RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 NENFQ9UMX5 172 aa27.93■■■□□ 2.06
CPNE1-216ENST00000437340 CETPP11597 493 aa27.92■■■□□ 2.06
CPNE1-216ENST00000437340 SOX10P56693 466 aa27.92■■■□□ 2.06
CPNE1-216ENST00000437340 PPP3CAQ08209 521 aa27.92■■■□□ 2.06
CPNE1-216ENST00000437340 DRAP1Q14919 205 aaPredicted RBP27.92■■■□□ 2.06
CPNE1-216ENST00000437340 SNRNP35Q16560 246 aaKnown RBP27.92■■■□□ 2.06
CPNE1-216ENST00000437340 KIAA0753Q2KHM9 967 aa27.92■■■□□ 2.06
CPNE1-216ENST00000437340 EPC2Q52LR7 807 aa27.92■■■□□ 2.06
CPNE1-216ENST00000437340 MSANTD4Q8NCY6 345 aa27.92■■■□□ 2.06
CPNE1-216ENST00000437340 DHX33Q9H6R0 707 aaKnown RBP27.92■■■□□ 2.06
CPNE1-216ENST00000437340 TXNRD2Q9NNW7 524 aa27.92■■■□□ 2.06
CPNE1-216ENST00000437340 TSKSQ9UJT2 592 aa27.92■■■□□ 2.06
CPNE1-216ENST00000437340 NAGPAQ9UK23 515 aa27.92■■■□□ 2.06
CPNE1-216ENST00000437340 MYH9P35579 1960 aaKnown RBP27.92■■■□□ 2.06
CPNE1-216ENST00000437340 CCL15-CCL14A0A0B4J2E2 113 aa27.91■■■□□ 2.06
CPNE1-216ENST00000437340 GSTTP1A0A1W2PQM5 241 aa27.91■■■□□ 2.06
CPNE1-216ENST00000437340 TFRCP02786 760 aaKnown RBP27.91■■■□□ 2.06
CPNE1-216ENST00000437340 ZBTB48P10074 688 aaPredicted RBP27.91■■■□□ 2.06
CPNE1-216ENST00000437340 GARTP22102 1010 aa27.91■■■□□ 2.06
CPNE1-216ENST00000437340 CCL15Q16663 113 aa27.91■■■□□ 2.06
CPNE1-216ENST00000437340 FAM160B1Q5W0V3 765 aa27.91■■■□□ 2.06
CPNE1-216ENST00000437340 METTL7BQ6UX53 244 aa27.91■■■□□ 2.06
CPNE1-216ENST00000437340 ANKRD13CQ8N6S4 541 aa27.91■■■□□ 2.06
CPNE1-216ENST00000437340 AFAP1L1Q8TED9 768 aa27.91■■■□□ 2.06
CPNE1-216ENST00000437340 PARD6BQ9BYG5 372 aa27.91■■■□□ 2.06
CPNE1-216ENST00000437340 MROH8Q9H579 483 aa27.91■■■□□ 2.06
CPNE1-216ENST00000437340 ADGRA3Q8IWK6 1321 aa27.91■■■□□ 2.06
CPNE1-216ENST00000437340 LOC102724159A0A0B4J2E5 919 aa27.91■■■□□ 2.06
CPNE1-216ENST00000437340 EVI5O60447 810 aa27.91■■■□□ 2.06
CPNE1-216ENST00000437340 TUBBP07437 444 aa27.91■■■□□ 2.06
CPNE1-216ENST00000437340 PWP2Q15269 919 aaKnown RBP27.91■■■□□ 2.06
CPNE1-216ENST00000437340 ALKBH5Q6P6C2 394 aaKnown RBP27.91■■■□□ 2.06
CPNE1-216ENST00000437340 USP37Q86T82 979 aa27.91■■■□□ 2.06
CPNE1-216ENST00000437340 GTF3C2Q8WUA4 911 aaPredicted RBP27.91■■■□□ 2.06
CPNE1-216ENST00000437340 BRI3BPQ8WY22 251 aa27.91■■■□□ 2.06
CPNE1-216ENST00000437340 GPR88Q9GZN0 384 aa27.91■■■□□ 2.06
CPNE1-216ENST00000437340 NRBP2Q9NSY0 501 aa27.91■■■□□ 2.06
CPNE1-216ENST00000437340 DDX41Q9UJV9 622 aaKnown RBP27.91■■■□□ 2.06
CPNE1-216ENST00000437340 INTUQ9ULD6 942 aa27.91■■■□□ 2.06
CPNE1-216ENST00000437340 PPME1Q9Y570 386 aa27.91■■■□□ 2.06
CPNE1-216ENST00000437340 DNAJC25-GNG10A0A024R161 153 aa27.9■■■□□ 2.06
CPNE1-216ENST00000437340 ADRB2P07550 413 aa27.9■■■□□ 2.06
CPNE1-216ENST00000437340 TCP1P17987 556 aaKnown RBP27.9■■■□□ 2.06
CPNE1-216ENST00000437340 KLRC1P26715 233 aa27.9■■■□□ 2.06
CPNE1-216ENST00000437340 RFC5P40937 340 aa27.9■■■□□ 2.06
CPNE1-216ENST00000437340 KCTD2Q14681 263 aa27.9■■■□□ 2.06
CPNE1-216ENST00000437340 SLC39A4Q6P5W5 647 aa27.9■■■□□ 2.06
CPNE1-216ENST00000437340 TMCO3Q6UWJ1 677 aa27.9■■■□□ 2.06
CPNE1-216ENST00000437340 PLEKHO2Q8TD55 490 aa27.9■■■□□ 2.06
CPNE1-216ENST00000437340 TMC2Q8TDI7 906 aa27.9■■■□□ 2.06
CPNE1-216ENST00000437340 SEPT1Q8WYJ6 367 aa27.9■■■□□ 2.06
CPNE1-216ENST00000437340 PORCNQ9H237 461 aa27.9■■■□□ 2.06
CPNE1-216ENST00000437340 HYOU1Q9Y4L1 999 aa27.9■■■□□ 2.06
CPNE1-216ENST00000437340 PCDHGC5Q9Y5F6 944 aa27.9■■■□□ 2.06
CPNE1-216ENST00000437340 SRGAP2O75044 1071 aa27.89■■■□□ 2.06
CPNE1-216ENST00000437340 GCLMP48507 274 aa27.89■■■□□ 2.06
CPNE1-216ENST00000437340 MXI1P50539 228 aa27.89■■■□□ 2.06
CPNE1-216ENST00000437340 PHLDB3Q6NSJ2 640 aa27.89■■■□□ 2.06
CPNE1-216ENST00000437340 CBWD2Q8IUF1 395 aa27.89■■■□□ 2.06
CPNE1-216ENST00000437340 ZSWIM2Q8NEG5 633 aa27.89■■■□□ 2.06
CPNE1-216ENST00000437340 SHCBP1Q8NEM2 672 aa27.89■■■□□ 2.06
CPNE1-216ENST00000437340 MFSD14AQ96MC6 490 aa27.89■■■□□ 2.06
CPNE1-216ENST00000437340 CEP89Q96ST8 783 aa27.89■■■□□ 2.06
CPNE1-216ENST00000437340 EPC1Q9H2F5 836 aa27.89■■■□□ 2.06
CPNE1-216ENST00000437340 LRRC37A2A6NM11 1700 aa27.89■■■□□ 2.06
CPNE1-216ENST00000437340 BTBD19C9JJ37 291 aa27.88■■■□□ 2.05
CPNE1-216ENST00000437340 NAP1L1P55209 391 aaKnown RBP27.88■■■□□ 2.05
CPNE1-216ENST00000437340 Q3C1V9 767 aa27.88■■■□□ 2.05
CPNE1-216ENST00000437340 SLC7A3Q8WY07 619 aa27.88■■■□□ 2.05
CPNE1-216ENST00000437340 FGD4Q96M96 766 aa27.88■■■□□ 2.05
CPNE1-216ENST00000437340 PCYT2Q99447 389 aa27.88■■■□□ 2.05
CPNE1-216ENST00000437340 MMP19Q99542 508 aa27.88■■■□□ 2.05
CPNE1-216ENST00000437340 TMEM117Q9H0C3 514 aa27.88■■■□□ 2.05
CPNE1-216ENST00000437340 ANKZF1Q9H8Y5 726 aa27.88■■■□□ 2.05
CPNE1-216ENST00000437340 GOLGA8IPA6NC78 632 aa27.88■■■□□ 2.05
CPNE1-216ENST00000437340 GOLGA8JA6NMD2 632 aa27.88■■■□□ 2.05
CPNE1-216ENST00000437340 HNRNPDLO14979 420 aaKnown RBP27.88■■■□□ 2.05
CPNE1-216ENST00000437340 BUB1O43683 1085 aa27.88■■■□□ 2.05
CPNE1-216ENST00000437340 GGPS1O95749 300 aa27.88■■■□□ 2.05
CPNE1-216ENST00000437340 GTF2H1P32780 548 aa27.88■■■□□ 2.05
CPNE1-216ENST00000437340 ARL2P36404 184 aa27.88■■■□□ 2.05
CPNE1-216ENST00000437340 NAMPTP43490 491 aa27.88■■■□□ 2.05
CPNE1-216ENST00000437340 STAT5BP51692 787 aa27.88■■■□□ 2.05
CPNE1-216ENST00000437340 BRD3Q15059 726 aa27.88■■■□□ 2.05
CPNE1-216ENST00000437340 TAS1R3Q7RTX0 852 aa27.88■■■□□ 2.05
CPNE1-216ENST00000437340 SAPCD2Q86UD0 394 aa27.88■■■□□ 2.05
CPNE1-216ENST00000437340 RASAL3Q86YV0 1011 aa27.88■■■□□ 2.05
CPNE1-216ENST00000437340 PARD3BQ8TEW8 1205 aa27.88■■■□□ 2.05
CPNE1-216ENST00000437340 POMGNT1Q8WZA1 660 aa27.88■■■□□ 2.05
CPNE1-216ENST00000437340 MMS19Q96T76 1030 aa27.88■■■□□ 2.05
CPNE1-216ENST00000437340 ZNF446Q9NWS9 450 aa27.88■■■□□ 2.05
CPNE1-216ENST00000437340 RAB21Q9UL25 225 aa27.88■■■□□ 2.05
CPNE1-216ENST00000437340 PNMA3Q9UL41 463 aa27.88■■■□□ 2.05
CPNE1-216ENST00000437340 CCDC151A5D8V7 595 aa27.87■■■□□ 2.05
CPNE1-216ENST00000437340 CYP2C8P10632 490 aa27.87■■■□□ 2.05
CPNE1-216ENST00000437340 TARBP2Q15633 366 aaKnown RBP27.87■■■□□ 2.05
CPNE1-216ENST00000437340 IFI16Q16666 785 aaKnown RBP27.87■■■□□ 2.05
CPNE1-216ENST00000437340 ZNF572Q7Z3I7 529 aaPredicted RBP27.87■■■□□ 2.05
CPNE1-216ENST00000437340 SLC30A5Q8TAD4 765 aa27.87■■■□□ 2.05
CPNE1-216ENST00000437340 MORC4Q8TE76 937 aa27.87■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms