000439518 HOXB8P17481 243 aaPredicted RBP22.54■■□□□ 1.2
NCKIPSD-206ENST00000439518 ARF4P18085 180 aaPredicted RBP22.54■■□□□ 1.2
NCKIPSD-206ENST00000439518 GNL2Q13823 731 aaKnown RBP22.54■■□□□ 1.2
NCKIPSD-206ENST00000439518 RABEP1Q15276 862 aa22.54■■□□□ 1.2
NCKIPSD-206ENST00000439518 POTEGQ6S5H5 508 aa22.54■■□□□ 1.2
NCKIPSD-206ENST00000439518 RNF135Q8IUD6 432 aa22.54■■□□□ 1.2
NCKIPSD-206ENST00000439518 MCPH1Q8NEM0 835 aa22.54■■□□□ 1.2
NCKIPSD-206ENST00000439518 ERMNQ8TAM6 284 aa22.54■■□□□ 1.2
NCKIPSD-206ENST00000439518 PHF7Q9BWX1 381 aaPredicted RBP22.54■■□□□ 1.2
NCKIPSD-206ENST00000439518 VN1R3Q9BXE9 311 aa22.54■■□□□ 1.2
NCKIPSD-206ENST00000439518 RNF39Q9H2S5 420 aa22.54■■□□□ 1.2
NCKIPSD-206ENST00000439518 HCFC2Q9Y5Z7 792 aa22.54■■□□□ 1.2
NCKIPSD-206ENST00000439518 PRR33A8MZF0 331 aa22.53■■□□□ 1.2
NCKIPSD-206ENST00000439518 CTSAP10619 480 aa22.53■■□□□ 1.2
NCKIPSD-206ENST00000439518 TOB1P50616 345 aaPredicted RBP22.53■■□□□ 1.2
NCKIPSD-206ENST00000439518 FXR2P51116 673 aaKnown RBP eCLIP22.53■■□□□ 1.2
NCKIPSD-206ENST00000439518 NBR1Q14596 966 aa22.53■■□□□ 1.2
NCKIPSD-206ENST00000439518 BMS1Q14692 1282 aaKnown RBP22.53■■□□□ 1.2
NCKIPSD-206ENST00000439518 CBX2Q14781 532 aaPredicted RBP22.53■■□□□ 1.2
NCKIPSD-206ENST00000439518 HERC4Q5GLZ8 1057 aaPredicted RBP22.53■■□□□ 1.2
NCKIPSD-206ENST00000439518 TMEM175Q9BSA9 504 aa22.53■■□□□ 1.2
NCKIPSD-206ENST00000439518 NOL7Q9UMY1 257 aaKnown RBP22.53■■□□□ 1.2
NCKIPSD-206ENST00000439518 HES2Q9Y543 173 aa22.53■■□□□ 1.2
NCKIPSD-206ENST00000439518 B4GALT5O43286 388 aa22.52■■□□□ 1.2
NCKIPSD-206ENST00000439518 POMCP01189 267 aa22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms