RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 FAM187BQ17R55 369 aa27.34■■□□□ 1.97
RAPGEF1-206ENST00000438647 HACE1Q8IYU2 909 aa27.34■■□□□ 1.97
RAPGEF1-206ENST00000438647 URGCPQ8TCY9 931 aa27.34■■□□□ 1.97
RAPGEF1-206ENST00000438647 POF1BQ8WVV4 589 aa27.34■■□□□ 1.97
RAPGEF1-206ENST00000438647 SYMPKQ92797 1274 aaKnown RBP27.34■■□□□ 1.97
RAPGEF1-206ENST00000438647 CALML4Q96GE6 196 aa27.34■■□□□ 1.97
RAPGEF1-206ENST00000438647 CPB2Q96IY4 423 aa27.34■■□□□ 1.97
RAPGEF1-206ENST00000438647 ASB2Q96Q27 587 aa27.34■■□□□ 1.97
RAPGEF1-206ENST00000438647 TIPINQ9BVW5 301 aa27.34■■□□□ 1.97
RAPGEF1-206ENST00000438647 TRIM6Q9C030 488 aaPredicted RBP27.34■■□□□ 1.97
RAPGEF1-206ENST00000438647 VCANP13611 3396 aa27.33■■□□□ 1.97
RAPGEF1-206ENST00000438647 FGF18O76093 207 aa27.33■■□□□ 1.97
RAPGEF1-206ENST00000438647 EFNA5P52803 228 aa27.33■■□□□ 1.97
RAPGEF1-206ENST00000438647 LONRF3Q496Y0 759 aa27.33■■□□□ 1.97
RAPGEF1-206ENST00000438647 TCEAL5Q5H9L2 206 aa27.33■■□□□ 1.97
RAPGEF1-206ENST00000438647 NOMO2Q5JPE7 1267 aa27.33■■□□□ 1.97
RAPGEF1-206ENST00000438647 KCNT2Q6UVM3 1135 aa27.33■■□□□ 1.97
RAPGEF1-206ENST00000438647 KCNK18Q7Z418 384 aa27.33■■□□□ 1.97
RAPGEF1-206ENST00000438647 BSNDQ8WZ55 320 aa27.33■■□□□ 1.97
RAPGEF1-206ENST00000438647 DRC1Q96MC2 740 aa27.33■■□□□ 1.97
RAPGEF1-206ENST00000438647 PNMA5Q96PV4 448 aa27.33■■□□□ 1.97
RAPGEF1-206ENST00000438647 FZD8Q9H461 694 aa27.33■■□□□ 1.97
RAPGEF1-206ENST00000438647 RSAD1Q9HA92 442 aa27.33■■□□□ 1.97
RAPGEF1-206ENST00000438647 NCK2O43639 380 aa27.32■■□□□ 1.96
RAPGEF1-206ENST00000438647 OFD1O75665 1012 aa27.32■■□□□ 1.96
RAPGEF1-206ENST00000438647 RINT1Q6NUQ1 792 aa27.32■■□□□ 1.96
RAPGEF1-206ENST00000438647 SLC27A1Q6PCB7 646 aa27.32■■□□□ 1.96
RAPGEF1-206ENST00000438647 KCND2Q9NZV8 630 aa27.32■■□□□ 1.96
RAPGEF1-206ENST00000438647 DAXXQ9UER7 740 aaPredicted RBP27.32■■□□□ 1.96
RAPGEF1-206ENST00000438647 PUF60Q9UHX1 559 aaKnown RBP27.32■■□□□ 1.96
RAPGEF1-206ENST00000438647 LZTS1Q9Y250 596 aa27.32■■□□□ 1.96
RAPGEF1-206ENST00000438647 INPP5FQ9Y2H2 1132 aa27.32■■□□□ 1.96
RAPGEF1-206ENST00000438647 IPPQ9Y573 584 aa27.32■■□□□ 1.96
RAPGEF1-206ENST00000438647 CLIC4Q9Y696 253 aa27.32■■□□□ 1.96
RAPGEF1-206ENST00000438647 A0A1B0GUA9 196 aa27.31■■□□□ 1.96
RAPGEF1-206ENST00000438647 MEIS3P2A8K0S8 358 aa27.31■■□□□ 1.96
RAPGEF1-206ENST00000438647 B4GALT5O43286 388 aa27.31■■□□□ 1.96
RAPGEF1-206ENST00000438647 SSBP05455 408 aaKnown RBP eCLIP27.31■■□□□ 1.96
RAPGEF1-206ENST00000438647 ITGA4P13612 1032 aa27.31■■□□□ 1.96
RAPGEF1-206ENST00000438647 ALDH7A1P49419 539 aaKnown RBP27.31■■□□□ 1.96
RAPGEF1-206ENST00000438647 PLCB3Q01970 1234 aa27.31■■□□□ 1.96
RAPGEF1-206ENST00000438647 KRT17Q04695 432 aa27.31■■□□□ 1.96
RAPGEF1-206ENST00000438647 RNASELQ05823 741 aaKnown RBP27.31■■□□□ 1.96
RAPGEF1-206ENST00000438647 CAMK1Q14012 370 aa27.31■■□□□ 1.96
RAPGEF1-206ENST00000438647 TMEM119Q4V9L6 283 aa27.31■■□□□ 1.96
RAPGEF1-206ENST00000438647 AGMOQ6ZNB7 445 aa27.31■■□□□ 1.96
RAPGEF1-206ENST00000438647 C1orf186Q6ZWK4 172 aa27.31■■□□□ 1.96
RAPGEF1-206ENST00000438647 SYT2Q8N9I0 419 aaPredicted RBP27.31■■□□□ 1.96
RAPGEF1-206ENST00000438647 RASSF8Q8NHQ8 419 aa27.31■■□□□ 1.96
RAPGEF1-206ENST00000438647 RUSC1Q9BVN2 902 aa27.31■■□□□ 1.96
RAPGEF1-206ENST00000438647 EIF2AQ9BY44 585 aaKnown RBP27.31■■□□□ 1.96
RAPGEF1-206ENST00000438647 C17orf75Q9HAS0 396 aa27.31■■□□□ 1.96
RAPGEF1-206ENST00000438647 TBC1D13Q9NVG8 400 aa27.31■■□□□ 1.96
RAPGEF1-206ENST00000438647 SPG21Q9NZD8 308 aa27.31■■□□□ 1.96
RAPGEF1-206ENST00000438647 KANSL3Q9P2N6 904 aa27.31■■□□□ 1.96
RAPGEF1-206ENST00000438647 HIP1RO75146 1068 aa27.3■■□□□ 1.96
RAPGEF1-206ENST00000438647 CSPG5O95196 566 aa27.3■■□□□ 1.96
RAPGEF1-206ENST00000438647 PRKCBP05771 671 aa27.3■■□□□ 1.96
RAPGEF1-206ENST00000438647 GUCY2CP25092 1073 aa27.3■■□□□ 1.96
RAPGEF1-206ENST00000438647 DNAJB1P25685 340 aa27.3■■□□□ 1.96
RAPGEF1-206ENST00000438647 TFF2Q03403 129 aa27.3■■□□□ 1.96
RAPGEF1-206ENST00000438647 DMP1Q13316 513 aaPredicted RBP27.3■■□□□ 1.96
RAPGEF1-206ENST00000438647 PRPF4BQ13523 1007 aaKnown RBP27.3■■□□□ 1.96
RAPGEF1-206ENST00000438647 PTPAQ15257 358 aa27.3■■□□□ 1.96
RAPGEF1-206ENST00000438647 TMEM132AQ24JP5 1023 aa27.3■■□□□ 1.96
RAPGEF1-206ENST00000438647 SMG8Q8ND04 991 aaKnown RBP27.3■■□□□ 1.96
RAPGEF1-206ENST00000438647 PLIN2Q99541 437 aa27.3■■□□□ 1.96
RAPGEF1-206ENST00000438647 UBE2ZQ9H832 354 aaPredicted RBP27.3■■□□□ 1.96
RAPGEF1-206ENST00000438647 TLR9Q9NR96 1032 aa27.3■■□□□ 1.96
RAPGEF1-206ENST00000438647 KCNG1Q9UIX4 513 aa27.3■■□□□ 1.96
RAPGEF1-206ENST00000438647 PHLPP2Q6ZVD8 1323 aa27.3■■□□□ 1.96
RAPGEF1-206ENST00000438647 MYO7AQ13402 2215 aa27.29■■□□□ 1.96
RAPGEF1-206ENST00000438647 ACKR2O00590 384 aa27.29■■□□□ 1.96
RAPGEF1-206ENST00000438647 PLA2G4BP0C869 781 aa27.29■■□□□ 1.96
RAPGEF1-206ENST00000438647 PDE12Q6L8Q7 609 aaKnown RBP27.29■■□□□ 1.96
RAPGEF1-206ENST00000438647 FAM173BQ6P4H8 233 aa27.29■■□□□ 1.96
RAPGEF1-206ENST00000438647 MRPS27Q92552 414 aaKnown RBP27.29■■□□□ 1.96
RAPGEF1-206ENST00000438647 CCDC113Q9H0I3 377 aa27.29■■□□□ 1.96
RAPGEF1-206ENST00000438647 POLD4Q9HCU8 107 aa27.29■■□□□ 1.96
RAPGEF1-206ENST00000438647 CCDC169A6NNP5 214 aa27.28■■□□□ 1.96
RAPGEF1-206ENST00000438647 DLL1O00548 723 aa27.28■■□□□ 1.96
RAPGEF1-206ENST00000438647 N4BP3O15049 544 aa27.28■■□□□ 1.96
RAPGEF1-206ENST00000438647 ZC3H11AO75152 810 aaKnown RBP eCLIP27.28■■□□□ 1.96
RAPGEF1-206ENST00000438647 SLC12A3P55017 1021 aa27.28■■□□□ 1.96
RAPGEF1-206ENST00000438647 PEX3P56589 373 aa27.28■■□□□ 1.96
RAPGEF1-206ENST00000438647 BCAR1P56945 870 aa27.28■■□□□ 1.96
RAPGEF1-206ENST00000438647 MICAL1Q8TDZ2 1067 aa27.28■■□□□ 1.96
RAPGEF1-206ENST00000438647 PABPC5Q96DU9 382 aaKnown RBP27.28■■□□□ 1.96
RAPGEF1-206ENST00000438647 ADPGKQ9BRR6 497 aa27.28■■□□□ 1.96
RAPGEF1-206ENST00000438647 SRPRBQ9Y5M8 271 aaKnown RBP27.28■■□□□ 1.96
RAPGEF1-206ENST00000438647 MORC2Q9Y6X9 1032 aaPredicted RBP27.28■■□□□ 1.96
RAPGEF1-206ENST00000438647 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP27.27■■□□□ 1.96
RAPGEF1-206ENST00000438647 NPTXRO95502 500 aa27.27■■□□□ 1.96
RAPGEF1-206ENST00000438647 MARCKSP29966 332 aaPredicted RBP27.27■■□□□ 1.96
RAPGEF1-206ENST00000438647 PBX3P40426 434 aa27.27■■□□□ 1.96
RAPGEF1-206ENST00000438647 NPTX2P47972 431 aa27.27■■□□□ 1.96
RAPGEF1-206ENST00000438647 CEBPZQ03701 1054 aaKnown RBP27.27■■□□□ 1.96
RAPGEF1-206ENST00000438647 GRIN1Q05586 938 aa27.27■■□□□ 1.96
RAPGEF1-206ENST00000438647 DAW1Q8N136 415 aa27.27■■□□□ 1.96
RAPGEF1-206ENST00000438647 SLC39A11Q8N1S5 342 aa27.27■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms