RNA–Protein interactions for RNA: ENST00000437600.8

CUX1-206, Transcript of cut like homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CUX1, Length 3,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-206ENST00000437600 SLC10A4Q96EP9 437 aa10.28□□□□□ -0.76
CUX1-206ENST00000437600 CCDC43Q96MW1 224 aaKnown RBP10.28□□□□□ -0.76
CUX1-206ENST00000437600 GBA2Q9HCG7 927 aaPredicted RBP10.28□□□□□ -0.76
CUX1-206ENST00000437600 UBIAD1Q9Y5Z9 338 aa10.28□□□□□ -0.76
CUX1-206ENST00000437600 EMSYQ7Z589 1322 aa10.28□□□□□ -0.76
CUX1-206ENST00000437600 RPTORQ8N122 1335 aa10.28□□□□□ -0.76
CUX1-206ENST00000437600 ATMINO43313 823 aaPredicted RBP10.28□□□□□ -0.76
CUX1-206ENST00000437600 CYP2C8P10632 490 aa10.28□□□□□ -0.76
CUX1-206ENST00000437600 SSTR3P32745 418 aaPredicted RBP10.28□□□□□ -0.76
CUX1-206ENST00000437600 STAT1P42224 750 aa10.28□□□□□ -0.76
CUX1-206ENST00000437600 ATP1A2P50993 1020 aa10.28□□□□□ -0.76
CUX1-206ENST00000437600 HLTFQ14527 1009 aaKnown RBP eCLIP10.28□□□□□ -0.76
CUX1-206ENST00000437600 C2CD6Q53TS8 623 aa10.28□□□□□ -0.76
CUX1-206ENST00000437600 NOL9Q5SY16 702 aaKnown RBP10.28□□□□□ -0.76
CUX1-206ENST00000437600 CCDC70Q6NSX1 233 aa10.28□□□□□ -0.76
CUX1-206ENST00000437600 MMGT1Q8N4V1 131 aa10.28□□□□□ -0.76
CUX1-206ENST00000437600 RNF10Q8N5U6 811 aaKnown RBP10.28□□□□□ -0.76
CUX1-206ENST00000437600 OR2W6PQ8NHA6 318 aa10.28□□□□□ -0.76
CUX1-206ENST00000437600 ARHGEF26Q96DR7 871 aa10.28□□□□□ -0.76
CUX1-206ENST00000437600 EDEM3Q9BZQ6 932 aa10.28□□□□□ -0.76
CUX1-206ENST00000437600 TUFT1Q9NNX1 390 aa10.28□□□□□ -0.76
CUX1-206ENST00000437600 OLFML3Q9NRN5 406 aa10.28□□□□□ -0.76
CUX1-206ENST00000437600 AMACRQ9UHK6 382 aa10.28□□□□□ -0.76
CUX1-206ENST00000437600 RGS20O76081 388 aa10.27□□□□□ -0.77
CUX1-206ENST00000437600 ITGBL1O95965 494 aaPredicted RBP10.27□□□□□ -0.77
CUX1-206ENST00000437600 LMBRD2Q68DH5 695 aaPredicted RBP10.27□□□□□ -0.77
CUX1-206ENST00000437600 PEX26Q7Z412 305 aa10.27□□□□□ -0.77
CUX1-206ENST00000437600 ERO1BQ86YB8 467 aa10.27□□□□□ -0.77
CUX1-206ENST00000437600 ARHGEF19Q8IW93 802 aa10.27□□□□□ -0.77
CUX1-206ENST00000437600 SLC35G2Q8TBE7 412 aa10.27□□□□□ -0.77
CUX1-206ENST00000437600 PLEKHO2Q8TD55 490 aa10.27□□□□□ -0.77
CUX1-206ENST00000437600 SYN2Q92777 582 aaPredicted RBP10.27□□□□□ -0.77
CUX1-206ENST00000437600 TEX13BQ9BXU2 312 aa10.27□□□□□ -0.77
CUX1-206ENST00000437600 THAP2Q9H0W7 228 aa10.27□□□□□ -0.77
CUX1-206ENST00000437600 BACH1O14867 736 aa10.27□□□□□ -0.77
CUX1-206ENST00000437600 H2AFZP0C0S5 128 aa10.27□□□□□ -0.77
CUX1-206ENST00000437600 HUNKP57058 714 aa10.27□□□□□ -0.77
CUX1-206ENST00000437600 MAP2K1Q02750 393 aaPredicted RBP10.27□□□□□ -0.77
CUX1-206ENST00000437600 XKR9Q5GH70 373 aa10.27□□□□□ -0.77
CUX1-206ENST00000437600 B3GNT9Q6UX72 402 aa10.27□□□□□ -0.77
CUX1-206ENST00000437600 H2AFVQ71UI9 128 aa10.27□□□□□ -0.77
CUX1-206ENST00000437600 NCAPG2Q86XI2 1143 aa10.27□□□□□ -0.77
CUX1-206ENST00000437600 ZC3H3Q8IXZ2 948 aaKnown RBP10.27□□□□□ -0.77
CUX1-206ENST00000437600 C10orf67Q8IYJ2 551 aa10.27□□□□□ -0.77
CUX1-206ENST00000437600 ANKRD35Q8N283 1001 aa10.27□□□□□ -0.77
CUX1-206ENST00000437600 AENQ8WTP8 325 aaKnown RBP10.27□□□□□ -0.77
CUX1-206ENST00000437600 TAF4BQ92750 862 aa10.27□□□□□ -0.77
CUX1-206ENST00000437600 IQCDQ96DY2 449 aa10.27□□□□□ -0.77
CUX1-206ENST00000437600 BTBD6Q96KE9 485 aa10.27□□□□□ -0.77
CUX1-206ENST00000437600 RPGRIP1Q96KN7 1286 aa10.27□□□□□ -0.77
CUX1-206ENST00000437600 RIT2Q99578 217 aa10.27□□□□□ -0.77
CUX1-206ENST00000437600 NUCKS1Q9H1E3 243 aaKnown RBP10.27□□□□□ -0.77
CUX1-206ENST00000437600 TOPORSQ9NS56 1045 aaPredicted RBP10.27□□□□□ -0.77
CUX1-206ENST00000437600 CYP39A1Q9NYL5 469 aa10.27□□□□□ -0.77
CUX1-206ENST00000437600 BTBD7Q9P203 1132 aa10.27□□□□□ -0.77
CUX1-206ENST00000437600 DOCK3Q8IZD9 2030 aa10.26□□□□□ -0.77
CUX1-206ENST00000437600 TARSL2A2RTX5 802 aaKnown RBP10.26□□□□□ -0.77
CUX1-206ENST00000437600 SPDYE5A6NIY4 337 aa10.26□□□□□ -0.77
CUX1-206ENST00000437600 F8VZ95 297 aa10.26□□□□□ -0.77
CUX1-206ENST00000437600 BUB1BO60566 1050 aaPredicted RBP10.26□□□□□ -0.77
CUX1-206ENST00000437600 PRLRP16471 622 aa10.26□□□□□ -0.77
CUX1-206ENST00000437600 YWHABP31946 246 aaKnown RBP10.26□□□□□ -0.77
CUX1-206ENST00000437600 FLT3P36888 993 aa10.26□□□□□ -0.77
CUX1-206ENST00000437600 RARRES1P49788 294 aa10.26□□□□□ -0.77
CUX1-206ENST00000437600 MAP9Q49MG5 647 aa10.26□□□□□ -0.77
CUX1-206ENST00000437600 SEPT14Q6ZU15 432 aa10.26□□□□□ -0.77
CUX1-206ENST00000437600 CBWD2Q8IUF1 395 aa10.26□□□□□ -0.77
CUX1-206ENST00000437600 TPCN2Q8NHX9 752 aa10.26□□□□□ -0.77
CUX1-206ENST00000437600 CASKIN2Q8WXE0 1202 aa10.26□□□□□ -0.77
CUX1-206ENST00000437600 RASSF4Q9H2L5 321 aa10.26□□□□□ -0.77
CUX1-206ENST00000437600 METTL14Q9HCE5 456 aaKnown RBP10.26□□□□□ -0.77
CUX1-206ENST00000437600 PLCB1Q9NQ66 1216 aa10.26□□□□□ -0.77
CUX1-206ENST00000437600 PCDHGC5Q9Y5F6 944 aa10.26□□□□□ -0.77
CUX1-206ENST00000437600 C19orf81C9J6K1 198 aa10.26□□□□□ -0.77
CUX1-206ENST00000437600 ANKRD63C9JTQ0 380 aa10.26□□□□□ -0.77
CUX1-206ENST00000437600 KIF4AO95239 1232 aa10.26□□□□□ -0.77
CUX1-206ENST00000437600 P4HBP07237 508 aaKnown RBP10.26□□□□□ -0.77
CUX1-206ENST00000437600 QARSP47897 775 aaKnown RBP10.26□□□□□ -0.77
CUX1-206ENST00000437600 TUBB4BP68371 445 aa10.26□□□□□ -0.77
CUX1-206ENST00000437600 HAUS6Q7Z4H7 955 aa10.26□□□□□ -0.77
CUX1-206ENST00000437600 TXLNBQ8N3L3 684 aa10.26□□□□□ -0.77
CUX1-206ENST00000437600 EXOC4Q96A65 974 aa10.26□□□□□ -0.77
CUX1-206ENST00000437600 PI4K2AQ9BTU6 479 aa10.26□□□□□ -0.77
CUX1-206ENST00000437600 GPR88Q9GZN0 384 aa10.26□□□□□ -0.77
CUX1-206ENST00000437600 INTS2Q9H0H0 1204 aaKnown RBP10.26□□□□□ -0.77
CUX1-206ENST00000437600 MYH11P35749 1972 aa10.26□□□□□ -0.77
CUX1-206ENST00000437600 DOCK5Q9H7D0 1870 aa10.26□□□□□ -0.77
CUX1-206ENST00000437600 TRIM66O15016 1216 aa10.25□□□□□ -0.77
CUX1-206ENST00000437600 PGK2P07205 417 aa10.25□□□□□ -0.77
CUX1-206ENST00000437600 DLATP10515 647 aaKnown RBP10.25□□□□□ -0.77
CUX1-206ENST00000437600 SOX5P35711 763 aa10.25□□□□□ -0.77
CUX1-206ENST00000437600 JAM2P57087 298 aa10.25□□□□□ -0.77
CUX1-206ENST00000437600 PPATQ06203 517 aa10.25□□□□□ -0.77
CUX1-206ENST00000437600 BFSP1Q12934 665 aa10.25□□□□□ -0.77
CUX1-206ENST00000437600 LDLRAD1Q5T700 205 aa10.25□□□□□ -0.77
CUX1-206ENST00000437600 CYFIP1Q7L576 1253 aa10.25□□□□□ -0.77
CUX1-206ENST00000437600 NLRX1Q86UT6 975 aa10.25□□□□□ -0.77
CUX1-206ENST00000437600 VSIG10LQ86VR7 867 aa10.25□□□□□ -0.77
CUX1-206ENST00000437600 PPM1KQ8N3J5 372 aa10.25□□□□□ -0.77
CUX1-206ENST00000437600 FAM71BQ8TC56 605 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms