RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 ALG13Q9NP73 1137 aaKnown RBP11.57□□□□□ -0.56
MCF2L-216ENST00000439475 KCND2Q9NZV8 630 aa11.57□□□□□ -0.56
MCF2L-216ENST00000439475 CCDC39Q9UFE4 941 aa11.57□□□□□ -0.56
MCF2L-216ENST00000439475 MTMR6Q9Y217 621 aa11.57□□□□□ -0.56
MCF2L-216ENST00000439475 SZT2Q5T011 3432 aa11.56□□□□□ -0.56
MCF2L-216ENST00000439475 A0A1B0GUA9 196 aa11.56□□□□□ -0.56
MCF2L-216ENST00000439475 CCDC169A6NNP5 214 aa11.56□□□□□ -0.56
MCF2L-216ENST00000439475 K7ERI5 159 aa11.56□□□□□ -0.56
MCF2L-216ENST00000439475 N4BP3O15049 544 aa11.56□□□□□ -0.56
MCF2L-216ENST00000439475 OFD1O75665 1012 aa11.56□□□□□ -0.56
MCF2L-216ENST00000439475 FGF18O76093 207 aa11.56□□□□□ -0.56
MCF2L-216ENST00000439475 ITGB1P05556 798 aa11.56□□□□□ -0.56
MCF2L-216ENST00000439475 ATF7P17544 494 aaPredicted RBP11.56□□□□□ -0.56
MCF2L-216ENST00000439475 ARF4P18085 180 aaPredicted RBP11.56□□□□□ -0.56
MCF2L-216ENST00000439475 HOXA11P31270 313 aaPredicted RBP11.56□□□□□ -0.56
MCF2L-216ENST00000439475 SMTNP53814 917 aa11.56□□□□□ -0.56
MCF2L-216ENST00000439475 PLCB3Q01970 1234 aa11.56□□□□□ -0.56
MCF2L-216ENST00000439475 RESTQ13127 1097 aa11.56□□□□□ -0.56
MCF2L-216ENST00000439475 PRPF4BQ13523 1007 aaKnown RBP11.56□□□□□ -0.56
MCF2L-216ENST00000439475 FAM187BQ17R55 369 aa11.56□□□□□ -0.56
MCF2L-216ENST00000439475 NOMO2Q5JPE7 1267 aa11.56□□□□□ -0.56
MCF2L-216ENST00000439475 CLLU1OSQ5K130 101 aa11.56□□□□□ -0.56
MCF2L-216ENST00000439475 RINT1Q6NUQ1 792 aa11.56□□□□□ -0.56
MCF2L-216ENST00000439475 SLC27A1Q6PCB7 646 aa11.56□□□□□ -0.56
MCF2L-216ENST00000439475 PPP4R3CPQ6ZMV5 832 aa11.56□□□□□ -0.56
MCF2L-216ENST00000439475 LPPQ93052 612 aa11.56□□□□□ -0.56
MCF2L-216ENST00000439475 CPB2Q96IY4 423 aa11.56□□□□□ -0.56
MCF2L-216ENST00000439475 ASB2Q96Q27 587 aa11.56□□□□□ -0.56
MCF2L-216ENST00000439475 PLIN2Q99541 437 aa11.56□□□□□ -0.56
MCF2L-216ENST00000439475 MMTAG2Q9BU76 263 aaKnown RBP11.56□□□□□ -0.56
MCF2L-216ENST00000439475 CCSER1Q9C0I3 900 aa11.56□□□□□ -0.56
MCF2L-216ENST00000439475 FZD8Q9H461 694 aa11.56□□□□□ -0.56
MCF2L-216ENST00000439475 PRDM6Q9NQX0 595 aa11.56□□□□□ -0.56
MCF2L-216ENST00000439475 RNF19AQ9NV58 838 aa11.56□□□□□ -0.56
MCF2L-216ENST00000439475 SPG21Q9NZD8 308 aa11.56□□□□□ -0.56
MCF2L-216ENST00000439475 LZTS1Q9Y250 596 aa11.56□□□□□ -0.56
MCF2L-216ENST00000439475 INPP5FQ9Y2H2 1132 aa11.56□□□□□ -0.56
MCF2L-216ENST00000439475 RBM19Q9Y4C8 960 aaKnown RBP11.56□□□□□ -0.56
MCF2L-216ENST00000439475 ACKR2O00590 384 aa11.55□□□□□ -0.56
MCF2L-216ENST00000439475 NR1I2O75469 434 aa11.55□□□□□ -0.56
MCF2L-216ENST00000439475 ALDH2P05091 517 aa11.55□□□□□ -0.56
MCF2L-216ENST00000439475 PRKCBP05771 671 aa11.55□□□□□ -0.56
MCF2L-216ENST00000439475 PLA2G4BP0C869 781 aa11.55□□□□□ -0.56
MCF2L-216ENST00000439475 LIG1P18858 919 aa11.55□□□□□ -0.56
MCF2L-216ENST00000439475 GUCY2CP25092 1073 aa11.55□□□□□ -0.56
MCF2L-216ENST00000439475 PEX3P56589 373 aa11.55□□□□□ -0.56
MCF2L-216ENST00000439475 DMP1Q13316 513 aaPredicted RBP11.55□□□□□ -0.56
MCF2L-216ENST00000439475 LONRF3Q496Y0 759 aa11.55□□□□□ -0.56
MCF2L-216ENST00000439475 TCEAL5Q5H9L2 206 aa11.55□□□□□ -0.56
MCF2L-216ENST00000439475 UBXN11Q5T124 520 aa11.55□□□□□ -0.56
MCF2L-216ENST00000439475 CDCA2Q69YH5 1023 aaPredicted RBP11.55□□□□□ -0.56
MCF2L-216ENST00000439475 LRRC55Q6ZSA7 311 aa11.55□□□□□ -0.56
MCF2L-216ENST00000439475 EP400NLQ6ZTU2 488 aa11.55□□□□□ -0.56
MCF2L-216ENST00000439475 C1orf186Q6ZWK4 172 aa11.55□□□□□ -0.56
MCF2L-216ENST00000439475 MRPS27Q92552 414 aaKnown RBP11.55□□□□□ -0.56
MCF2L-216ENST00000439475 TMEM169Q96HH4 297 aa11.55□□□□□ -0.56
MCF2L-216ENST00000439475 PNMA5Q96PV4 448 aa11.55□□□□□ -0.56
MCF2L-216ENST00000439475 TMEM134Q9H6X4 195 aa11.55□□□□□ -0.56
MCF2L-216ENST00000439475 KMT5AQ9NQR1 393 aa11.55□□□□□ -0.56
MCF2L-216ENST00000439475 STK39Q9UEW8 545 aa11.55□□□□□ -0.56
MCF2L-216ENST00000439475 GIT1Q9Y2X7 761 aa11.55□□□□□ -0.56
MCF2L-216ENST00000439475 IPPQ9Y573 584 aa11.55□□□□□ -0.56
MCF2L-216ENST00000439475 SRPRBQ9Y5M8 271 aaKnown RBP11.55□□□□□ -0.56
MCF2L-216ENST00000439475 CLIC4Q9Y696 253 aa11.55□□□□□ -0.56
MCF2L-216ENST00000439475 FSD2A1L4K1 749 aa11.54□□□□□ -0.56
MCF2L-216ENST00000439475 H0YCG3 227 aa11.54□□□□□ -0.56
MCF2L-216ENST00000439475 DLL1O00548 723 aa11.54□□□□□ -0.56
MCF2L-216ENST00000439475 HIP1RO75146 1068 aa11.54□□□□□ -0.56
MCF2L-216ENST00000439475 KRT18P05783 430 aaKnown RBP11.54□□□□□ -0.56
MCF2L-216ENST00000439475 BCAR1P56945 870 aa11.54□□□□□ -0.56
MCF2L-216ENST00000439475 CEBPZQ03701 1054 aaKnown RBP11.54□□□□□ -0.56
MCF2L-216ENST00000439475 STK38Q15208 465 aa11.54□□□□□ -0.56
MCF2L-216ENST00000439475 AMHR2Q16671 573 aa11.54□□□□□ -0.56
MCF2L-216ENST00000439475 AGMOQ6ZNB7 445 aa11.54□□□□□ -0.56
MCF2L-216ENST00000439475 PABPC5Q96DU9 382 aaKnown RBP11.54□□□□□ -0.56
MCF2L-216ENST00000439475 TMEM175Q9BSA9 504 aa11.54□□□□□ -0.56
MCF2L-216ENST00000439475 NRDE2Q9H7Z3 1164 aa11.54□□□□□ -0.56
MCF2L-216ENST00000439475 NGRNQ9NPE2 291 aaKnown RBP11.54□□□□□ -0.56
MCF2L-216ENST00000439475 TLR9Q9NR96 1032 aa11.54□□□□□ -0.56
MCF2L-216ENST00000439475 TBC1D13Q9NVG8 400 aa11.54□□□□□ -0.56
MCF2L-216ENST00000439475 LARSQ9P2J5 1176 aaKnown RBP11.54□□□□□ -0.56
MCF2L-216ENST00000439475 PARP2Q9UGN5 583 aa11.54□□□□□ -0.56
MCF2L-216ENST00000439475 FAN1Q9Y2M0 1017 aa11.54□□□□□ -0.56
MCF2L-216ENST00000439475 COL4A4P53420 1690 aaPredicted RBP11.54□□□□□ -0.56
MCF2L-216ENST00000439475 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.53□□□□□ -0.56
MCF2L-216ENST00000439475 ZC3H11AO75152 810 aaKnown RBP eCLIP11.53□□□□□ -0.56
MCF2L-216ENST00000439475 NPTXRO95502 500 aa11.53□□□□□ -0.56
MCF2L-216ENST00000439475 GALTP07902 379 aa11.53□□□□□ -0.56
MCF2L-216ENST00000439475 MARCKSP29966 332 aaPredicted RBP11.53□□□□□ -0.56
MCF2L-216ENST00000439475 DDIT3P35638 169 aa11.53□□□□□ -0.56
MCF2L-216ENST00000439475 NPTX2P47972 431 aa11.53□□□□□ -0.56
MCF2L-216ENST00000439475 SLC12A3P55017 1021 aa11.53□□□□□ -0.56
MCF2L-216ENST00000439475 STRN3Q13033 797 aa11.53□□□□□ -0.56
MCF2L-216ENST00000439475 DHX8Q14562 1220 aaKnown RBP11.53□□□□□ -0.56
MCF2L-216ENST00000439475 SLC39A14Q15043 492 aa11.53□□□□□ -0.56
MCF2L-216ENST00000439475 PTPAQ15257 358 aa11.53□□□□□ -0.56
MCF2L-216ENST00000439475 PUS10Q3MIT2 529 aaKnown RBP11.53□□□□□ -0.56
MCF2L-216ENST00000439475 TMEM119Q4V9L6 283 aa11.53□□□□□ -0.56
MCF2L-216ENST00000439475 FAM173BQ6P4H8 233 aa11.53□□□□□ -0.56
MCF2L-216ENST00000439475 TMC7Q7Z402 723 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms