RNA–Protein interactions for RNA: ENST00000438552.6

SNRPB-202, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SNRPB, Length 1,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-202ENST00000438552 NCKAP1LP55160 1127 aa17.8■□□□□ 0.44
SNRPB-202ENST00000438552 SMAD3P84022 425 aaKnown RBP17.8■□□□□ 0.44
SNRPB-202ENST00000438552 PCBP1Q15365 356 aaKnown RBP eCLIP17.8■□□□□ 0.449e-9■■■■□ 24.2
SNRPB-202ENST00000438552 FAM187BQ17R55 369 aa17.8■□□□□ 0.44
SNRPB-202ENST00000438552 SLC24A5Q71RS6 500 aa17.8■□□□□ 0.44
SNRPB-202ENST00000438552 CDR2LQ86X02 465 aaPredicted RBP17.8■□□□□ 0.44
SNRPB-202ENST00000438552 NPAS4Q8IUM7 802 aa17.8■□□□□ 0.44
SNRPB-202ENST00000438552 TMEM87AQ8NBN3 555 aa17.8■□□□□ 0.44
SNRPB-202ENST00000438552 TMEM161BQ8NDZ6 487 aa17.8■□□□□ 0.44
SNRPB-202ENST00000438552 TOP1MTQ969P6 601 aa17.8■□□□□ 0.44
SNRPB-202ENST00000438552 ZBED2Q9BTP6 218 aa17.8■□□□□ 0.44
SNRPB-202ENST00000438552 PBX4Q9BYU1 374 aa17.8■□□□□ 0.44
SNRPB-202ENST00000438552 BLZF1Q9H2G9 400 aa17.8■□□□□ 0.44
SNRPB-202ENST00000438552 CHST12Q9NRB3 414 aa17.8■□□□□ 0.44
SNRPB-202ENST00000438552 DACT1Q9NYF0 836 aa17.8■□□□□ 0.44
SNRPB-202ENST00000438552 YBX2Q9Y2T7 364 aaKnown RBP17.8■□□□□ 0.44
SNRPB-202ENST00000438552 CHD9Q3L8U1 2897 aa17.79■□□□□ 0.44
SNRPB-202ENST00000438552 TLL1O43897 1013 aa17.79■□□□□ 0.44
SNRPB-202ENST00000438552 DNAJB2P25686 324 aa17.79■□□□□ 0.44
SNRPB-202ENST00000438552 AXLP30530 894 aa17.79■□□□□ 0.44
SNRPB-202ENST00000438552 SMTNP53814 917 aa17.79■□□□□ 0.44
SNRPB-202ENST00000438552 ASIC1P78348 528 aa17.79■□□□□ 0.44
SNRPB-202ENST00000438552 AMPD3Q01432 767 aa17.79■□□□□ 0.44
SNRPB-202ENST00000438552 PRPF4BQ13523 1007 aaKnown RBP17.79■□□□□ 0.44
SNRPB-202ENST00000438552 TMEM132AQ24JP5 1023 aa17.79■□□□□ 0.44
SNRPB-202ENST00000438552 UBXN11Q5T124 520 aa17.79■□□□□ 0.44
SNRPB-202ENST00000438552 NOTUMQ6P988 496 aa17.79■□□□□ 0.44
SNRPB-202ENST00000438552 RNF169Q8NCN4 708 aa17.79■□□□□ 0.44
SNRPB-202ENST00000438552 PRIMPOLQ96LW4 560 aa17.79■□□□□ 0.44
SNRPB-202ENST00000438552 FIZ1Q96SL8 496 aa17.79■□□□□ 0.44
SNRPB-202ENST00000438552 NTPCRQ9BSD7 190 aaKnown RBP17.79■□□□□ 0.44
SNRPB-202ENST00000438552 LRRC27Q9C0I9 530 aa17.79■□□□□ 0.44
SNRPB-202ENST00000438552 USP25Q9UHP3 1055 aa17.79■□□□□ 0.44
SNRPB-202ENST00000438552 FRMD3A2A2Y4 597 aa17.78■□□□□ 0.44
SNRPB-202ENST00000438552 LCHNA4D1U4 455 aa17.78■□□□□ 0.44
SNRPB-202ENST00000438552 K7ERI5 159 aa17.78■□□□□ 0.44
SNRPB-202ENST00000438552 ACKR2O00590 384 aa17.78■□□□□ 0.44
SNRPB-202ENST00000438552 TRAK2O60296 914 aa17.78■□□□□ 0.44
SNRPB-202ENST00000438552 MAPTP10636 758 aaKnown RBP17.78■□□□□ 0.44
SNRPB-202ENST00000438552 ATF7P17544 494 aaPredicted RBP17.78■□□□□ 0.44
SNRPB-202ENST00000438552 GAP43P17677 238 aa17.78■□□□□ 0.44
SNRPB-202ENST00000438552 NMT1P30419 496 aaKnown RBP17.78■□□□□ 0.44
SNRPB-202ENST00000438552 GATMP50440 423 aa17.78■□□□□ 0.44
SNRPB-202ENST00000438552 CUL4BQ13620 913 aa17.78■□□□□ 0.44
SNRPB-202ENST00000438552 FAM43BQ6ZT52 329 aaPredicted RBP17.78■□□□□ 0.44
SNRPB-202ENST00000438552 ECHDC2Q86YB7 292 aa17.78■□□□□ 0.44
SNRPB-202ENST00000438552 FAM178BQ8IXR5 827 aa17.78■□□□□ 0.44
SNRPB-202ENST00000438552 FMR1NBQ8N0W7 255 aaPredicted RBP17.78■□□□□ 0.44
SNRPB-202ENST00000438552 CRIPAKQ8N1N5 446 aa17.78■□□□□ 0.44
SNRPB-202ENST00000438552 PAGE5Q96GU1 130 aa17.78■□□□□ 0.44
SNRPB-202ENST00000438552 C7orf25Q9BPX7 421 aa17.78■□□□□ 0.44
SNRPB-202ENST00000438552 EIF2AQ9BY44 585 aaKnown RBP17.78■□□□□ 0.44
SNRPB-202ENST00000438552 NKX2-4Q9H2Z4 354 aa17.78■□□□□ 0.44
SNRPB-202ENST00000438552 PDZD7Q9H5P4 517 aa17.78■□□□□ 0.44
SNRPB-202ENST00000438552 TMEM134Q9H6X4 195 aa17.78■□□□□ 0.44
SNRPB-202ENST00000438552 FAM105AQ9NUU6 356 aa17.78■□□□□ 0.44
SNRPB-202ENST00000438552 PANK4Q9NVE7 773 aa17.78■□□□□ 0.44
SNRPB-202ENST00000438552 TBC1D7Q9P0N9 293 aa17.78■□□□□ 0.44
SNRPB-202ENST00000438552 LRFN2Q9ULH4 789 aa17.78■□□□□ 0.44
SNRPB-202ENST00000438552 PCDHA11Q9Y5I1 949 aa17.78■□□□□ 0.44
SNRPB-202ENST00000438552 COL4A4P53420 1690 aaPredicted RBP17.77■□□□□ 0.44
SNRPB-202ENST00000438552 A0A0U1RQF3 1178 aa17.77■□□□□ 0.44
SNRPB-202ENST00000438552 ARHGEF15O94989 841 aa17.77■□□□□ 0.44
SNRPB-202ENST00000438552 ZNF202O95125 648 aa17.77■□□□□ 0.44
SNRPB-202ENST00000438552 CA3P07451 260 aa17.77■□□□□ 0.44
SNRPB-202ENST00000438552 STAG3L1P0CL83 205 aa17.77■□□□□ 0.44
SNRPB-202ENST00000438552 FGFR1P11362 822 aa17.77■□□□□ 0.44
SNRPB-202ENST00000438552 HTRA4P83105 476 aaPredicted RBP17.77■□□□□ 0.44
SNRPB-202ENST00000438552 FAM160A1Q05DH4 1040 aa17.77■□□□□ 0.44
SNRPB-202ENST00000438552 NCBP1Q09161 790 aaKnown RBP17.77■□□□□ 0.44
SNRPB-202ENST00000438552 COASYQ13057 564 aa17.77■□□□□ 0.44
SNRPB-202ENST00000438552 RAB30Q15771 203 aa17.77■□□□□ 0.44
SNRPB-202ENST00000438552 NT5DC1Q5TFE4 455 aa17.77■□□□□ 0.44
SNRPB-202ENST00000438552 CNNM4Q6P4Q7 775 aa17.77■□□□□ 0.44
SNRPB-202ENST00000438552 KRBA2Q6ZNG9 492 aa17.77■□□□□ 0.44
SNRPB-202ENST00000438552 HAUS6Q7Z4H7 955 aa17.77■□□□□ 0.44
SNRPB-202ENST00000438552 CCDC65Q8IXS2 484 aa17.77■□□□□ 0.44
SNRPB-202ENST00000438552 CNNM3Q8NE01 707 aa17.77■□□□□ 0.44
SNRPB-202ENST00000438552 CCDC51Q96ER9 411 aa17.77■□□□□ 0.44
SNRPB-202ENST00000438552 YME1L1Q96TA2 773 aa17.77■□□□□ 0.44
SNRPB-202ENST00000438552 RC3H2Q9HBD1 1191 aaKnown RBP17.77■□□□□ 0.44
SNRPB-202ENST00000438552 TMEM161AQ9NX61 479 aa17.77■□□□□ 0.44
SNRPB-202ENST00000438552 SEL1LQ9UBV2 794 aa17.77■□□□□ 0.44
SNRPB-202ENST00000438552 MSRAQ9UJ68 235 aa17.77■□□□□ 0.44
SNRPB-202ENST00000438552 PCDHB7Q9Y5E2 793 aa17.77■□□□□ 0.44
SNRPB-202ENST00000438552 RALGAPA2Q2PPJ7 1873 aa17.77■□□□□ 0.43
SNRPB-202ENST00000438552 H0YCG3 227 aa17.76■□□□□ 0.43
SNRPB-202ENST00000438552 N4BP3O15049 544 aa17.76■□□□□ 0.43
SNRPB-202ENST00000438552 NPTXRO95502 500 aa17.76■□□□□ 0.43
SNRPB-202ENST00000438552 PRR29P0C7W0 189 aa17.76■□□□□ 0.43
SNRPB-202ENST00000438552 FXR1P51114 621 aaKnown RBP eCLIP17.76■□□□□ 0.43
SNRPB-202ENST00000438552 RAB27AP51159 221 aa17.76■□□□□ 0.43
SNRPB-202ENST00000438552 FAM189BP81408 668 aa17.76■□□□□ 0.43
SNRPB-202ENST00000438552 STRN3Q13033 797 aa17.76■□□□□ 0.43
SNRPB-202ENST00000438552 PAN2Q504Q3 1202 aaKnown RBP17.76■□□□□ 0.43
SNRPB-202ENST00000438552 ZC2HC1CQ53FD0 456 aaPredicted RBP17.76■□□□□ 0.43
SNRPB-202ENST00000438552 HERC4Q5GLZ8 1057 aaPredicted RBP17.76■□□□□ 0.43
SNRPB-202ENST00000438552 ATF7IP2Q5U623 682 aa17.76■□□□□ 0.43
SNRPB-202ENST00000438552 EEF1DP3Q658K8 133 aa17.76■□□□□ 0.43
SNRPB-202ENST00000438552 SLC27A1Q6PCB7 646 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms