RNA–Protein interactions for RNA: ENST00000436461.6

CALD1-209, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 1,614 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-209ENST00000436461 ST3GAL5Q9UNP4 418 aa18.45■□□□□ 0.54
CALD1-209ENST00000436461 TNRC18O15417 2968 aaPredicted RBP18.45■□□□□ 0.54
CALD1-209ENST00000436461 TSPAN1O60635 241 aa18.45■□□□□ 0.54
CALD1-209ENST00000436461 EFNA5P52803 228 aa18.45■□□□□ 0.54
CALD1-209ENST00000436461 TARS2Q9BW92 718 aaKnown RBP18.45■□□□□ 0.54
CALD1-209ENST00000436461 KCNG1Q9UIX4 513 aa18.45■□□□□ 0.54
CALD1-209ENST00000436461 PADI3Q9ULW8 664 aa18.45■□□□□ 0.54
CALD1-209ENST00000436461 PCDHB13Q9Y5F0 798 aa18.45■□□□□ 0.54
CALD1-209ENST00000436461 ZMYM2Q9UBW7 1377 aa18.44■□□□□ 0.54
CALD1-209ENST00000436461 ERLIN2O94905 339 aa18.44■□□□□ 0.54
CALD1-209ENST00000436461 CSF2RAP15509 400 aa18.44■□□□□ 0.54
CALD1-209ENST00000436461 SFPQP23246 707 aaKnown RBP eCLIP18.44■□□□□ 0.54
CALD1-209ENST00000436461 STRN3Q13033 797 aa18.44■□□□□ 0.54
CALD1-209ENST00000436461 PAK2Q13177 524 aa18.44■□□□□ 0.54
CALD1-209ENST00000436461 TCTN1Q2MV58 587 aa18.44■□□□□ 0.54
CALD1-209ENST00000436461 L1TD1Q5T7N2 865 aaKnown RBP18.44■□□□□ 0.54
CALD1-209ENST00000436461 KLHL10Q6JEL2 608 aa18.44■□□□□ 0.54
CALD1-209ENST00000436461 SASS6Q6UVJ0 657 aa18.44■□□□□ 0.54
CALD1-209ENST00000436461 TSHZ1Q6ZSZ6 1077 aa18.44■□□□□ 0.54
CALD1-209ENST00000436461 MAP4K3Q8IVH8 894 aa18.44■□□□□ 0.54
CALD1-209ENST00000436461 MYOCDQ8IZQ8 938 aa18.44■□□□□ 0.54
CALD1-209ENST00000436461 ZNF710Q8N1W2 664 aa18.44■□□□□ 0.54
CALD1-209ENST00000436461 TRIML1Q8N9V2 468 aa18.44■□□□□ 0.54
CALD1-209ENST00000436461 ZNF507Q8TCN5 953 aa18.44■□□□□ 0.54
CALD1-209ENST00000436461 BADQ92934 168 aa18.44■□□□□ 0.54
CALD1-209ENST00000436461 VWCEQ96DN2 955 aa18.44■□□□□ 0.54
CALD1-209ENST00000436461 IFIH1Q9BYX4 1025 aaKnown RBP18.44■□□□□ 0.54
CALD1-209ENST00000436461 PRMT7Q9NVM4 692 aaPredicted RBP18.44■□□□□ 0.54
CALD1-209ENST00000436461 H0YCG3 227 aa18.43■□□□□ 0.54
CALD1-209ENST00000436461 EIF3DO15371 548 aaKnown RBP eCLIP18.43■□□□□ 0.54
CALD1-209ENST00000436461 ARF4P18085 180 aaPredicted RBP18.43■□□□□ 0.54
CALD1-209ENST00000436461 NLRP12P59046 1061 aa18.43■□□□□ 0.54
CALD1-209ENST00000436461 PRPF4BQ13523 1007 aaKnown RBP18.43■□□□□ 0.54
CALD1-209ENST00000436461 SLC17A8Q8NDX2 589 aa18.43■□□□□ 0.54
CALD1-209ENST00000436461 BICD1Q96G01 975 aa18.43■□□□□ 0.54
CALD1-209ENST00000436461 ERVK-5Q9HDB9 667 aa18.43■□□□□ 0.54
CALD1-209ENST00000436461 PIN4Q9Y237 131 aaKnown RBP18.43■□□□□ 0.54
CALD1-209ENST00000436461 PPP1R3GB7ZBB8 358 aa18.42■□□□□ 0.54
CALD1-209ENST00000436461 ANKRD63C9JTQ0 380 aa18.42■□□□□ 0.54
CALD1-209ENST00000436461 ACKR2O00590 384 aa18.42■□□□□ 0.54
CALD1-209ENST00000436461 ACRP10323 421 aa18.42■□□□□ 0.54
CALD1-209ENST00000436461 FAM187BQ17R55 369 aa18.42■□□□□ 0.54
CALD1-209ENST00000436461 TMEM132AQ24JP5 1023 aa18.42■□□□□ 0.54
CALD1-209ENST00000436461 MFSD5Q6N075 450 aa18.42■□□□□ 0.54
CALD1-209ENST00000436461 SLC39A4Q6P5W5 647 aa18.42■□□□□ 0.54
CALD1-209ENST00000436461 STXBP4Q6ZWJ1 553 aa18.42■□□□□ 0.54
CALD1-209ENST00000436461 SYCP3Q8IZU3 236 aa18.42■□□□□ 0.54
CALD1-209ENST00000436461 DBF4BQ8NFT6 615 aa18.42■□□□□ 0.54
CALD1-209ENST00000436461 ZBTB45Q96K62 511 aaPredicted RBP18.42■□□□□ 0.54
CALD1-209ENST00000436461 ACCSQ96QU6 501 aa18.42■□□□□ 0.54
CALD1-209ENST00000436461 TMX1Q9H3N1 280 aa18.42■□□□□ 0.54
CALD1-209ENST00000436461 AGPAT5Q9NUQ2 364 aa18.42■□□□□ 0.54
CALD1-209ENST00000436461 HNRNPDLO14979 420 aaKnown RBP18.41■□□□□ 0.54
CALD1-209ENST00000436461 GPR182O15218 404 aa18.41■□□□□ 0.54
CALD1-209ENST00000436461 MGEA5O60502 916 aa18.41■□□□□ 0.54
CALD1-209ENST00000436461 HOXA11P31270 313 aaPredicted RBP18.41■□□□□ 0.54
CALD1-209ENST00000436461 TYRO3Q06418 890 aa18.41■□□□□ 0.54
CALD1-209ENST00000436461 BMT2Q1RMZ1 405 aa18.41■□□□□ 0.54
CALD1-209ENST00000436461 EEF1DP3Q658K8 133 aa18.41■□□□□ 0.54
CALD1-209ENST00000436461 PPP4R3CPQ6ZMV5 832 aa18.41■□□□□ 0.54
CALD1-209ENST00000436461 ADSSL1Q8N142 457 aa18.41■□□□□ 0.54
CALD1-209ENST00000436461 ACO2Q99798 780 aaKnown RBP18.41■□□□□ 0.54
CALD1-209ENST00000436461 MRPL4Q9BYD3 311 aaKnown RBP18.41■□□□□ 0.54
CALD1-209ENST00000436461 CNTNAP2Q9UHC6 1331 aa18.41■□□□□ 0.54
CALD1-209ENST00000436461 TRIM49BA6NDI0 452 aa18.41■□□□□ 0.54
CALD1-209ENST00000436461 TGFB1I1O43294 461 aa18.41■□□□□ 0.54
CALD1-209ENST00000436461 IBSPP21815 317 aaPredicted RBP18.41■□□□□ 0.54
CALD1-209ENST00000436461 LIG4P49917 911 aa18.41■□□□□ 0.54
CALD1-209ENST00000436461 PMS1P54277 932 aaKnown RBP18.41■□□□□ 0.54
CALD1-209ENST00000436461 ALCAMQ13740 583 aa18.41■□□□□ 0.54
CALD1-209ENST00000436461 KNOP1Q1ED39 458 aaKnown RBP18.41■□□□□ 0.54
CALD1-209ENST00000436461 PLEKHG4Q58EX7 1191 aa18.41■□□□□ 0.54
CALD1-209ENST00000436461 ATF7IP2Q5U623 682 aa18.41■□□□□ 0.54
CALD1-209ENST00000436461 C11orf57Q6ZUT1 292 aaPredicted RBP18.41■□□□□ 0.54
CALD1-209ENST00000436461 GUF1Q8N442 669 aaKnown RBP18.41■□□□□ 0.54
CALD1-209ENST00000436461 USP38Q8NB14 1042 aa18.41■□□□□ 0.54
CALD1-209ENST00000436461 KCNN1Q92952 543 aa18.41■□□□□ 0.54
CALD1-209ENST00000436461 HVCN1Q96D96 273 aa18.41■□□□□ 0.54
CALD1-209ENST00000436461 PRIMPOLQ96LW4 560 aa18.41■□□□□ 0.54
CALD1-209ENST00000436461 FUCA2Q9BTY2 467 aa18.41■□□□□ 0.54
CALD1-209ENST00000436461 HAPLN2Q9GZV7 340 aa18.41■□□□□ 0.54
CALD1-209ENST00000436461 KCTD10Q9H3F6 313 aa18.41■□□□□ 0.54
CALD1-209ENST00000436461 SEMA6BQ9H3T3 888 aa18.41■□□□□ 0.54
CALD1-209ENST00000436461 ANKFY1Q9P2R3 1169 aa18.41■□□□□ 0.54
CALD1-209ENST00000436461 CTNND2Q9UQB3 1225 aa18.41■□□□□ 0.54
CALD1-209ENST00000436461 SQORQ9Y6N5 450 aa18.41■□□□□ 0.54
CALD1-209ENST00000436461 UBE4BO95155 1302 aa18.4■□□□□ 0.54
CALD1-209ENST00000436461 CLIC2O15247 247 aa18.4■□□□□ 0.54
CALD1-209ENST00000436461 CXCL10P02778 98 aa18.4■□□□□ 0.54
CALD1-209ENST00000436461 HARSP12081 509 aaKnown RBP18.4■□□□□ 0.54
CALD1-209ENST00000436461 STX17P56962 302 aa18.4■□□□□ 0.54
CALD1-209ENST00000436461 ZBTB33Q86T24 672 aa18.4■□□□□ 0.54
CALD1-209ENST00000436461 TMEM199Q8N511 208 aa18.4■□□□□ 0.54
CALD1-209ENST00000436461 DNAJC25Q9H1X3 360 aa18.4■□□□□ 0.54
CALD1-209ENST00000436461 PDZD7Q9H5P4 517 aa18.4■□□□□ 0.54
CALD1-209ENST00000436461 MICAL3Q7RTP6 2002 aa18.39■□□□□ 0.53
CALD1-209ENST00000436461 LETM1O95202 739 aaPredicted RBP18.39■□□□□ 0.53
CALD1-209ENST00000436461 STX1AQ16623 288 aa18.39■□□□□ 0.53
CALD1-209ENST00000436461 ZSWIM2Q8NEG5 633 aa18.39■□□□□ 0.53
CALD1-209ENST00000436461 LINC01599Q8WXQ3 324 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms