RNA–Protein interactions for RNA: ENST00000437681.1

SNHG3-202, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 2 BASIC

Gene SNHG3, Length 2,614 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-202ENST00000437681 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.64□□□□□ -0.39
SNHG3-202ENST00000437681 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.64□□□□□ -0.39
SNHG3-202ENST00000437681 MYMKA6NI61 221 aa12.64□□□□□ -0.39
SNHG3-202ENST00000437681 PPP1R37O75864 691 aa12.64□□□□□ -0.39
SNHG3-202ENST00000437681 ZNF202O95125 648 aa12.64□□□□□ -0.39
SNHG3-202ENST00000437681 FAM193AP78312 1265 aa12.64□□□□□ -0.39
SNHG3-202ENST00000437681 KIZQ2M2Z5 673 aa12.64□□□□□ -0.39
SNHG3-202ENST00000437681 TMEM161BQ8NDZ6 487 aa12.64□□□□□ -0.39
SNHG3-202ENST00000437681 SP7Q8TDD2 431 aaPredicted RBP12.64□□□□□ -0.39
SNHG3-202ENST00000437681 PAGE5Q96GU1 130 aa12.64□□□□□ -0.39
SNHG3-202ENST00000437681 MRPL4Q9BYD3 311 aaKnown RBP12.64□□□□□ -0.39
SNHG3-202ENST00000437681 TMEM206Q9H813 350 aa12.64□□□□□ -0.39
SNHG3-202ENST00000437681 TMEM161AQ9NX61 479 aa12.64□□□□□ -0.39
SNHG3-202ENST00000437681 A0A1B0GUA9 196 aa12.63□□□□□ -0.39
SNHG3-202ENST00000437681 ENPP3O14638 875 aa12.63□□□□□ -0.39
SNHG3-202ENST00000437681 TRAK2O60296 914 aa12.63□□□□□ -0.39
SNHG3-202ENST00000437681 ERLIN2O94905 339 aa12.63□□□□□ -0.39
SNHG3-202ENST00000437681 WDR5P61964 334 aaKnown RBP12.63□□□□□ -0.39
SNHG3-202ENST00000437681 HTRA4P83105 476 aaPredicted RBP12.63□□□□□ -0.39
SNHG3-202ENST00000437681 DRP2Q13474 957 aa12.63□□□□□ -0.39
SNHG3-202ENST00000437681 ZNF365Q70YC5 407 aa12.63□□□□□ -0.39
SNHG3-202ENST00000437681 DBF4BQ8NFT6 615 aa12.63□□□□□ -0.39
SNHG3-202ENST00000437681 DHX58Q96C10 678 aa12.63□□□□□ -0.39
SNHG3-202ENST00000437681 SCLYQ96I15 445 aa12.63□□□□□ -0.39
SNHG3-202ENST00000437681 OSMRQ99650 979 aa12.63□□□□□ -0.39
SNHG3-202ENST00000437681 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.63□□□□□ -0.391e-42■□□□□ 10.2
SNHG3-202ENST00000437681 TBC1D7Q9P0N9 293 aa12.63□□□□□ -0.39
SNHG3-202ENST00000437681 STYXL1Q9Y6J8 313 aa12.63□□□□□ -0.39
SNHG3-202ENST00000437681 SLC4A7Q9Y6M7 1214 aa12.63□□□□□ -0.39
SNHG3-202ENST00000437681 A0A0U1RQF3 1178 aa12.63□□□□□ -0.39
SNHG3-202ENST00000437681 C9IYK1 514 aa12.63□□□□□ -0.39
SNHG3-202ENST00000437681 TSPAN1O60635 241 aa12.63□□□□□ -0.39
SNHG3-202ENST00000437681 TPM2P07951 284 aa12.63□□□□□ -0.39
SNHG3-202ENST00000437681 GHRP10912 638 aa12.63□□□□□ -0.39
SNHG3-202ENST00000437681 PROZP22891 400 aa12.63□□□□□ -0.39
SNHG3-202ENST00000437681 PAX3P23760 479 aa12.63□□□□□ -0.39
SNHG3-202ENST00000437681 NDUFA8P51970 172 aa12.63□□□□□ -0.39
SNHG3-202ENST00000437681 STRN3Q13033 797 aa12.63□□□□□ -0.39
SNHG3-202ENST00000437681 SNW1Q13573 536 aaKnown RBP12.63□□□□□ -0.39
SNHG3-202ENST00000437681 MYBPC2Q14324 1141 aa12.63□□□□□ -0.39
SNHG3-202ENST00000437681 NFIL3Q16649 462 aa12.63□□□□□ -0.39
SNHG3-202ENST00000437681 NT5DC1Q5TFE4 455 aa12.63□□□□□ -0.39
SNHG3-202ENST00000437681 SLFN12LQ6IEE8 588 aa12.63□□□□□ -0.39
SNHG3-202ENST00000437681 CATSPER4Q7RTX7 472 aa12.63□□□□□ -0.39
SNHG3-202ENST00000437681 MAP4K3Q8IVH8 894 aa12.63□□□□□ -0.39
SNHG3-202ENST00000437681 CMTR2Q8IYT2 770 aaKnown RBP12.63□□□□□ -0.39
SNHG3-202ENST00000437681 SPATA20Q8TB22 786 aa12.63□□□□□ -0.39
SNHG3-202ENST00000437681 TOP1MTQ969P6 601 aa12.63□□□□□ -0.39
SNHG3-202ENST00000437681 SCLT1Q96NL6 688 aa12.63□□□□□ -0.39
SNHG3-202ENST00000437681 FIZ1Q96SL8 496 aa12.63□□□□□ -0.39
SNHG3-202ENST00000437681 PANK2Q9BZ23 570 aa12.63□□□□□ -0.39
SNHG3-202ENST00000437681 TMX1Q9H3N1 280 aa12.63□□□□□ -0.39
SNHG3-202ENST00000437681 SMC2O95347 1197 aa12.62□□□□□ -0.39
SNHG3-202ENST00000437681 PRKCBP05771 671 aa12.62□□□□□ -0.39
SNHG3-202ENST00000437681 CTSHP09668 335 aa12.62□□□□□ -0.39
SNHG3-202ENST00000437681 SYN1P17600 705 aa12.62□□□□□ -0.39
SNHG3-202ENST00000437681 MDM2Q00987 491 aaPredicted RBP12.62□□□□□ -0.39
SNHG3-202ENST00000437681 CT47A1Q5JQC4 288 aaPredicted RBP12.62□□□□□ -0.39
SNHG3-202ENST00000437681 ZNF720Q7Z2F6 126 aa12.62□□□□□ -0.39
SNHG3-202ENST00000437681 GOLGA5Q8TBA6 731 aa12.62□□□□□ -0.39
SNHG3-202ENST00000437681 BSNDQ8WZ55 320 aa12.62□□□□□ -0.39
SNHG3-202ENST00000437681 GSDMAQ96QA5 445 aa12.62□□□□□ -0.39
SNHG3-202ENST00000437681 AGO3Q9H9G7 860 aaKnown RBP12.62□□□□□ -0.39
SNHG3-202ENST00000437681 PANK4Q9NVE7 773 aa12.62□□□□□ -0.39
SNHG3-202ENST00000437681 K7ERI5 159 aa12.62□□□□□ -0.39
SNHG3-202ENST00000437681 MBD3O95983 291 aa12.62□□□□□ -0.39
SNHG3-202ENST00000437681 MCF2P10911 925 aa12.62□□□□□ -0.39
SNHG3-202ENST00000437681 CD52P31358 61 aa12.62□□□□□ -0.39
SNHG3-202ENST00000437681 POSTNQ15063 836 aa12.62□□□□□ -0.39
SNHG3-202ENST00000437681 SPECC1Q5M775 1068 aa12.62□□□□□ -0.39
SNHG3-202ENST00000437681 SLC27A1Q6PCB7 646 aa12.62□□□□□ -0.39
SNHG3-202ENST00000437681 FAM178BQ8IXR5 827 aa12.62□□□□□ -0.39
SNHG3-202ENST00000437681 C12orf56Q8IXR9 622 aa12.62□□□□□ -0.39
SNHG3-202ENST00000437681 TRIML1Q8N9V2 468 aa12.62□□□□□ -0.39
SNHG3-202ENST00000437681 TMEM40Q8WWA1 233 aa12.62□□□□□ -0.39
SNHG3-202ENST00000437681 RNPC3Q96LT9 517 aaKnown RBP12.62□□□□□ -0.39
SNHG3-202ENST00000437681 NLRP4Q96MN2 994 aa12.62□□□□□ -0.39
SNHG3-202ENST00000437681 TTC3P53804 2025 aa12.62□□□□□ -0.39
SNHG3-202ENST00000437681 LRRIQ4A6NIV6 560 aa12.61□□□□□ -0.39
SNHG3-202ENST00000437681 RHOBTB3O94955 611 aa12.61□□□□□ -0.39
SNHG3-202ENST00000437681 DPYDQ12882 1025 aa12.61□□□□□ -0.39
SNHG3-202ENST00000437681 EPM2AIP1Q7L775 607 aaPredicted RBP12.61□□□□□ -0.39
SNHG3-202ENST00000437681 ZNF598Q86UK7 904 aaKnown RBP12.61□□□□□ -0.39
SNHG3-202ENST00000437681 MYCT1Q8N699 235 aa12.61□□□□□ -0.39
SNHG3-202ENST00000437681 ACCSQ96QU6 501 aa12.61□□□□□ -0.39
SNHG3-202ENST00000437681 MRPL9Q9BYD2 267 aaKnown RBP12.61□□□□□ -0.39
SNHG3-202ENST00000437681 GOLPH3LQ9H4A5 285 aa12.61□□□□□ -0.39
SNHG3-202ENST00000437681 CDHR5Q9HBB8 845 aa12.61□□□□□ -0.39
SNHG3-202ENST00000437681 PTPRHQ9HD43 1115 aa12.61□□□□□ -0.39
SNHG3-202ENST00000437681 SERTAD1Q9UHV2 236 aa12.61□□□□□ -0.39
SNHG3-202ENST00000437681 A0A1B0GVL5 298 aa12.61□□□□□ -0.39
SNHG3-202ENST00000437681 KINO60870 393 aaKnown RBP12.61□□□□□ -0.39
SNHG3-202ENST00000437681 SSBP05455 408 aaKnown RBP eCLIP12.61□□□□□ -0.39
SNHG3-202ENST00000437681 SRGAP2CP0DJJ0 459 aa12.61□□□□□ -0.39
SNHG3-202ENST00000437681 HOXA11P31270 313 aaPredicted RBP12.61□□□□□ -0.39
SNHG3-202ENST00000437681 EPHB4P54760 987 aa12.61□□□□□ -0.39
SNHG3-202ENST00000437681 PEX3P56589 373 aa12.61□□□□□ -0.39
SNHG3-202ENST00000437681 MCCD1P59942 119 aaPredicted RBP12.61□□□□□ -0.39
SNHG3-202ENST00000437681 PRPF4BQ13523 1007 aaKnown RBP12.61□□□□□ -0.39
SNHG3-202ENST00000437681 SMYD5Q6GMV2 418 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms