RNA–Protein interactions for RNA: ENST00000435201.5

LIMK1-203, Transcript of LIM domain kinase 1, humanhuman

TSL 1 (best)

Gene LIMK1, Length 1,883 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-203ENST00000435201 ZMYND15Q9H091 742 aa18.12■□□□□ 0.49
LIMK1-203ENST00000435201 SUCLA2Q9P2R7 463 aaPredicted RBP18.12■□□□□ 0.49
LIMK1-203ENST00000435201 LCTP09848 1927 aa18.12■□□□□ 0.49
LIMK1-203ENST00000435201 H0YCG3 227 aa18.12■□□□□ 0.49
LIMK1-203ENST00000435201 FOXN3O00409 490 aaPredicted RBP18.12■□□□□ 0.49
LIMK1-203ENST00000435201 EPHB4P54760 987 aa18.12■□□□□ 0.49
LIMK1-203ENST00000435201 SWSAP1Q6NVH7 229 aa18.12■□□□□ 0.49
LIMK1-203ENST00000435201 MIS18BP1Q6P0N0 1132 aa18.12■□□□□ 0.49
LIMK1-203ENST00000435201 EMBQ6PCB8 327 aa18.12■□□□□ 0.49
LIMK1-203ENST00000435201 USP37Q86T82 979 aa18.12■□□□□ 0.49
LIMK1-203ENST00000435201 GSPT2Q8IYD1 628 aaKnown RBP18.12■□□□□ 0.49
LIMK1-203ENST00000435201 CHST13Q8NET6 341 aa18.12■□□□□ 0.49
LIMK1-203ENST00000435201 CALR3Q96L12 384 aaKnown RBP18.12■□□□□ 0.49
LIMK1-203ENST00000435201 AGPAT1Q99943 283 aa18.12■□□□□ 0.49
LIMK1-203ENST00000435201 TMEM117Q9H0C3 514 aa18.12■□□□□ 0.49
LIMK1-203ENST00000435201 KCNG1Q9UIX4 513 aa18.12■□□□□ 0.49
LIMK1-203ENST00000435201 DOCK5Q9H7D0 1870 aa18.11■□□□□ 0.49
LIMK1-203ENST00000435201 LRRN2O75325 713 aa18.11■□□□□ 0.49
LIMK1-203ENST00000435201 ADRB2P07550 413 aa18.11■□□□□ 0.49
LIMK1-203ENST00000435201 CNGA1P29973 690 aa18.11■□□□□ 0.49
LIMK1-203ENST00000435201 ACTR2P61160 394 aa18.11■□□□□ 0.49
LIMK1-203ENST00000435201 ENPEPQ07075 957 aa18.11■□□□□ 0.49
LIMK1-203ENST00000435201 R3HDM1Q15032 1099 aaKnown RBP18.11■□□□□ 0.49
LIMK1-203ENST00000435201 ABHD15Q6UXT9 468 aa18.11■□□□□ 0.49
LIMK1-203ENST00000435201 ARHGEF19Q8IW93 802 aa18.11■□□□□ 0.49
LIMK1-203ENST00000435201 IFT20Q8IY31 132 aa18.11■□□□□ 0.49
LIMK1-203ENST00000435201 DNERQ8NFT8 737 aa18.11■□□□□ 0.49
LIMK1-203ENST00000435201 PLEKHO2Q8TD55 490 aa18.11■□□□□ 0.49
LIMK1-203ENST00000435201 ATP6V0A4Q9HBG4 840 aa18.11■□□□□ 0.49
LIMK1-203ENST00000435201 SEPT9Q9UHD8 586 aaPredicted RBP18.11■□□□□ 0.49
LIMK1-203ENST00000435201 STXBP5LQ9Y2K9 1186 aa18.11■□□□□ 0.49
LIMK1-203ENST00000435201 IGSF9BQ9UPX0 1349 aa18.11■□□□□ 0.49
LIMK1-203ENST00000435201 ANKRD62A6NC57 917 aa18.1■□□□□ 0.49
LIMK1-203ENST00000435201 ANKRD63C9JTQ0 380 aa18.1■□□□□ 0.49
LIMK1-203ENST00000435201 ADSSP30520 456 aa18.1■□□□□ 0.49
LIMK1-203ENST00000435201 CYP2C19P33261 490 aa18.1■□□□□ 0.49
LIMK1-203ENST00000435201 SLC7A5Q01650 507 aa18.1■□□□□ 0.49
LIMK1-203ENST00000435201 PRKCEQ02156 737 aa18.1■□□□□ 0.49
LIMK1-203ENST00000435201 DAAM2Q86T65 1068 aa18.1■□□□□ 0.49
LIMK1-203ENST00000435201 DNAAF5Q86Y56 855 aa18.1■□□□□ 0.49
LIMK1-203ENST00000435201 ZSWIM2Q8NEG5 633 aa18.1■□□□□ 0.49
LIMK1-203ENST00000435201 BSNDQ8WZ55 320 aa18.1■□□□□ 0.49
LIMK1-203ENST00000435201 EXOC4Q96A65 974 aa18.1■□□□□ 0.49
LIMK1-203ENST00000435201 PDLIM7Q9NR12 457 aa18.1■□□□□ 0.49
LIMK1-203ENST00000435201 CYP26B1Q9NR63 512 aa18.1■□□□□ 0.49
LIMK1-203ENST00000435201 TMEM59LQ9UK28 342 aa18.1■□□□□ 0.49
LIMK1-203ENST00000435201 A0A0G2JMZ2 1700 aa18.1■□□□□ 0.49
LIMK1-203ENST00000435201 SUPT20HL2P0C7V6 817 aa18.09■□□□□ 0.49
LIMK1-203ENST00000435201 GTF2H1P32780 548 aa18.09■□□□□ 0.49
LIMK1-203ENST00000435201 ICAM3P32942 547 aa18.09■□□□□ 0.49
LIMK1-203ENST00000435201 STXBP2Q15833 593 aa18.09■□□□□ 0.49
LIMK1-203ENST00000435201 KRT39Q6A163 491 aa18.09■□□□□ 0.49
LIMK1-203ENST00000435201 CBWD2Q8IUF1 395 aa18.09■□□□□ 0.49
LIMK1-203ENST00000435201 CCDC60Q8IWA6 550 aaPredicted RBP18.09■□□□□ 0.49
LIMK1-203ENST00000435201 TMC2Q8TDI7 906 aa18.09■□□□□ 0.49
LIMK1-203ENST00000435201 IFT74Q96LB3 600 aa18.09■□□□□ 0.49
LIMK1-203ENST00000435201 FBXL18Q96ME1 805 aa18.09■□□□□ 0.49
LIMK1-203ENST00000435201 KIFC3Q9BVG8 833 aa18.09■□□□□ 0.49
LIMK1-203ENST00000435201 TMEM8AQ9HCN3 771 aa18.09■□□□□ 0.49
LIMK1-203ENST00000435201 GDF3Q9NR23 364 aa18.09■□□□□ 0.49
LIMK1-203ENST00000435201 SEPT11Q9NVA2 429 aaKnown RBP18.09■□□□□ 0.49
LIMK1-203ENST00000435201 PSD3Q9NYI0 1048 aa18.09■□□□□ 0.49
LIMK1-203ENST00000435201 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.09■□□□□ 0.49
LIMK1-203ENST00000435201 VPS18Q9P253 973 aa18.09■□□□□ 0.49
LIMK1-203ENST00000435201 MYH9P35579 1960 aaKnown RBP18.09■□□□□ 0.49
LIMK1-203ENST00000435201 GOLGA8IPA6NC78 632 aa18.09■□□□□ 0.49
LIMK1-203ENST00000435201 GOLGA8JA6NMD2 632 aa18.09■□□□□ 0.49
LIMK1-203ENST00000435201 TMCO5BA8MYB1 307 aa18.09■□□□□ 0.49
LIMK1-203ENST00000435201 PGRMC1O00264 195 aaKnown RBP18.09■□□□□ 0.49
LIMK1-203ENST00000435201 SCP2P22307 547 aa18.09■□□□□ 0.49
LIMK1-203ENST00000435201 HIRAP54198 1017 aaPredicted RBP18.09■□□□□ 0.49
LIMK1-203ENST00000435201 NNTQ13423 1086 aa18.09■□□□□ 0.49
LIMK1-203ENST00000435201 XKR3Q5GH77 459 aa18.09■□□□□ 0.49
LIMK1-203ENST00000435201 NT5DC3Q86UY8 548 aa18.09■□□□□ 0.49
LIMK1-203ENST00000435201 SLC35G2Q8TBE7 412 aa18.09■□□□□ 0.49
LIMK1-203ENST00000435201 CAVIN3Q969G5 261 aa18.09■□□□□ 0.49
LIMK1-203ENST00000435201 MFSD14AQ96MC6 490 aa18.09■□□□□ 0.49
LIMK1-203ENST00000435201 GOLPH3Q9H4A6 298 aa18.09■□□□□ 0.49
LIMK1-203ENST00000435201 AMFRQ9UKV5 643 aa18.09■□□□□ 0.49
LIMK1-203ENST00000435201 COQ4Q9Y3A0 265 aa18.09■□□□□ 0.49
LIMK1-203ENST00000435201 PTPRFP10586 1907 aa18.09■□□□□ 0.49
LIMK1-203ENST00000435201 PFASO15067 1338 aa18.09■□□□□ 0.49
LIMK1-203ENST00000435201 CEP104O60308 925 aa18.08■□□□□ 0.49
LIMK1-203ENST00000435201 USP2O75604 605 aaPredicted RBP18.08■□□□□ 0.49
LIMK1-203ENST00000435201 ZBTB48P10074 688 aaPredicted RBP18.08■□□□□ 0.49
LIMK1-203ENST00000435201 GARTP22102 1010 aa18.08■□□□□ 0.49
LIMK1-203ENST00000435201 MFAP3P55082 362 aa18.08■□□□□ 0.49
LIMK1-203ENST00000435201 BRDTQ58F21 947 aaPredicted RBP18.08■□□□□ 0.49
LIMK1-203ENST00000435201 SND1Q7KZF4 910 aaKnown RBP eCLIP18.08■□□□□ 0.49
LIMK1-203ENST00000435201 RHOT2Q8IXI1 618 aa18.08■□□□□ 0.49
LIMK1-203ENST00000435201 NLGN2Q8NFZ4 835 aa18.08■□□□□ 0.49
LIMK1-203ENST00000435201 PARD3BQ8TEW8 1205 aa18.08■□□□□ 0.49
LIMK1-203ENST00000435201 SAAL1Q96ER3 474 aa18.08■□□□□ 0.49
LIMK1-203ENST00000435201 HES6Q96HZ4 224 aa18.08■□□□□ 0.49
LIMK1-203ENST00000435201 KRT12Q99456 494 aa18.08■□□□□ 0.49
LIMK1-203ENST00000435201 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.08■□□□□ 0.492e-7■■□□□ 14.2
LIMK1-203ENST00000435201 XPNPEP1Q9NQW7 623 aa18.08■□□□□ 0.49
LIMK1-203ENST00000435201 FBXO40Q9UH90 709 aa18.08■□□□□ 0.49
LIMK1-203ENST00000435201 ADAM21Q9UKJ8 722 aa18.08■□□□□ 0.49
LIMK1-203ENST00000435201 ZC3H4Q9UPT8 1303 aaKnown RBP18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms