RNA–Protein interactions for RNA: ENST00000437201.5

SBDSP1-203, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 1 (best)

Gene SBDSP1, Length 839 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-203ENST00000437201 SMRP1Q8NCR6 262 aa19.5■□□□□ 0.71
SBDSP1-203ENST00000437201 MCPH1Q8NEM0 835 aa19.5■□□□□ 0.71
SBDSP1-203ENST00000437201 PIGOQ8TEQ8 1089 aa19.5■□□□□ 0.71
SBDSP1-203ENST00000437201 NFKBIZQ9BYH8 718 aa19.5■□□□□ 0.71
SBDSP1-203ENST00000437201 TBC1D13Q9NVG8 400 aa19.5■□□□□ 0.71
SBDSP1-203ENST00000437201 DBR1Q9UK59 544 aaKnown RBP19.5■□□□□ 0.71
SBDSP1-203ENST00000437201 INPP5FQ9Y2H2 1132 aa19.5■□□□□ 0.71
SBDSP1-203ENST00000437201 STK24Q9Y6E0 443 aa19.5■□□□□ 0.71
SBDSP1-203ENST00000437201 PLXNA4Q9HCM2 1894 aa19.5■□□□□ 0.71
SBDSP1-203ENST00000437201 ATG2AQ2TAZ0 1938 aa19.49■□□□□ 0.71
SBDSP1-203ENST00000437201 C19orf67A6NJJ6 358 aa19.49■□□□□ 0.71
SBDSP1-203ENST00000437201 INO80B-WBP1J3KQ70 363 aa19.49■□□□□ 0.71
SBDSP1-203ENST00000437201 MUTP22033 750 aa19.49■□□□□ 0.71
SBDSP1-203ENST00000437201 RPA1P27694 616 aa19.49■□□□□ 0.71
SBDSP1-203ENST00000437201 GIT2Q14161 759 aa19.49■□□□□ 0.71
SBDSP1-203ENST00000437201 LONRF3Q496Y0 759 aa19.49■□□□□ 0.71
SBDSP1-203ENST00000437201 HAUS3Q68CZ6 603 aa19.49■□□□□ 0.71
SBDSP1-203ENST00000437201 TMEM184AQ6ZMB5 413 aa19.49■□□□□ 0.71
SBDSP1-203ENST00000437201 CATSPER3Q86XQ3 398 aa19.49■□□□□ 0.71
SBDSP1-203ENST00000437201 HACE1Q8IYU2 909 aa19.49■□□□□ 0.71
SBDSP1-203ENST00000437201 MRPL43Q8N983 215 aaKnown RBP19.49■□□□□ 0.71
SBDSP1-203ENST00000437201 TMEM87AQ8NBN3 555 aa19.49■□□□□ 0.71
SBDSP1-203ENST00000437201 FAM193BQ96PV7 902 aaPredicted RBP19.49■□□□□ 0.71
SBDSP1-203ENST00000437201 RSAD1Q9HA92 442 aa19.49■□□□□ 0.71
SBDSP1-203ENST00000437201 BARX2Q9UMQ3 279 aaPredicted RBP19.49■□□□□ 0.71
SBDSP1-203ENST00000437201 GPR37L1O60883 481 aa19.48■□□□□ 0.71
SBDSP1-203ENST00000437201 GLP2RO95838 553 aa19.48■□□□□ 0.71
SBDSP1-203ENST00000437201 SPATA31C1P0DKV0 1188 aa19.48■□□□□ 0.71
SBDSP1-203ENST00000437201 NCLP19338 710 aaKnown RBP19.48■□□□□ 0.71
SBDSP1-203ENST00000437201 RAB34Q9BZG1 259 aa19.48■□□□□ 0.71
SBDSP1-203ENST00000437201 NT5C1B-RDH14C9J2C7 533 aa19.47■□□□□ 0.71
SBDSP1-203ENST00000437201 TSPAN1O60635 241 aa19.47■□□□□ 0.71
SBDSP1-203ENST00000437201 USO1O60763 962 aaKnown RBP19.47■□□□□ 0.71
SBDSP1-203ENST00000437201 GALTP07902 379 aa19.47■□□□□ 0.71
SBDSP1-203ENST00000437201 ITGA4P13612 1032 aa19.47■□□□□ 0.71
SBDSP1-203ENST00000437201 HOXB8P17481 243 aaPredicted RBP19.47■□□□□ 0.71
SBDSP1-203ENST00000437201 U2AF2P26368 475 aaKnown RBP eCLIP19.47■□□□□ 0.71
SBDSP1-203ENST00000437201 CAPSQ13938 189 aa19.47■□□□□ 0.71
SBDSP1-203ENST00000437201 AGMOQ6ZNB7 445 aa19.47■□□□□ 0.71
SBDSP1-203ENST00000437201 DDX53Q86TM3 631 aaKnown RBP19.47■□□□□ 0.71
SBDSP1-203ENST00000437201 IGSF21Q96ID5 467 aa19.47■□□□□ 0.71
SBDSP1-203ENST00000437201 TRIM6Q9C030 488 aaPredicted RBP19.47■□□□□ 0.71
SBDSP1-203ENST00000437201 CSRNP2Q9H175 543 aa19.47■□□□□ 0.71
SBDSP1-203ENST00000437201 POLR3FQ9H1D9 316 aaPredicted RBP19.47■□□□□ 0.71
SBDSP1-203ENST00000437201 NRDE2Q9H7Z3 1164 aa19.47■□□□□ 0.71
SBDSP1-203ENST00000437201 MEIS3P2A8K0S8 358 aa19.46■□□□□ 0.71
SBDSP1-203ENST00000437201 HIDE1A8MVS5 230 aa19.46■□□□□ 0.71
SBDSP1-203ENST00000437201 DCXO43602 365 aa19.46■□□□□ 0.71
SBDSP1-203ENST00000437201 MED24O75448 989 aa19.46■□□□□ 0.71
SBDSP1-203ENST00000437201 CXCL14O95715 111 aa19.46■□□□□ 0.71
SBDSP1-203ENST00000437201 ALDH2P05091 517 aa19.46■□□□□ 0.71
SBDSP1-203ENST00000437201 GLRA2P23416 452 aa19.46■□□□□ 0.71
SBDSP1-203ENST00000437201 CA8P35219 290 aa19.46■□□□□ 0.71
SBDSP1-203ENST00000437201 MCM2P49736 904 aa19.46■□□□□ 0.71
SBDSP1-203ENST00000437201 FXR2P51116 673 aaKnown RBP eCLIP19.46■□□□□ 0.71
SBDSP1-203ENST00000437201 MBTD1Q05BQ5 628 aa19.46■□□□□ 0.71
SBDSP1-203ENST00000437201 PDIA5Q14554 519 aa19.46■□□□□ 0.71
SBDSP1-203ENST00000437201 UBXN11Q5T124 520 aa19.46■□□□□ 0.71
SBDSP1-203ENST00000437201 VPS52Q8N1B4 723 aa19.46■□□□□ 0.71
SBDSP1-203ENST00000437201 ASAP3Q8TDY4 903 aa19.46■□□□□ 0.71
SBDSP1-203ENST00000437201 CASP10Q92851 521 aa19.46■□□□□ 0.71
SBDSP1-203ENST00000437201 KHSRPQ92945 711 aaKnown RBP eCLIP19.46■□□□□ 0.71
SBDSP1-203ENST00000437201 TMEM175Q9BSA9 504 aa19.46■□□□□ 0.71
SBDSP1-203ENST00000437201 GBP3Q9H0R5 595 aa19.46■□□□□ 0.71
SBDSP1-203ENST00000437201 DAXXQ9UER7 740 aaPredicted RBP19.46■□□□□ 0.71
SBDSP1-203ENST00000437201 ARHGEF35A5YM69 484 aa19.45■□□□□ 0.7
SBDSP1-203ENST00000437201 C2orf71A6NGG8 1288 aa19.45■□□□□ 0.7
SBDSP1-203ENST00000437201 LRRIQ4A6NIV6 560 aa19.45■□□□□ 0.7
SBDSP1-203ENST00000437201 LAD1O00515 517 aa19.45■□□□□ 0.7
SBDSP1-203ENST00000437201 KCNC3Q14003 757 aa19.45■□□□□ 0.7
SBDSP1-203ENST00000437201 TPRNQ4KMQ1 711 aa19.45■□□□□ 0.7
SBDSP1-203ENST00000437201 ANKRD54Q6NXT1 300 aa19.45■□□□□ 0.7
SBDSP1-203ENST00000437201 ZBTB8OSQ8IWT0 167 aa19.45■□□□□ 0.7
SBDSP1-203ENST00000437201 PRIMPOLQ96LW4 560 aa19.45■□□□□ 0.7
SBDSP1-203ENST00000437201 LRFN3Q9BTN0 628 aa19.45■□□□□ 0.7
SBDSP1-203ENST00000437201 C2orf40Q9H1Z8 148 aa19.45■□□□□ 0.7
SBDSP1-203ENST00000437201 LRWD1Q9UFC0 647 aa19.45■□□□□ 0.7
SBDSP1-203ENST00000437201 USP15Q9Y4E8 981 aaPredicted RBP19.45■□□□□ 0.7
SBDSP1-203ENST00000437201 IPPQ9Y573 584 aa19.45■□□□□ 0.7
SBDSP1-203ENST00000437201 IRAK3Q9Y616 596 aa19.45■□□□□ 0.7
SBDSP1-203ENST00000437201 ARID2Q68CP9 1835 aa19.44■□□□□ 0.7
SBDSP1-203ENST00000437201 NR1I2O75469 434 aa19.44■□□□□ 0.7
SBDSP1-203ENST00000437201 ARF4P18085 180 aaPredicted RBP19.44■□□□□ 0.7
SBDSP1-203ENST00000437201 CCT6AP40227 531 aaKnown RBP19.44■□□□□ 0.7
SBDSP1-203ENST00000437201 PADI6Q6TGC4 694 aa19.44■□□□□ 0.7
SBDSP1-203ENST00000437201 MAEAQ7L5Y9 396 aa19.44■□□□□ 0.7
SBDSP1-203ENST00000437201 SMG8Q8ND04 991 aaKnown RBP19.44■□□□□ 0.7
SBDSP1-203ENST00000437201 VN1R2Q8NFZ6 395 aa19.44■□□□□ 0.7
SBDSP1-203ENST00000437201 CPB2Q96IY4 423 aa19.44■□□□□ 0.7
SBDSP1-203ENST00000437201 PHF7Q9BWX1 381 aaPredicted RBP19.44■□□□□ 0.7
SBDSP1-203ENST00000437201 ZBP1Q9H171 429 aa19.44■□□□□ 0.7
SBDSP1-203ENST00000437201 PRMT7Q9NVM4 692 aaPredicted RBP19.44■□□□□ 0.7
SBDSP1-203ENST00000437201 FAN1Q9Y2M0 1017 aa19.44■□□□□ 0.7
SBDSP1-203ENST00000437201 GIT1Q9Y2X7 761 aa19.44■□□□□ 0.7
SBDSP1-203ENST00000437201 A0A087WWV3 80 aa19.43■□□□□ 0.7
SBDSP1-203ENST00000437201 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.43■□□□□ 0.7
SBDSP1-203ENST00000437201 CTSAP10619 480 aa19.43■□□□□ 0.7
SBDSP1-203ENST00000437201 CYP11B2P19099 503 aa19.43■□□□□ 0.7
SBDSP1-203ENST00000437201 SLC11A1P49279 550 aa19.43■□□□□ 0.7
SBDSP1-203ENST00000437201 PPP2R5AQ15172 486 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms